KEGG   PATHWAY: smi01100
Entry
smi01100                    Pathway                                
Name
Metabolic pathways - Sinorhizobium meliloti Rm41
Class
Pathway map
smi01100  Metabolic pathways
smi01100

Module
smi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:smi01100]
smi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smi01100]
smi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:smi01100]
smi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:smi01100]
smi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:smi01100]
smi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:smi01100]
smi_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:smi01100]
smi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:smi01100]
smi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smi01100]
smi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smi01100]
smi_M00012  Glyoxylate cycle [PATH:smi01100]
smi_M00015  Proline biosynthesis, glutamate => proline [PATH:smi01100]
smi_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:smi01100]
smi_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:smi01100]
smi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smi01100]
smi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smi01100]
smi_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:smi01100]
smi_M00021  Cysteine biosynthesis, serine => cysteine [PATH:smi01100]
smi_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smi01100]
smi_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:smi01100]
smi_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:smi01100]
smi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:smi01100]
smi_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:smi01100]
smi_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:smi01100]
smi_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:smi01100]
smi_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:smi01100]
smi_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smi01100]
smi_M00046  Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:smi01100]
smi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smi01100]
smi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smi01100]
smi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smi01100]
smi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smi01100]
smi_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:smi01100]
smi_M00082  Fatty acid biosynthesis, initiation [PATH:smi01100]
smi_M00083  Fatty acid biosynthesis, elongation [PATH:smi01100]
smi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:smi01100]
smi_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:smi01100]
smi_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:smi01100]
smi_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:smi01100]
smi_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:smi01100]
smi_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:smi01100]
smi_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:smi01100]
smi_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:smi01100]
smi_M00140  C1-unit interconversion, prokaryotes [PATH:smi01100]
smi_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:smi01100]
smi_M00149  Succinate dehydrogenase, prokaryotes [PATH:smi01100]
smi_M00151  Cytochrome bc1 complex respiratory unit [PATH:smi01100]
smi_M00155  Cytochrome c oxidase, prokaryotes [PATH:smi01100]
smi_M00156  Cytochrome c oxidase, cbb3-type [PATH:smi01100]
smi_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:smi01100]
smi_M00169  CAM (Crassulacean acid metabolism), light [PATH:smi01100]
smi_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:smi01100]
smi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smi01100]
smi_M00417  Cytochrome o ubiquinol oxidase [PATH:smi01100]
smi_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smi01100]
smi_M00529  Denitrification, nitrate => nitrogen [PATH:smi01100]
smi_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:smi01100]
smi_M00546  Purine degradation, xanthine => urea [PATH:smi01100]
smi_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:smi01100]
smi_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:smi01100]
smi_M00555  Betaine biosynthesis, choline => betaine [PATH:smi01100]
smi_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:smi01100]
smi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smi01100]
smi_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:smi01100]
smi_M00621  Glycine cleavage system [PATH:smi01100]
smi_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:smi01100]
smi_M00793  dTDP-L-rhamnose biosynthesis [PATH:smi01100]
smi_M00844  Arginine biosynthesis, ornithine => arginine [PATH:smi01100]
smi_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:smi01100]
smi_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smi01100]
smi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:smi01100]
smi_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:smi01100]
smi_M00919  Ectoine degradation, ectoine => aspartate [PATH:smi01100]
smi_M00925  Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:smi01100]
smi_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:smi01100]
smi_M00959  Guanine ribonucleotide degradation, GMP => Urate [PATH:smi01100]
smi_M00970  Proline degradation, proline => glutamate [PATH:smi01100]
smi_M00975  Betaine degradation, bacteria, betaine => pyruvate [PATH:smi01100]
Organism
Sinorhizobium meliloti Rm41 [GN:smi]
Related
pathway
smi00010  Glycolysis / Gluconeogenesis
smi00020  Citrate cycle (TCA cycle)
smi00030  Pentose phosphate pathway
smi00040  Pentose and glucuronate interconversions
smi00051  Fructose and mannose metabolism
smi00052  Galactose metabolism
smi00053  Ascorbate and aldarate metabolism
smi00061  Fatty acid biosynthesis
smi00071  Fatty acid degradation
smi00121  Secondary bile acid biosynthesis
smi00130  Ubiquinone and other terpenoid-quinone biosynthesis
smi00190  Oxidative phosphorylation
smi00220  Arginine biosynthesis
smi00230  Purine metabolism
smi00240  Pyrimidine metabolism
smi00250  Alanine, aspartate and glutamate metabolism
smi00260  Glycine, serine and threonine metabolism
smi00261  Monobactam biosynthesis
smi00270  Cysteine and methionine metabolism
smi00280  Valine, leucine and isoleucine degradation
smi00290  Valine, leucine and isoleucine biosynthesis
smi00300  Lysine biosynthesis
smi00310  Lysine degradation
smi00330  Arginine and proline metabolism
smi00332  Carbapenem biosynthesis
smi00340  Histidine metabolism
smi00350  Tyrosine metabolism
smi00360  Phenylalanine metabolism
smi00361  Chlorocyclohexane and chlorobenzene degradation
smi00362  Benzoate degradation
smi00364  Fluorobenzoate degradation
smi00380  Tryptophan metabolism
smi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
smi00401  Novobiocin biosynthesis
smi00410  beta-Alanine metabolism
smi00430  Taurine and hypotaurine metabolism
smi00440  Phosphonate and phosphinate metabolism
smi00450  Selenocompound metabolism
smi00460  Cyanoamino acid metabolism
smi00470  D-Amino acid metabolism
smi00480  Glutathione metabolism
smi00500  Starch and sucrose metabolism
smi00511  Other glycan degradation
smi00520  Amino sugar and nucleotide sugar metabolism
smi00521  Streptomycin biosynthesis
smi00523  Polyketide sugar unit biosynthesis
smi00525  Acarbose and validamycin biosynthesis
smi00540  Lipopolysaccharide biosynthesis
smi00541  O-Antigen nucleotide sugar biosynthesis
smi00543  Exopolysaccharide biosynthesis
smi00550  Peptidoglycan biosynthesis
smi00552  Teichoic acid biosynthesis
smi00561  Glycerolipid metabolism
smi00562  Inositol phosphate metabolism
smi00564  Glycerophospholipid metabolism
smi00600  Sphingolipid metabolism
smi00620  Pyruvate metabolism
smi00622  Xylene degradation
smi00623  Toluene degradation
smi00625  Chloroalkane and chloroalkene degradation
smi00626  Naphthalene degradation
smi00627  Aminobenzoate degradation
smi00630  Glyoxylate and dicarboxylate metabolism
smi00633  Nitrotoluene degradation
smi00640  Propanoate metabolism
smi00643  Styrene degradation
smi00650  Butanoate metabolism
smi00660  C5-Branched dibasic acid metabolism
smi00670  One carbon pool by folate
smi00680  Methane metabolism
smi00710  Carbon fixation in photosynthetic organisms
smi00730  Thiamine metabolism
smi00740  Riboflavin metabolism
smi00750  Vitamin B6 metabolism
smi00760  Nicotinate and nicotinamide metabolism
smi00770  Pantothenate and CoA biosynthesis
smi00780  Biotin metabolism
smi00785  Lipoic acid metabolism
smi00790  Folate biosynthesis
smi00791  Atrazine degradation
smi00860  Porphyrin metabolism
smi00900  Terpenoid backbone biosynthesis
smi00906  Carotenoid biosynthesis
smi00907  Pinene, camphor and geraniol degradation
smi00910  Nitrogen metabolism
smi00920  Sulfur metabolism
smi00930  Caprolactam degradation
smi00946  Degradation of flavonoids
smi00999  Biosynthesis of various plant secondary metabolites
smi01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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