PATHWAY: smuc01100 Help Entry smuc01100                   Pathway                                 Name Metabolic pathways - Skermanella mucosa Class BRITE hierarchy Pathway map smuc01100   Metabolic pathways Module smuc_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smuc01100] smuc_M00002   Glycolysis, core module involving three-carbon compounds [PATH:smuc01100] smuc_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smuc01100] smuc_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:smuc01100] smuc_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:smuc01100] smuc_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:smuc01100] smuc_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:smuc01100] smuc_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smuc01100] smuc_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smuc01100] smuc_M00012   Glyoxylate cycle [PATH:smuc01100] smuc_M00015   Proline biosynthesis, glutamate => proline [PATH:smuc01100] smuc_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:smuc01100] smuc_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:smuc01100] smuc_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smuc01100] smuc_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smuc01100] smuc_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:smuc01100] smuc_M00021   Cysteine biosynthesis, serine => cysteine [PATH:smuc01100] smuc_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smuc01100] smuc_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:smuc01100] smuc_M00026   Histidine biosynthesis, PRPP => histidine [PATH:smuc01100] smuc_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:smuc01100] smuc_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smuc01100] smuc_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:smuc01100] smuc_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smuc01100] smuc_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smuc01100] smuc_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smuc01100] smuc_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smuc01100] smuc_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:smuc01100] smuc_M00082   Fatty acid biosynthesis, initiation [PATH:smuc01100] smuc_M00083   Fatty acid biosynthesis, elongation [PATH:smuc01100] smuc_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:smuc01100] smuc_M00087   beta-Oxidation [PATH:smuc01100] smuc_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:smuc01100] smuc_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:smuc01100] smuc_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:smuc01100] smuc_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:smuc01100] smuc_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:smuc01100] smuc_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:smuc01100] smuc_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:smuc01100] smuc_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:smuc01100] smuc_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:smuc01100] smuc_M00149   Succinate dehydrogenase, prokaryotes [PATH:smuc01100] smuc_M00151   Cytochrome bc1 complex respiratory unit [PATH:smuc01100] smuc_M00155   Cytochrome c oxidase, prokaryotes [PATH:smuc01100] smuc_M00156   Cytochrome c oxidase, cbb3-type [PATH:smuc01100] smuc_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:smuc01100] smuc_M00165   Reductive pentose phosphate cycle (Calvin cycle) [PATH:smuc01100] smuc_M00168   CAM (Crassulacean acid metabolism), dark [PATH:smuc01100] smuc_M00169   CAM (Crassulacean acid metabolism), light [PATH:smuc01100] smuc_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:smuc01100] smuc_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smuc01100] smuc_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smuc01100] smuc_M00529   Denitrification, nitrate => nitrogen [PATH:smuc01100] smuc_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:smuc01100] smuc_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:smuc01100] smuc_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:smuc01100] smuc_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:smuc01100] smuc_M00555   Betaine biosynthesis, choline => betaine [PATH:smuc01100] smuc_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:smuc01100] smuc_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:smuc01100] smuc_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smuc01100] smuc_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:smuc01100] smuc_M00621   Glycine cleavage system [PATH:smuc01100] smuc_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:smuc01100] smuc_M00793   dTDP-L-rhamnose biosynthesis [PATH:smuc01100] smuc_M00844   Arginine biosynthesis, ornithine => arginine [PATH:smuc01100] smuc_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:smuc01100] smuc_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:smuc01100] smuc_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smuc01100] smuc_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:smuc01100] smuc_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:smuc01100] smuc_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:smuc01100] smuc_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:smuc01100] smuc_M00970   Proline degradation, proline => glutamate [PATH:smuc01100] smuc_M00975   Betaine degradation, bacteria, betaine => pyruvate [PATH:smuc01100] Organism Skermanella mucosa [GN:smuc] Related pathway smuc00010   Glycolysis / Gluconeogenesis smuc00020   Citrate cycle (TCA cycle) smuc00030   Pentose phosphate pathway smuc00040   Pentose and glucuronate interconversions smuc00051   Fructose and mannose metabolism smuc00052   Galactose metabolism smuc00053   Ascorbate and aldarate metabolism smuc00061   Fatty acid biosynthesis smuc00071   Fatty acid degradation smuc00074   Mycolic acid biosynthesis smuc00130   Ubiquinone and other terpenoid-quinone biosynthesis smuc00190   Oxidative phosphorylation smuc00220   Arginine biosynthesis smuc00230   Purine metabolism smuc00240   Pyrimidine metabolism smuc00250   Alanine, aspartate and glutamate metabolism smuc00260   Glycine, serine and threonine metabolism smuc00261   Monobactam biosynthesis smuc00270   Cysteine and methionine metabolism smuc00280   Valine, leucine and isoleucine degradation smuc00290   Valine, leucine and isoleucine biosynthesis smuc00300   Lysine biosynthesis smuc00310   Lysine degradation smuc00311   Penicillin and cephalosporin biosynthesis smuc00330   Arginine and proline metabolism smuc00332   Carbapenem biosynthesis smuc00340   Histidine metabolism smuc00350   Tyrosine metabolism smuc00360   Phenylalanine metabolism smuc00361   Chlorocyclohexane and chlorobenzene degradation smuc00362   Benzoate degradation smuc00364   Fluorobenzoate degradation smuc00380   Tryptophan metabolism smuc00400   Phenylalanine, tyrosine and tryptophan biosynthesis smuc00401   Novobiocin biosynthesis smuc00410   beta-Alanine metabolism smuc00430   Taurine and hypotaurine metabolism smuc00440   Phosphonate and phosphinate metabolism smuc00450   Selenocompound metabolism smuc00460   Cyanoamino acid metabolism smuc00470   D-Amino acid metabolism smuc00480   Glutathione metabolism smuc00500   Starch and sucrose metabolism smuc00520   Amino sugar and nucleotide sugar metabolism smuc00521   Streptomycin biosynthesis smuc00523   Polyketide sugar unit biosynthesis smuc00525   Acarbose and validamycin biosynthesis smuc00540   Lipopolysaccharide biosynthesis smuc00541   O-Antigen nucleotide sugar biosynthesis smuc00543   Exopolysaccharide biosynthesis smuc00550   Peptidoglycan biosynthesis smuc00552   Teichoic acid biosynthesis smuc00561   Glycerolipid metabolism smuc00562   Inositol phosphate metabolism smuc00564   Glycerophospholipid metabolism smuc00592   alpha-Linolenic acid metabolism smuc00620   Pyruvate metabolism smuc00622   Xylene degradation smuc00623   Toluene degradation smuc00625   Chloroalkane and chloroalkene degradation smuc00626   Naphthalene degradation smuc00627   Aminobenzoate degradation smuc00630   Glyoxylate and dicarboxylate metabolism smuc00633   Nitrotoluene degradation smuc00640   Propanoate metabolism smuc00643   Styrene degradation smuc00650   Butanoate metabolism smuc00660   C5-Branched dibasic acid metabolism smuc00670   One carbon pool by folate smuc00680   Methane metabolism smuc00710   Carbon fixation by Calvin cycle smuc00720   Other carbon fixation pathways smuc00730   Thiamine metabolism smuc00740   Riboflavin metabolism smuc00750   Vitamin B6 metabolism smuc00760   Nicotinate and nicotinamide metabolism smuc00770   Pantothenate and CoA biosynthesis smuc00780   Biotin metabolism smuc00785   Lipoic acid metabolism smuc00790   Folate biosynthesis smuc00791   Atrazine degradation smuc00860   Porphyrin metabolism smuc00900   Terpenoid backbone biosynthesis smuc00906   Carotenoid biosynthesis smuc00907   Pinene, camphor and geraniol degradation smuc00909   Sesquiterpenoid and triterpenoid biosynthesis smuc00910   Nitrogen metabolism smuc00920   Sulfur metabolism smuc00930   Caprolactam degradation smuc00946   Degradation of flavonoids smuc00999   Biosynthesis of various plant secondary metabolites smuc01040   Biosynthesis of unsaturated fatty acids smuc01053   Biosynthesis of siderophore group nonribosomal peptides smuc01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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