PATHWAY: smus01100 Help Entry smus01100                   Pathway                                 Name Metabolic pathways - Staphylococcus muscae Class BRITE hierarchy Pathway map smus01100   Metabolic pathways Module smus_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:smus01100] smus_M00002   Glycolysis, core module involving three-carbon compounds [PATH:smus01100] smus_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:smus01100] smus_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:smus01100] smus_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:smus01100] smus_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:smus01100] smus_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:smus01100] smus_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:smus01100] smus_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:smus01100] smus_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:smus01100] smus_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:smus01100] smus_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:smus01100] smus_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:smus01100] smus_M00021   Cysteine biosynthesis, serine => cysteine [PATH:smus01100] smus_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:smus01100] smus_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:smus01100] smus_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:smus01100] smus_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:smus01100] smus_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:smus01100] smus_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:smus01100] smus_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:smus01100] smus_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:smus01100] smus_M00082   Fatty acid biosynthesis, initiation [PATH:smus01100] smus_M00083   Fatty acid biosynthesis, elongation [PATH:smus01100] smus_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:smus01100] smus_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:smus01100] smus_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:smus01100] smus_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:smus01100] smus_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:smus01100] smus_M00140   C1-unit interconversion, prokaryotes [PATH:smus01100] smus_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:smus01100] smus_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:smus01100] smus_M00345   Formaldehyde assimilation, ribulose monophosphate pathway [PATH:smus01100] smus_M00416   Cytochrome aa3-600 menaquinol oxidase [PATH:smus01100] smus_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:smus01100] smus_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:smus01100] smus_M00555   Betaine biosynthesis, choline => betaine [PATH:smus01100] smus_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:smus01100] smus_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:smus01100] smus_M00580   Pentose phosphate pathway, archaea, fructose 6P => ribose 5P [PATH:smus01100] smus_M00621   Glycine cleavage system [PATH:smus01100] smus_M00844   Arginine biosynthesis, ornithine => arginine [PATH:smus01100] smus_M00876   Staphyloferrin A biosynthesis, L-ornithine => staphyloferrin A [PATH:smus01100] smus_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:smus01100] smus_M00883   Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:smus01100] smus_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:smus01100] smus_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:smus01100] smus_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:smus01100] smus_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:smus01100] smus_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:smus01100] smus_M00970   Proline degradation, proline => glutamate [PATH:smus01100] smus_M00972   Proline metabolism [PATH:smus01100] Organism Staphylococcus muscae [GN:smus] Related pathway smus00010   Glycolysis / Gluconeogenesis smus00020   Citrate cycle (TCA cycle) smus00030   Pentose phosphate pathway smus00040   Pentose and glucuronate interconversions smus00051   Fructose and mannose metabolism smus00052   Galactose metabolism smus00053   Ascorbate and aldarate metabolism smus00061   Fatty acid biosynthesis smus00071   Fatty acid degradation smus00074   Mycolic acid biosynthesis smus00130   Ubiquinone and other terpenoid-quinone biosynthesis smus00190   Oxidative phosphorylation smus00220   Arginine biosynthesis smus00230   Purine metabolism smus00240   Pyrimidine metabolism smus00250   Alanine, aspartate and glutamate metabolism smus00260   Glycine, serine and threonine metabolism smus00261   Monobactam biosynthesis smus00270   Cysteine and methionine metabolism smus00280   Valine, leucine and isoleucine degradation smus00290   Valine, leucine and isoleucine biosynthesis smus00300   Lysine biosynthesis smus00310   Lysine degradation smus00330   Arginine and proline metabolism smus00340   Histidine metabolism smus00350   Tyrosine metabolism smus00360   Phenylalanine metabolism smus00362   Benzoate degradation smus00380   Tryptophan metabolism smus00400   Phenylalanine, tyrosine and tryptophan biosynthesis smus00401   Novobiocin biosynthesis smus00410   beta-Alanine metabolism smus00430   Taurine and hypotaurine metabolism smus00450   Selenocompound metabolism smus00460   Cyanoamino acid metabolism smus00470   D-Amino acid metabolism smus00480   Glutathione metabolism smus00500   Starch and sucrose metabolism smus00520   Amino sugar and nucleotide sugar metabolism smus00521   Streptomycin biosynthesis smus00541   O-Antigen nucleotide sugar biosynthesis smus00542   O-Antigen repeat unit biosynthesis smus00543   Exopolysaccharide biosynthesis smus00550   Peptidoglycan biosynthesis smus00552   Teichoic acid biosynthesis smus00561   Glycerolipid metabolism smus00562   Inositol phosphate metabolism smus00564   Glycerophospholipid metabolism smus00620   Pyruvate metabolism smus00621   Dioxin degradation smus00622   Xylene degradation smus00625   Chloroalkane and chloroalkene degradation smus00626   Naphthalene degradation smus00630   Glyoxylate and dicarboxylate metabolism smus00640   Propanoate metabolism smus00650   Butanoate metabolism smus00660   C5-Branched dibasic acid metabolism smus00670   One carbon pool by folate smus00680   Methane metabolism smus00710   Carbon fixation by Calvin cycle smus00720   Other carbon fixation pathways smus00730   Thiamine metabolism smus00740   Riboflavin metabolism smus00750   Vitamin B6 metabolism smus00760   Nicotinate and nicotinamide metabolism smus00770   Pantothenate and CoA biosynthesis smus00780   Biotin metabolism smus00785   Lipoic acid metabolism smus00790   Folate biosynthesis smus00860   Porphyrin metabolism smus00900   Terpenoid backbone biosynthesis smus00910   Nitrogen metabolism smus00920   Sulfur metabolism smus00997   Biosynthesis of various other secondary metabolites smus00998   Biosynthesis of various antibiotics smus00999   Biosynthesis of various plant secondary metabolites KO pathway ko01100     LinkDB All DBs

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