PATHWAY: snap01100 Help Entry snap01100                   Pathway                                 Name Metabolic pathways - Sphingomonas naphthae Class BRITE hierarchy Pathway map snap01100   Metabolic pathways Module snap_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:snap01100] snap_M00002   Glycolysis, core module involving three-carbon compounds [PATH:snap01100] snap_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:snap01100] snap_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:snap01100] snap_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:snap01100] snap_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:snap01100] snap_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:snap01100] snap_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:snap01100] snap_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:snap01100] snap_M00012   Glyoxylate cycle [PATH:snap01100] snap_M00015   Proline biosynthesis, glutamate => proline [PATH:snap01100] snap_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:snap01100] snap_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:snap01100] snap_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:snap01100] snap_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:snap01100] snap_M00021   Cysteine biosynthesis, serine => cysteine [PATH:snap01100] snap_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:snap01100] snap_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:snap01100] snap_M00026   Histidine biosynthesis, PRPP => histidine [PATH:snap01100] snap_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:snap01100] snap_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:snap01100] snap_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:snap01100] snap_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:snap01100] snap_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:snap01100] snap_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:snap01100] snap_M00082   Fatty acid biosynthesis, initiation [PATH:snap01100] snap_M00083   Fatty acid biosynthesis, elongation [PATH:snap01100] snap_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:snap01100] snap_M00087   beta-Oxidation [PATH:snap01100] snap_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:snap01100] snap_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:snap01100] snap_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:snap01100] snap_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:snap01100] snap_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:snap01100] snap_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:snap01100] snap_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:snap01100] snap_M00140   C1-unit interconversion, prokaryotes [PATH:snap01100] snap_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:snap01100] snap_M00149   Succinate dehydrogenase, prokaryotes [PATH:snap01100] snap_M00151   Cytochrome bc1 complex respiratory unit [PATH:snap01100] snap_M00155   Cytochrome c oxidase, prokaryotes [PATH:snap01100] snap_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:snap01100] snap_M00168   CAM (Crassulacean acid metabolism), dark [PATH:snap01100] snap_M00169   CAM (Crassulacean acid metabolism), light [PATH:snap01100] snap_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:snap01100] snap_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:snap01100] snap_M00417   Cytochrome o ubiquinol oxidase [PATH:snap01100] snap_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:snap01100] snap_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:snap01100] snap_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:snap01100] snap_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:snap01100] snap_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:snap01100] snap_M00621   Glycine cleavage system [PATH:snap01100] snap_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:snap01100] snap_M00844   Arginine biosynthesis, ornithine => arginine [PATH:snap01100] snap_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:snap01100] snap_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:snap01100] snap_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:snap01100] snap_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:snap01100] snap_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:snap01100] snap_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:snap01100] snap_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:snap01100] snap_M00970   Proline degradation, proline => glutamate [PATH:snap01100] Organism Sphingomonas naphthae [GN:snap] Related pathway snap00010   Glycolysis / Gluconeogenesis snap00020   Citrate cycle (TCA cycle) snap00030   Pentose phosphate pathway snap00040   Pentose and glucuronate interconversions snap00051   Fructose and mannose metabolism snap00052   Galactose metabolism snap00053   Ascorbate and aldarate metabolism snap00061   Fatty acid biosynthesis snap00071   Fatty acid degradation snap00100   Steroid biosynthesis snap00130   Ubiquinone and other terpenoid-quinone biosynthesis snap00190   Oxidative phosphorylation snap00220   Arginine biosynthesis snap00230   Purine metabolism snap00240   Pyrimidine metabolism snap00250   Alanine, aspartate and glutamate metabolism snap00260   Glycine, serine and threonine metabolism snap00261   Monobactam biosynthesis snap00270   Cysteine and methionine metabolism snap00280   Valine, leucine and isoleucine degradation snap00290   Valine, leucine and isoleucine biosynthesis snap00300   Lysine biosynthesis snap00310   Lysine degradation snap00330   Arginine and proline metabolism snap00332   Carbapenem biosynthesis snap00340   Histidine metabolism snap00350   Tyrosine metabolism snap00360   Phenylalanine metabolism snap00361   Chlorocyclohexane and chlorobenzene degradation snap00362   Benzoate degradation snap00364   Fluorobenzoate degradation snap00365   Furfural degradation snap00380   Tryptophan metabolism snap00400   Phenylalanine, tyrosine and tryptophan biosynthesis snap00401   Novobiocin biosynthesis snap00410   beta-Alanine metabolism snap00430   Taurine and hypotaurine metabolism snap00450   Selenocompound metabolism snap00460   Cyanoamino acid metabolism snap00470   D-Amino acid metabolism snap00480   Glutathione metabolism snap00500   Starch and sucrose metabolism snap00520   Amino sugar and nucleotide sugar metabolism snap00521   Streptomycin biosynthesis snap00523   Polyketide sugar unit biosynthesis snap00525   Acarbose and validamycin biosynthesis snap00540   Lipopolysaccharide biosynthesis snap00541   O-Antigen nucleotide sugar biosynthesis snap00543   Exopolysaccharide biosynthesis snap00550   Peptidoglycan biosynthesis snap00552   Teichoic acid biosynthesis snap00561   Glycerolipid metabolism snap00562   Inositol phosphate metabolism snap00564   Glycerophospholipid metabolism snap00592   alpha-Linolenic acid metabolism snap00620   Pyruvate metabolism snap00621   Dioxin degradation snap00622   Xylene degradation snap00623   Toluene degradation snap00625   Chloroalkane and chloroalkene degradation snap00626   Naphthalene degradation snap00627   Aminobenzoate degradation snap00630   Glyoxylate and dicarboxylate metabolism snap00633   Nitrotoluene degradation snap00640   Propanoate metabolism snap00643   Styrene degradation snap00650   Butanoate metabolism snap00660   C5-Branched dibasic acid metabolism snap00670   One carbon pool by folate snap00680   Methane metabolism snap00710   Carbon fixation by Calvin cycle snap00720   Other carbon fixation pathways snap00730   Thiamine metabolism snap00740   Riboflavin metabolism snap00750   Vitamin B6 metabolism snap00760   Nicotinate and nicotinamide metabolism snap00770   Pantothenate and CoA biosynthesis snap00780   Biotin metabolism snap00785   Lipoic acid metabolism snap00790   Folate biosynthesis snap00860   Porphyrin metabolism snap00900   Terpenoid backbone biosynthesis snap00903   Limonene degradation snap00906   Carotenoid biosynthesis snap00907   Pinene, camphor and geraniol degradation snap00910   Nitrogen metabolism snap00920   Sulfur metabolism snap00930   Caprolactam degradation snap00946   Degradation of flavonoids snap00984   Steroid degradation snap00996   Biosynthesis of various alkaloids snap00999   Biosynthesis of various plant secondary metabolites snap01040   Biosynthesis of unsaturated fatty acids snap01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

DBGET integrated database retrieval system