PATHWAY: snj01100 Help Entry snj01100                    Pathway                                 Name Metabolic pathways - Sphingomonas sp. NIC1 Class BRITE hierarchy Pathway map snj01100   Metabolic pathways Module snj_M00002   Glycolysis, core module involving three-carbon compounds [PATH:snj01100] snj_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:snj01100] snj_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:snj01100] snj_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:snj01100] snj_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:snj01100] snj_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:snj01100] snj_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:snj01100] snj_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:snj01100] snj_M00012   Glyoxylate cycle [PATH:snj01100] snj_M00015   Proline biosynthesis, glutamate => proline [PATH:snj01100] snj_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:snj01100] snj_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:snj01100] snj_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:snj01100] snj_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:snj01100] snj_M00021   Cysteine biosynthesis, serine => cysteine [PATH:snj01100] snj_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:snj01100] snj_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:snj01100] snj_M00026   Histidine biosynthesis, PRPP => histidine [PATH:snj01100] snj_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:snj01100] snj_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:snj01100] snj_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:snj01100] snj_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:snj01100] snj_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:snj01100] snj_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:snj01100] snj_M00082   Fatty acid biosynthesis, initiation [PATH:snj01100] snj_M00083   Fatty acid biosynthesis, elongation [PATH:snj01100] snj_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:snj01100] snj_M00087   beta-Oxidation [PATH:snj01100] snj_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:snj01100] snj_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:snj01100] snj_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:snj01100] snj_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:snj01100] snj_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:snj01100] snj_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:snj01100] snj_M00149   Succinate dehydrogenase, prokaryotes [PATH:snj01100] snj_M00151   Cytochrome bc1 complex respiratory unit [PATH:snj01100] snj_M00155   Cytochrome c oxidase, prokaryotes [PATH:snj01100] snj_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:snj01100] snj_M00168   CAM (Crassulacean acid metabolism), dark [PATH:snj01100] snj_M00169   CAM (Crassulacean acid metabolism), light [PATH:snj01100] snj_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:snj01100] snj_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:snj01100] snj_M00417   Cytochrome o ubiquinol oxidase [PATH:snj01100] snj_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:snj01100] snj_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:snj01100] snj_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:snj01100] snj_M00555   Betaine biosynthesis, choline => betaine [PATH:snj01100] snj_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:snj01100] snj_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:snj01100] snj_M00621   Glycine cleavage system [PATH:snj01100] snj_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:snj01100] snj_M00844   Arginine biosynthesis, ornithine => arginine [PATH:snj01100] snj_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:snj01100] snj_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:snj01100] snj_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:snj01100] snj_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:snj01100] snj_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:snj01100] snj_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:snj01100] snj_M00970   Proline degradation, proline => glutamate [PATH:snj01100] Organism Sphingomonas sp. NIC1 [GN:snj] Related pathway snj00010   Glycolysis / Gluconeogenesis snj00020   Citrate cycle (TCA cycle) snj00030   Pentose phosphate pathway snj00040   Pentose and glucuronate interconversions snj00051   Fructose and mannose metabolism snj00052   Galactose metabolism snj00053   Ascorbate and aldarate metabolism snj00061   Fatty acid biosynthesis snj00071   Fatty acid degradation snj00100   Steroid biosynthesis snj00130   Ubiquinone and other terpenoid-quinone biosynthesis snj00190   Oxidative phosphorylation snj00220   Arginine biosynthesis snj00230   Purine metabolism snj00240   Pyrimidine metabolism snj00250   Alanine, aspartate and glutamate metabolism snj00260   Glycine, serine and threonine metabolism snj00261   Monobactam biosynthesis snj00270   Cysteine and methionine metabolism snj00280   Valine, leucine and isoleucine degradation snj00290   Valine, leucine and isoleucine biosynthesis snj00300   Lysine biosynthesis snj00310   Lysine degradation snj00311   Penicillin and cephalosporin biosynthesis snj00330   Arginine and proline metabolism snj00332   Carbapenem biosynthesis snj00340   Histidine metabolism snj00350   Tyrosine metabolism snj00360   Phenylalanine metabolism snj00361   Chlorocyclohexane and chlorobenzene degradation snj00362   Benzoate degradation snj00364   Fluorobenzoate degradation snj00380   Tryptophan metabolism snj00400   Phenylalanine, tyrosine and tryptophan biosynthesis snj00401   Novobiocin biosynthesis snj00405   Phenazine biosynthesis snj00410   beta-Alanine metabolism snj00430   Taurine and hypotaurine metabolism snj00450   Selenocompound metabolism snj00460   Cyanoamino acid metabolism snj00470   D-Amino acid metabolism snj00480   Glutathione metabolism snj00500   Starch and sucrose metabolism snj00511   Other glycan degradation snj00514   Other types of O-glycan biosynthesis snj00515   Mannose type O-glycan biosynthesis snj00520   Amino sugar and nucleotide sugar metabolism snj00521   Streptomycin biosynthesis snj00540   Lipopolysaccharide biosynthesis snj00541   O-Antigen nucleotide sugar biosynthesis snj00543   Exopolysaccharide biosynthesis snj00550   Peptidoglycan biosynthesis snj00552   Teichoic acid biosynthesis snj00561   Glycerolipid metabolism snj00562   Inositol phosphate metabolism snj00564   Glycerophospholipid metabolism snj00592   alpha-Linolenic acid metabolism snj00600   Sphingolipid metabolism snj00620   Pyruvate metabolism snj00623   Toluene degradation snj00625   Chloroalkane and chloroalkene degradation snj00626   Naphthalene degradation snj00627   Aminobenzoate degradation snj00630   Glyoxylate and dicarboxylate metabolism snj00633   Nitrotoluene degradation snj00640   Propanoate metabolism snj00643   Styrene degradation snj00650   Butanoate metabolism snj00660   C5-Branched dibasic acid metabolism snj00670   One carbon pool by folate snj00680   Methane metabolism snj00730   Thiamine metabolism snj00740   Riboflavin metabolism snj00750   Vitamin B6 metabolism snj00760   Nicotinate and nicotinamide metabolism snj00770   Pantothenate and CoA biosynthesis snj00780   Biotin metabolism snj00785   Lipoic acid metabolism snj00790   Folate biosynthesis snj00860   Porphyrin metabolism snj00900   Terpenoid backbone biosynthesis snj00903   Limonene degradation snj00906   Carotenoid biosynthesis snj00907   Pinene, camphor and geraniol degradation snj00910   Nitrogen metabolism snj00920   Sulfur metabolism snj00930   Caprolactam degradation snj00946   Degradation of flavonoids snj00999   Biosynthesis of various plant secondary metabolites snj01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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