KEGG   PATHWAY: sog04122
Entry
sog04122                    Pathway                                
Name
Sulfur relay system - Shewanella oncorhynchi
Description
Ubiquitin and ubiquitin-like proteins (Ubls) are signalling messengers that control many cellular functions, such as cell proliferation, apoptosis, and DNA repair. It is suggested that Ub-protein modification evolved from prokaryotic sulfurtransfer systems. Molybdenum cofactor (Moco) and thiamin are sulfur-containing cofactors whose biosynthesis includes a key sulfur transfer step that uses unique sulfur carrier proteins, MoaD and ThiS. Ubiquitin, MoaD, and ThiS are all structurally related proteins whose C-termini are activated through adenylation by homologous E1-like enzymes. s2T biosynthesis may share similar chemistry with Moco and thiamin synthesis. In Saccharomyces cerevisiae, Urm1 and Uba4 function as part of a ubl protein conjugation system, though they have sequence homology to bacterial sulfur-transfer enzymes and the ability to function in sulfur transfer.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
sog04122  Sulfur relay system
sog04122

Organism
Shewanella oncorhynchi [GN:sog]
Gene
RA178_10520  IscS subfamily cysteine desulfurase [KO:K04487] [EC:2.8.1.7]
RA178_16515  sulfurtransferase [KO:K01011] [EC:2.8.1.1 2.8.1.2]
RA178_00090  tusA; sulfurtransferase TusA [KO:K04085] [EC:2.8.1.-]
RA178_13455  sulfurtransferase TusA family protein [KO:K04085] [EC:2.8.1.-]
RA178_11570  tusB; sulfurtransferase complex subunit TusB [KO:K07237]
RA178_11575  tusC; sulfurtransferase complex subunit TusC [KO:K07236]
RA178_11580  tusD; sulfurtransferase complex subunit TusD [KO:K07235] [EC:2.8.1.-]
RA178_11565  TusE/DsrC/DsvC family sulfur relay protein [KO:K11179] [EC:2.8.1.-]
RA178_10135  mnmA; tRNA 2-thiouridine(34) synthase MnmA [KO:K00566] [EC:2.8.1.13]
RA178_01520  moaE; molybdopterin synthase catalytic subunit MoaE [KO:K03635] [EC:2.8.1.12]
RA178_01505  moaA; GTP 3',8-cyclase MoaA [KO:K03639] [EC:4.1.99.22]
RA178_21815  moaA; GTP 3',8-cyclase MoaA [KO:K03639] [EC:4.1.99.22]
RA178_01515  moaD; molybdopterin synthase sulfur carrier subunit [KO:K03636]
RA178_00685  moeB; molybdopterin-synthase adenylyltransferase MoeB [KO:K21029] [EC:2.7.7.80]
RA178_01510  moaC; cyclic pyranopterin monophosphate synthase MoaC [KO:K03637] [EC:4.6.1.17]
RA178_00370  mog; molybdopterin adenylyltransferase [KO:K03831] [EC:2.7.7.75]
RA178_15625  thiI; tRNA uracil 4-sulfurtransferase ThiI [KO:K03151] [EC:2.8.1.4]
RA178_10975  thiS; sulfur carrier protein ThiS [KO:K03154]
RA178_10970  HesA/MoeB/ThiF family protein [KO:K03148] [EC:2.7.7.73]
Compound
C00019  S-Adenosyl-L-methionine
C00041  L-Alanine
C00044  GTP
C00097  L-Cysteine
C00378  Thiamine
C00868  tRNA uridine
C00979  O-Acetyl-L-serine
C05924  Molybdopterin
C17322  tRNA containing 2-thiouridine
C18237  Molybdoenzyme molybdenum cofactor
C18239  Precursor Z
Reference
  Authors
Noma A, Sakaguchi Y, Suzuki T
  Title
Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions.
  Journal
Nucleic Acids Res 37:1335-52 (2009)
DOI:10.1093/nar/gkn1023
Reference
  Authors
Iyer LM, Burroughs AM, Aravind L
  Title
The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like beta-grasp domains.
  Journal
Genome Biol 7:R60 (2006)
DOI:10.1186/gb-2006-7-7-r60
Reference
  Authors
Schwarz G, Mendel RR, Ribbe MW
  Title
Molybdenum cofactors, enzymes and pathways.
  Journal
Nature 460:839-47 (2009)
DOI:10.1038/nature08302
Related
pathway
sog00270  Cysteine and methionine metabolism
sog00730  Thiamine metabolism
sog00790  Folate biosynthesis
KO pathway
ko04122   
LinkDB

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