KEGG   PATHWAY: sphd01100
Entry
sphd01100                   Pathway                                
Name
Metabolic pathways - Rhizorhabdus wittichii DC-6
Class
Pathway map
sphd01100  Metabolic pathways
sphd01100

Module
sphd_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:sphd01100]
sphd_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sphd01100]
sphd_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sphd01100]
sphd_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sphd01100]
sphd_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sphd01100]
sphd_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sphd01100]
sphd_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sphd01100]
sphd_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sphd01100]
sphd_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sphd01100]
sphd_M00012  Glyoxylate cycle [PATH:sphd01100]
sphd_M00015  Proline biosynthesis, glutamate => proline [PATH:sphd01100]
sphd_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sphd01100]
sphd_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sphd01100]
sphd_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sphd01100]
sphd_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sphd01100]
sphd_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sphd01100]
sphd_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sphd01100]
sphd_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sphd01100]
sphd_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sphd01100]
sphd_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sphd01100]
sphd_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sphd01100]
sphd_M00040  Tyrosine biosynthesis, chorismate => arogenate => tyrosine [PATH:sphd01100]
sphd_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:sphd01100]
sphd_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sphd01100]
sphd_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sphd01100]
sphd_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sphd01100]
sphd_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sphd01100]
sphd_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sphd01100]
sphd_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:sphd01100]
sphd_M00082  Fatty acid biosynthesis, initiation [PATH:sphd01100]
sphd_M00083  Fatty acid biosynthesis, elongation [PATH:sphd01100]
sphd_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sphd01100]
sphd_M00087  beta-Oxidation [PATH:sphd01100]
sphd_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:sphd01100]
sphd_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sphd01100]
sphd_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sphd01100]
sphd_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sphd01100]
sphd_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sphd01100]
sphd_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sphd01100]
sphd_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sphd01100]
sphd_M00134  Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:sphd01100]
sphd_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sphd01100]
sphd_M00149  Succinate dehydrogenase, prokaryotes [PATH:sphd01100]
sphd_M00151  Cytochrome bc1 complex respiratory unit [PATH:sphd01100]
sphd_M00155  Cytochrome c oxidase, prokaryotes [PATH:sphd01100]
sphd_M00156  Cytochrome c oxidase, cbb3-type [PATH:sphd01100]
sphd_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:sphd01100]
sphd_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sphd01100]
sphd_M00169  CAM (Crassulacean acid metabolism), light [PATH:sphd01100]
sphd_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:sphd01100]
sphd_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sphd01100]
sphd_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sphd01100]
sphd_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:sphd01100]
sphd_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:sphd01100]
sphd_M00555  Betaine biosynthesis, choline => betaine [PATH:sphd01100]
sphd_M00568  Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:sphd01100]
sphd_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sphd01100]
sphd_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sphd01100]
sphd_M00621  Glycine cleavage system [PATH:sphd01100]
sphd_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sphd01100]
sphd_M00793  dTDP-L-rhamnose biosynthesis [PATH:sphd01100]
sphd_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sphd01100]
sphd_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sphd01100]
sphd_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:sphd01100]
sphd_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sphd01100]
sphd_M00970  Proline degradation, proline => glutamate [PATH:sphd01100]
Organism
Rhizorhabdus wittichii DC-6 [GN:sphd]
Related
pathway
sphd00010  Glycolysis / Gluconeogenesis
sphd00020  Citrate cycle (TCA cycle)
sphd00030  Pentose phosphate pathway
sphd00040  Pentose and glucuronate interconversions
sphd00051  Fructose and mannose metabolism
sphd00052  Galactose metabolism
sphd00053  Ascorbate and aldarate metabolism
sphd00061  Fatty acid biosynthesis
sphd00071  Fatty acid degradation
sphd00121  Secondary bile acid biosynthesis
sphd00130  Ubiquinone and other terpenoid-quinone biosynthesis
sphd00190  Oxidative phosphorylation
sphd00220  Arginine biosynthesis
sphd00230  Purine metabolism
sphd00240  Pyrimidine metabolism
sphd00250  Alanine, aspartate and glutamate metabolism
sphd00260  Glycine, serine and threonine metabolism
sphd00261  Monobactam biosynthesis
sphd00270  Cysteine and methionine metabolism
sphd00280  Valine, leucine and isoleucine degradation
sphd00290  Valine, leucine and isoleucine biosynthesis
sphd00300  Lysine biosynthesis
sphd00310  Lysine degradation
sphd00330  Arginine and proline metabolism
sphd00332  Carbapenem biosynthesis
sphd00340  Histidine metabolism
sphd00350  Tyrosine metabolism
sphd00360  Phenylalanine metabolism
sphd00361  Chlorocyclohexane and chlorobenzene degradation
sphd00362  Benzoate degradation
sphd00364  Fluorobenzoate degradation
sphd00380  Tryptophan metabolism
sphd00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sphd00401  Novobiocin biosynthesis
sphd00405  Phenazine biosynthesis
sphd00410  beta-Alanine metabolism
sphd00430  Taurine and hypotaurine metabolism
sphd00450  Selenocompound metabolism
sphd00460  Cyanoamino acid metabolism
sphd00470  D-Amino acid metabolism
sphd00480  Glutathione metabolism
sphd00500  Starch and sucrose metabolism
sphd00520  Amino sugar and nucleotide sugar metabolism
sphd00521  Streptomycin biosynthesis
sphd00523  Polyketide sugar unit biosynthesis
sphd00525  Acarbose and validamycin biosynthesis
sphd00540  Lipopolysaccharide biosynthesis
sphd00541  O-Antigen nucleotide sugar biosynthesis
sphd00543  Exopolysaccharide biosynthesis
sphd00550  Peptidoglycan biosynthesis
sphd00552  Teichoic acid biosynthesis
sphd00561  Glycerolipid metabolism
sphd00562  Inositol phosphate metabolism
sphd00564  Glycerophospholipid metabolism
sphd00565  Ether lipid metabolism
sphd00592  alpha-Linolenic acid metabolism
sphd00620  Pyruvate metabolism
sphd00621  Dioxin degradation
sphd00622  Xylene degradation
sphd00623  Toluene degradation
sphd00625  Chloroalkane and chloroalkene degradation
sphd00626  Naphthalene degradation
sphd00627  Aminobenzoate degradation
sphd00630  Glyoxylate and dicarboxylate metabolism
sphd00633  Nitrotoluene degradation
sphd00640  Propanoate metabolism
sphd00643  Styrene degradation
sphd00650  Butanoate metabolism
sphd00660  C5-Branched dibasic acid metabolism
sphd00670  One carbon pool by folate
sphd00680  Methane metabolism
sphd00710  Carbon fixation by Calvin cycle
sphd00720  Other carbon fixation pathways
sphd00730  Thiamine metabolism
sphd00740  Riboflavin metabolism
sphd00750  Vitamin B6 metabolism
sphd00760  Nicotinate and nicotinamide metabolism
sphd00770  Pantothenate and CoA biosynthesis
sphd00780  Biotin metabolism
sphd00785  Lipoic acid metabolism
sphd00790  Folate biosynthesis
sphd00860  Porphyrin metabolism
sphd00900  Terpenoid backbone biosynthesis
sphd00903  Limonene degradation
sphd00906  Carotenoid biosynthesis
sphd00907  Pinene, camphor and geraniol degradation
sphd00910  Nitrogen metabolism
sphd00920  Sulfur metabolism
sphd00930  Caprolactam degradation
sphd00984  Steroid degradation
sphd00999  Biosynthesis of various plant secondary metabolites
sphd01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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