KEGG   PATHWAY: sphg01100
Entry
sphg01100                   Pathway                                
Name
Metabolic pathways - Sphingorhabdus sp. M41
Class
Pathway map
sphg01100  Metabolic pathways
sphg01100

Module
sphg_M00002  Glycolysis, core module involving three-carbon compounds [PATH:sphg01100]
sphg_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sphg01100]
sphg_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:sphg01100]
sphg_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sphg01100]
sphg_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:sphg01100]
sphg_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sphg01100]
sphg_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sphg01100]
sphg_M00012  Glyoxylate cycle [PATH:sphg01100]
sphg_M00015  Proline biosynthesis, glutamate => proline [PATH:sphg01100]
sphg_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sphg01100]
sphg_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sphg01100]
sphg_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sphg01100]
sphg_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:sphg01100]
sphg_M00021  Cysteine biosynthesis, serine => cysteine [PATH:sphg01100]
sphg_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sphg01100]
sphg_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:sphg01100]
sphg_M00026  Histidine biosynthesis, PRPP => histidine [PATH:sphg01100]
sphg_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:sphg01100]
sphg_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sphg01100]
sphg_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sphg01100]
sphg_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sphg01100]
sphg_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sphg01100]
sphg_M00082  Fatty acid biosynthesis, initiation [PATH:sphg01100]
sphg_M00083  Fatty acid biosynthesis, elongation [PATH:sphg01100]
sphg_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:sphg01100]
sphg_M00091  Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:sphg01100]
sphg_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sphg01100]
sphg_M00098  Acylglycerol degradation [PATH:sphg01100]
sphg_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sphg01100]
sphg_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:sphg01100]
sphg_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:sphg01100]
sphg_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sphg01100]
sphg_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:sphg01100]
sphg_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:sphg01100]
sphg_M00149  Succinate dehydrogenase, prokaryotes [PATH:sphg01100]
sphg_M00151  Cytochrome bc1 complex respiratory unit [PATH:sphg01100]
sphg_M00155  Cytochrome c oxidase, prokaryotes [PATH:sphg01100]
sphg_M00156  Cytochrome c oxidase, cbb3-type [PATH:sphg01100]
sphg_M00168  CAM (Crassulacean acid metabolism), dark [PATH:sphg01100]
sphg_M00169  CAM (Crassulacean acid metabolism), light [PATH:sphg01100]
sphg_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sphg01100]
sphg_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sphg01100]
sphg_M00531  Assimilatory nitrate reduction, nitrate => ammonia [PATH:sphg01100]
sphg_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sphg01100]
sphg_M00621  Glycine cleavage system [PATH:sphg01100]
sphg_M00741  Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:sphg01100]
sphg_M00844  Arginine biosynthesis, ornithine => arginine [PATH:sphg01100]
sphg_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sphg01100]
sphg_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sphg01100]
sphg_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sphg01100]
sphg_M00970  Proline degradation, proline => glutamate [PATH:sphg01100]
Organism
Sphingorhabdus sp. M41 [GN:sphg]
Related
pathway
sphg00010  Glycolysis / Gluconeogenesis
sphg00020  Citrate cycle (TCA cycle)
sphg00030  Pentose phosphate pathway
sphg00040  Pentose and glucuronate interconversions
sphg00051  Fructose and mannose metabolism
sphg00052  Galactose metabolism
sphg00053  Ascorbate and aldarate metabolism
sphg00061  Fatty acid biosynthesis
sphg00071  Fatty acid degradation
sphg00121  Secondary bile acid biosynthesis
sphg00130  Ubiquinone and other terpenoid-quinone biosynthesis
sphg00190  Oxidative phosphorylation
sphg00220  Arginine biosynthesis
sphg00230  Purine metabolism
sphg00240  Pyrimidine metabolism
sphg00250  Alanine, aspartate and glutamate metabolism
sphg00260  Glycine, serine and threonine metabolism
sphg00261  Monobactam biosynthesis
sphg00270  Cysteine and methionine metabolism
sphg00280  Valine, leucine and isoleucine degradation
sphg00290  Valine, leucine and isoleucine biosynthesis
sphg00300  Lysine biosynthesis
sphg00310  Lysine degradation
sphg00330  Arginine and proline metabolism
sphg00332  Carbapenem biosynthesis
sphg00340  Histidine metabolism
sphg00350  Tyrosine metabolism
sphg00360  Phenylalanine metabolism
sphg00361  Chlorocyclohexane and chlorobenzene degradation
sphg00362  Benzoate degradation
sphg00364  Fluorobenzoate degradation
sphg00380  Tryptophan metabolism
sphg00400  Phenylalanine, tyrosine and tryptophan biosynthesis
sphg00401  Novobiocin biosynthesis
sphg00410  beta-Alanine metabolism
sphg00430  Taurine and hypotaurine metabolism
sphg00450  Selenocompound metabolism
sphg00460  Cyanoamino acid metabolism
sphg00470  D-Amino acid metabolism
sphg00480  Glutathione metabolism
sphg00500  Starch and sucrose metabolism
sphg00520  Amino sugar and nucleotide sugar metabolism
sphg00521  Streptomycin biosynthesis
sphg00541  O-Antigen nucleotide sugar biosynthesis
sphg00543  Exopolysaccharide biosynthesis
sphg00550  Peptidoglycan biosynthesis
sphg00552  Teichoic acid biosynthesis
sphg00561  Glycerolipid metabolism
sphg00562  Inositol phosphate metabolism
sphg00564  Glycerophospholipid metabolism
sphg00565  Ether lipid metabolism
sphg00590  Arachidonic acid metabolism
sphg00620  Pyruvate metabolism
sphg00623  Toluene degradation
sphg00625  Chloroalkane and chloroalkene degradation
sphg00626  Naphthalene degradation
sphg00627  Aminobenzoate degradation
sphg00630  Glyoxylate and dicarboxylate metabolism
sphg00640  Propanoate metabolism
sphg00643  Styrene degradation
sphg00650  Butanoate metabolism
sphg00660  C5-Branched dibasic acid metabolism
sphg00670  One carbon pool by folate
sphg00680  Methane metabolism
sphg00710  Carbon fixation by Calvin cycle
sphg00720  Other carbon fixation pathways
sphg00730  Thiamine metabolism
sphg00740  Riboflavin metabolism
sphg00750  Vitamin B6 metabolism
sphg00760  Nicotinate and nicotinamide metabolism
sphg00770  Pantothenate and CoA biosynthesis
sphg00780  Biotin metabolism
sphg00785  Lipoic acid metabolism
sphg00790  Folate biosynthesis
sphg00791  Atrazine degradation
sphg00860  Porphyrin metabolism
sphg00900  Terpenoid backbone biosynthesis
sphg00903  Limonene degradation
sphg00906  Carotenoid biosynthesis
sphg00907  Pinene, camphor and geraniol degradation
sphg00910  Nitrogen metabolism
sphg00920  Sulfur metabolism
sphg00930  Caprolactam degradation
sphg00946  Degradation of flavonoids
sphg00984  Steroid degradation
sphg00996  Biosynthesis of various alkaloids
sphg00999  Biosynthesis of various plant secondary metabolites
sphg01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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