PATHWAY: spl01100 Help Entry spl01100                    Pathway                                 Name Metabolic pathways - Shewanella pealeana Class BRITE hierarchy Pathway map spl01100   Metabolic pathways Module spl_M00002   Glycolysis, core module involving three-carbon compounds [PATH:spl01100] spl_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:spl01100] spl_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:spl01100] spl_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:spl01100] spl_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:spl01100] spl_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:spl01100] spl_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:spl01100] spl_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:spl01100] spl_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:spl01100] spl_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:spl01100] spl_M00012   Glyoxylate cycle [PATH:spl01100] spl_M00015   Proline biosynthesis, glutamate => proline [PATH:spl01100] spl_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:spl01100] spl_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:spl01100] spl_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:spl01100] spl_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:spl01100] spl_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:spl01100] spl_M00021   Cysteine biosynthesis, serine => cysteine [PATH:spl01100] spl_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:spl01100] spl_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:spl01100] spl_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:spl01100] spl_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:spl01100] spl_M00026   Histidine biosynthesis, PRPP => histidine [PATH:spl01100] spl_M00027   GABA (gamma-Aminobutyrate) shunt [PATH:spl01100] spl_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:spl01100] spl_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:spl01100] spl_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:spl01100] spl_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:spl01100] spl_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:spl01100] spl_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:spl01100] spl_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:spl01100] spl_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:spl01100] spl_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:spl01100] spl_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:spl01100] spl_M00063   CMP-KDO biosynthesis [PATH:spl01100] spl_M00083   Fatty acid biosynthesis, elongation [PATH:spl01100] spl_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:spl01100] spl_M00087   beta-Oxidation [PATH:spl01100] spl_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:spl01100] spl_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:spl01100] spl_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:spl01100] spl_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:spl01100] spl_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:spl01100] spl_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:spl01100] spl_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:spl01100] spl_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:spl01100] spl_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:spl01100] spl_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:spl01100] spl_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:spl01100] spl_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:spl01100] spl_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:spl01100] spl_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:spl01100] spl_M00140   C1-unit interconversion, prokaryotes [PATH:spl01100] spl_M00149   Succinate dehydrogenase, prokaryotes [PATH:spl01100] spl_M00151   Cytochrome bc1 complex respiratory unit [PATH:spl01100] spl_M00155   Cytochrome c oxidase, prokaryotes [PATH:spl01100] spl_M00156   Cytochrome c oxidase, cbb3-type [PATH:spl01100] spl_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:spl01100] spl_M00168   CAM (Crassulacean acid metabolism), dark [PATH:spl01100] spl_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:spl01100] spl_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:spl01100] spl_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:spl01100] spl_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:spl01100] spl_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:spl01100] spl_M00555   Betaine biosynthesis, choline => betaine [PATH:spl01100] spl_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:spl01100] spl_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:spl01100] spl_M00621   Glycine cleavage system [PATH:spl01100] spl_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:spl01100] spl_M00793   dTDP-L-rhamnose biosynthesis [PATH:spl01100] spl_M00844   Arginine biosynthesis, ornithine => arginine [PATH:spl01100] spl_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:spl01100] spl_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:spl01100] spl_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:spl01100] spl_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:spl01100] spl_M00970   Proline degradation, proline => glutamate [PATH:spl01100] Organism Shewanella pealeana [GN:spl] Related pathway spl00010   Glycolysis / Gluconeogenesis spl00020   Citrate cycle (TCA cycle) spl00030   Pentose phosphate pathway spl00040   Pentose and glucuronate interconversions spl00051   Fructose and mannose metabolism spl00052   Galactose metabolism spl00053   Ascorbate and aldarate metabolism spl00061   Fatty acid biosynthesis spl00071   Fatty acid degradation spl00130   Ubiquinone and other terpenoid-quinone biosynthesis spl00190   Oxidative phosphorylation spl00220   Arginine biosynthesis spl00230   Purine metabolism spl00240   Pyrimidine metabolism spl00250   Alanine, aspartate and glutamate metabolism spl00260   Glycine, serine and threonine metabolism spl00261   Monobactam biosynthesis spl00270   Cysteine and methionine metabolism spl00280   Valine, leucine and isoleucine degradation spl00290   Valine, leucine and isoleucine biosynthesis spl00300   Lysine biosynthesis spl00310   Lysine degradation spl00330   Arginine and proline metabolism spl00332   Carbapenem biosynthesis spl00340   Histidine metabolism spl00350   Tyrosine metabolism spl00360   Phenylalanine metabolism spl00361   Chlorocyclohexane and chlorobenzene degradation spl00362   Benzoate degradation spl00364   Fluorobenzoate degradation spl00380   Tryptophan metabolism spl00400   Phenylalanine, tyrosine and tryptophan biosynthesis spl00401   Novobiocin biosynthesis spl00410   beta-Alanine metabolism spl00430   Taurine and hypotaurine metabolism spl00450   Selenocompound metabolism spl00460   Cyanoamino acid metabolism spl00470   D-Amino acid metabolism spl00480   Glutathione metabolism spl00500   Starch and sucrose metabolism spl00511   Other glycan degradation spl00520   Amino sugar and nucleotide sugar metabolism spl00521   Streptomycin biosynthesis spl00523   Polyketide sugar unit biosynthesis spl00525   Acarbose and validamycin biosynthesis spl00540   Lipopolysaccharide biosynthesis spl00541   O-Antigen nucleotide sugar biosynthesis spl00543   Exopolysaccharide biosynthesis spl00550   Peptidoglycan biosynthesis spl00552   Teichoic acid biosynthesis spl00561   Glycerolipid metabolism spl00562   Inositol phosphate metabolism spl00564   Glycerophospholipid metabolism spl00565   Ether lipid metabolism spl00590   Arachidonic acid metabolism spl00592   alpha-Linolenic acid metabolism spl00600   Sphingolipid metabolism spl00620   Pyruvate metabolism spl00621   Dioxin degradation spl00622   Xylene degradation spl00623   Toluene degradation spl00625   Chloroalkane and chloroalkene degradation spl00626   Naphthalene degradation spl00627   Aminobenzoate degradation spl00630   Glyoxylate and dicarboxylate metabolism spl00633   Nitrotoluene degradation spl00640   Propanoate metabolism spl00643   Styrene degradation spl00650   Butanoate metabolism spl00660   C5-Branched dibasic acid metabolism spl00670   One carbon pool by folate spl00680   Methane metabolism spl00710   Carbon fixation by Calvin cycle spl00720   Other carbon fixation pathways spl00730   Thiamine metabolism spl00740   Riboflavin metabolism spl00750   Vitamin B6 metabolism spl00760   Nicotinate and nicotinamide metabolism spl00770   Pantothenate and CoA biosynthesis spl00780   Biotin metabolism spl00785   Lipoic acid metabolism spl00790   Folate biosynthesis spl00860   Porphyrin metabolism spl00900   Terpenoid backbone biosynthesis spl00907   Pinene, camphor and geraniol degradation spl00910   Nitrogen metabolism spl00920   Sulfur metabolism spl00930   Caprolactam degradation spl00946   Degradation of flavonoids spl00984   Steroid degradation spl00999   Biosynthesis of various plant secondary metabolites spl01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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