KEGG   PATHWAY: srhs01100
Entry
srhs01100                   Pathway                                
Name
Metabolic pathways - Shewanella rhizosphaerae
Class
Pathway map
srhs01100  Metabolic pathways
srhs01100

Module
srhs_M00002  Glycolysis, core module involving three-carbon compounds [PATH:srhs01100]
srhs_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:srhs01100]
srhs_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:srhs01100]
srhs_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:srhs01100]
srhs_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:srhs01100]
srhs_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:srhs01100]
srhs_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:srhs01100]
srhs_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:srhs01100]
srhs_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:srhs01100]
srhs_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:srhs01100]
srhs_M00012  Glyoxylate cycle [PATH:srhs01100]
srhs_M00015  Proline biosynthesis, glutamate => proline [PATH:srhs01100]
srhs_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:srhs01100]
srhs_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:srhs01100]
srhs_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:srhs01100]
srhs_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:srhs01100]
srhs_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:srhs01100]
srhs_M00021  Cysteine biosynthesis, serine => cysteine [PATH:srhs01100]
srhs_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:srhs01100]
srhs_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:srhs01100]
srhs_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:srhs01100]
srhs_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:srhs01100]
srhs_M00026  Histidine biosynthesis, PRPP => histidine [PATH:srhs01100]
srhs_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:srhs01100]
srhs_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:srhs01100]
srhs_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:srhs01100]
srhs_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:srhs01100]
srhs_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:srhs01100]
srhs_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:srhs01100]
srhs_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:srhs01100]
srhs_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:srhs01100]
srhs_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:srhs01100]
srhs_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:srhs01100]
srhs_M00063  CMP-KDO biosynthesis [PATH:srhs01100]
srhs_M00083  Fatty acid biosynthesis, elongation [PATH:srhs01100]
srhs_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:srhs01100]
srhs_M00087  beta-Oxidation [PATH:srhs01100]
srhs_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:srhs01100]
srhs_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:srhs01100]
srhs_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:srhs01100]
srhs_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:srhs01100]
srhs_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:srhs01100]
srhs_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:srhs01100]
srhs_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:srhs01100]
srhs_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:srhs01100]
srhs_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:srhs01100]
srhs_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:srhs01100]
srhs_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:srhs01100]
srhs_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:srhs01100]
srhs_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:srhs01100]
srhs_M00133  Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:srhs01100]
srhs_M00140  C1-unit interconversion, prokaryotes [PATH:srhs01100]
srhs_M00149  Succinate dehydrogenase, prokaryotes [PATH:srhs01100]
srhs_M00151  Cytochrome bc1 complex respiratory unit [PATH:srhs01100]
srhs_M00155  Cytochrome c oxidase, prokaryotes [PATH:srhs01100]
srhs_M00156  Cytochrome c oxidase, cbb3-type [PATH:srhs01100]
srhs_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:srhs01100]
srhs_M00168  CAM (Crassulacean acid metabolism), dark [PATH:srhs01100]
srhs_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:srhs01100]
srhs_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:srhs01100]
srhs_M00417  Cytochrome o ubiquinol oxidase [PATH:srhs01100]
srhs_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:srhs01100]
srhs_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:srhs01100]
srhs_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:srhs01100]
srhs_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:srhs01100]
srhs_M00621  Glycine cleavage system [PATH:srhs01100]
srhs_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:srhs01100]
srhs_M00793  dTDP-L-rhamnose biosynthesis [PATH:srhs01100]
srhs_M00844  Arginine biosynthesis, ornithine => arginine [PATH:srhs01100]
srhs_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:srhs01100]
srhs_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:srhs01100]
srhs_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:srhs01100]
srhs_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:srhs01100]
srhs_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:srhs01100]
srhs_M00970  Proline degradation, proline => glutamate [PATH:srhs01100]
Organism
Shewanella rhizosphaerae [GN:srhs]
Related
pathway
srhs00010  Glycolysis / Gluconeogenesis
srhs00020  Citrate cycle (TCA cycle)
srhs00030  Pentose phosphate pathway
srhs00040  Pentose and glucuronate interconversions
srhs00051  Fructose and mannose metabolism
srhs00052  Galactose metabolism
srhs00053  Ascorbate and aldarate metabolism
srhs00061  Fatty acid biosynthesis
srhs00071  Fatty acid degradation
srhs00074  Mycolic acid biosynthesis
srhs00121  Secondary bile acid biosynthesis
srhs00130  Ubiquinone and other terpenoid-quinone biosynthesis
srhs00190  Oxidative phosphorylation
srhs00220  Arginine biosynthesis
srhs00230  Purine metabolism
srhs00240  Pyrimidine metabolism
srhs00250  Alanine, aspartate and glutamate metabolism
srhs00260  Glycine, serine and threonine metabolism
srhs00261  Monobactam biosynthesis
srhs00270  Cysteine and methionine metabolism
srhs00280  Valine, leucine and isoleucine degradation
srhs00290  Valine, leucine and isoleucine biosynthesis
srhs00300  Lysine biosynthesis
srhs00310  Lysine degradation
srhs00330  Arginine and proline metabolism
srhs00332  Carbapenem biosynthesis
srhs00340  Histidine metabolism
srhs00350  Tyrosine metabolism
srhs00360  Phenylalanine metabolism
srhs00361  Chlorocyclohexane and chlorobenzene degradation
srhs00362  Benzoate degradation
srhs00364  Fluorobenzoate degradation
srhs00380  Tryptophan metabolism
srhs00400  Phenylalanine, tyrosine and tryptophan biosynthesis
srhs00401  Novobiocin biosynthesis
srhs00410  beta-Alanine metabolism
srhs00430  Taurine and hypotaurine metabolism
srhs00450  Selenocompound metabolism
srhs00460  Cyanoamino acid metabolism
srhs00470  D-Amino acid metabolism
srhs00480  Glutathione metabolism
srhs00500  Starch and sucrose metabolism
srhs00511  Other glycan degradation
srhs00520  Amino sugar and nucleotide sugar metabolism
srhs00521  Streptomycin biosynthesis
srhs00523  Polyketide sugar unit biosynthesis
srhs00525  Acarbose and validamycin biosynthesis
srhs00540  Lipopolysaccharide biosynthesis
srhs00541  O-Antigen nucleotide sugar biosynthesis
srhs00542  O-Antigen repeat unit biosynthesis
srhs00543  Exopolysaccharide biosynthesis
srhs00550  Peptidoglycan biosynthesis
srhs00552  Teichoic acid biosynthesis
srhs00561  Glycerolipid metabolism
srhs00562  Inositol phosphate metabolism
srhs00564  Glycerophospholipid metabolism
srhs00565  Ether lipid metabolism
srhs00590  Arachidonic acid metabolism
srhs00592  alpha-Linolenic acid metabolism
srhs00600  Sphingolipid metabolism
srhs00620  Pyruvate metabolism
srhs00623  Toluene degradation
srhs00625  Chloroalkane and chloroalkene degradation
srhs00626  Naphthalene degradation
srhs00627  Aminobenzoate degradation
srhs00630  Glyoxylate and dicarboxylate metabolism
srhs00633  Nitrotoluene degradation
srhs00640  Propanoate metabolism
srhs00643  Styrene degradation
srhs00650  Butanoate metabolism
srhs00660  C5-Branched dibasic acid metabolism
srhs00670  One carbon pool by folate
srhs00680  Methane metabolism
srhs00710  Carbon fixation by Calvin cycle
srhs00720  Other carbon fixation pathways
srhs00730  Thiamine metabolism
srhs00740  Riboflavin metabolism
srhs00750  Vitamin B6 metabolism
srhs00760  Nicotinate and nicotinamide metabolism
srhs00770  Pantothenate and CoA biosynthesis
srhs00780  Biotin metabolism
srhs00785  Lipoic acid metabolism
srhs00790  Folate biosynthesis
srhs00860  Porphyrin metabolism
srhs00900  Terpenoid backbone biosynthesis
srhs00907  Pinene, camphor and geraniol degradation
srhs00910  Nitrogen metabolism
srhs00920  Sulfur metabolism
srhs00930  Caprolactam degradation
srhs00946  Degradation of flavonoids
srhs00999  Biosynthesis of various plant secondary metabolites
srhs01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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