PATHWAY: sse01100 Help Entry sse01100                    Pathway                                 Name Metabolic pathways - Shewanella sediminis Class BRITE hierarchy Pathway map sse01100   Metabolic pathways Module sse_M00002   Glycolysis, core module involving three-carbon compounds [PATH:sse01100] sse_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:sse01100] sse_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:sse01100] sse_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:sse01100] sse_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:sse01100] sse_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:sse01100] sse_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:sse01100] sse_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:sse01100] sse_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:sse01100] sse_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:sse01100] sse_M00012   Glyoxylate cycle [PATH:sse01100] sse_M00015   Proline biosynthesis, glutamate => proline [PATH:sse01100] sse_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:sse01100] sse_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:sse01100] sse_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:sse01100] sse_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:sse01100] sse_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:sse01100] sse_M00021   Cysteine biosynthesis, serine => cysteine [PATH:sse01100] sse_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:sse01100] sse_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:sse01100] sse_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:sse01100] sse_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:sse01100] sse_M00026   Histidine biosynthesis, PRPP => histidine [PATH:sse01100] sse_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:sse01100] sse_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:sse01100] sse_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:sse01100] sse_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:sse01100] sse_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:sse01100] sse_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:sse01100] sse_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:sse01100] sse_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:sse01100] sse_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:sse01100] sse_M00063   CMP-KDO biosynthesis [PATH:sse01100] sse_M00083   Fatty acid biosynthesis, elongation [PATH:sse01100] sse_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:sse01100] sse_M00087   beta-Oxidation [PATH:sse01100] sse_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:sse01100] sse_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:sse01100] sse_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:sse01100] sse_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:sse01100] sse_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:sse01100] sse_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:sse01100] sse_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:sse01100] sse_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:sse01100] sse_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:sse01100] sse_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:sse01100] sse_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:sse01100] sse_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:sse01100] sse_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:sse01100] sse_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:sse01100] sse_M00140   C1-unit interconversion, prokaryotes [PATH:sse01100] sse_M00149   Succinate dehydrogenase, prokaryotes [PATH:sse01100] sse_M00151   Cytochrome bc1 complex respiratory unit [PATH:sse01100] sse_M00155   Cytochrome c oxidase, prokaryotes [PATH:sse01100] sse_M00156   Cytochrome c oxidase, cbb3-type [PATH:sse01100] sse_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:sse01100] sse_M00168   CAM (Crassulacean acid metabolism), dark [PATH:sse01100] sse_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:sse01100] sse_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:sse01100] sse_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:sse01100] sse_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:sse01100] sse_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:sse01100] sse_M00555   Betaine biosynthesis, choline => betaine [PATH:sse01100] sse_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:sse01100] sse_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:sse01100] sse_M00621   Glycine cleavage system [PATH:sse01100] sse_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:sse01100] sse_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:sse01100] sse_M00793   dTDP-L-rhamnose biosynthesis [PATH:sse01100] sse_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:sse01100] sse_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:sse01100] sse_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:sse01100] sse_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:sse01100] sse_M00970   Proline degradation, proline => glutamate [PATH:sse01100] Organism Shewanella sediminis [GN:sse] Related pathway sse00010   Glycolysis / Gluconeogenesis sse00020   Citrate cycle (TCA cycle) sse00030   Pentose phosphate pathway sse00040   Pentose and glucuronate interconversions sse00051   Fructose and mannose metabolism sse00052   Galactose metabolism sse00053   Ascorbate and aldarate metabolism sse00061   Fatty acid biosynthesis sse00071   Fatty acid degradation sse00130   Ubiquinone and other terpenoid-quinone biosynthesis sse00190   Oxidative phosphorylation sse00220   Arginine biosynthesis sse00230   Purine metabolism sse00240   Pyrimidine metabolism sse00250   Alanine, aspartate and glutamate metabolism sse00260   Glycine, serine and threonine metabolism sse00261   Monobactam biosynthesis sse00270   Cysteine and methionine metabolism sse00280   Valine, leucine and isoleucine degradation sse00290   Valine, leucine and isoleucine biosynthesis sse00300   Lysine biosynthesis sse00310   Lysine degradation sse00330   Arginine and proline metabolism sse00332   Carbapenem biosynthesis sse00340   Histidine metabolism sse00350   Tyrosine metabolism sse00360   Phenylalanine metabolism sse00361   Chlorocyclohexane and chlorobenzene degradation sse00362   Benzoate degradation sse00364   Fluorobenzoate degradation sse00380   Tryptophan metabolism sse00400   Phenylalanine, tyrosine and tryptophan biosynthesis sse00401   Novobiocin biosynthesis sse00410   beta-Alanine metabolism sse00430   Taurine and hypotaurine metabolism sse00450   Selenocompound metabolism sse00460   Cyanoamino acid metabolism sse00470   D-Amino acid metabolism sse00480   Glutathione metabolism sse00500   Starch and sucrose metabolism sse00511   Other glycan degradation sse00520   Amino sugar and nucleotide sugar metabolism sse00521   Streptomycin biosynthesis sse00523   Polyketide sugar unit biosynthesis sse00525   Acarbose and validamycin biosynthesis sse00540   Lipopolysaccharide biosynthesis sse00541   O-Antigen nucleotide sugar biosynthesis sse00542   O-Antigen repeat unit biosynthesis sse00543   Exopolysaccharide biosynthesis sse00550   Peptidoglycan biosynthesis sse00552   Teichoic acid biosynthesis sse00561   Glycerolipid metabolism sse00562   Inositol phosphate metabolism sse00564   Glycerophospholipid metabolism sse00565   Ether lipid metabolism sse00590   Arachidonic acid metabolism sse00592   alpha-Linolenic acid metabolism sse00600   Sphingolipid metabolism sse00620   Pyruvate metabolism sse00623   Toluene degradation sse00625   Chloroalkane and chloroalkene degradation sse00626   Naphthalene degradation sse00627   Aminobenzoate degradation sse00630   Glyoxylate and dicarboxylate metabolism sse00633   Nitrotoluene degradation sse00640   Propanoate metabolism sse00643   Styrene degradation sse00650   Butanoate metabolism sse00660   C5-Branched dibasic acid metabolism sse00670   One carbon pool by folate sse00680   Methane metabolism sse00710   Carbon fixation by Calvin cycle sse00720   Other carbon fixation pathways sse00730   Thiamine metabolism sse00740   Riboflavin metabolism sse00750   Vitamin B6 metabolism sse00760   Nicotinate and nicotinamide metabolism sse00770   Pantothenate and CoA biosynthesis sse00780   Biotin metabolism sse00785   Lipoic acid metabolism sse00790   Folate biosynthesis sse00860   Porphyrin metabolism sse00900   Terpenoid backbone biosynthesis sse00903   Limonene degradation sse00907   Pinene, camphor and geraniol degradation sse00910   Nitrogen metabolism sse00920   Sulfur metabolism sse00930   Caprolactam degradation sse00999   Biosynthesis of various plant secondary metabolites sse01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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