PATHWAY: svo01100 Help Entry svo01100                    Pathway                                 Name Metabolic pathways - Shewanella violacea Class BRITE hierarchy Pathway map svo01100   Metabolic pathways Module svo_M00002   Glycolysis, core module involving three-carbon compounds [PATH:svo01100] svo_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:svo01100] svo_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:svo01100] svo_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:svo01100] svo_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:svo01100] svo_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:svo01100] svo_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:svo01100] svo_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:svo01100] svo_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:svo01100] svo_M00012   Glyoxylate cycle [PATH:svo01100] svo_M00015   Proline biosynthesis, glutamate => proline [PATH:svo01100] svo_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:svo01100] svo_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:svo01100] svo_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:svo01100] svo_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:svo01100] svo_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:svo01100] svo_M00021   Cysteine biosynthesis, serine => cysteine [PATH:svo01100] svo_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:svo01100] svo_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:svo01100] svo_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:svo01100] svo_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:svo01100] svo_M00026   Histidine biosynthesis, PRPP => histidine [PATH:svo01100] svo_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:svo01100] svo_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:svo01100] svo_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:svo01100] svo_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:svo01100] svo_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:svo01100] svo_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:svo01100] svo_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:svo01100] svo_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:svo01100] svo_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:svo01100] svo_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:svo01100] svo_M00063   CMP-KDO biosynthesis [PATH:svo01100] svo_M00083   Fatty acid biosynthesis, elongation [PATH:svo01100] svo_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:svo01100] svo_M00087   beta-Oxidation [PATH:svo01100] svo_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:svo01100] svo_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:svo01100] svo_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:svo01100] svo_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:svo01100] svo_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:svo01100] svo_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:svo01100] svo_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:svo01100] svo_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:svo01100] svo_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:svo01100] svo_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:svo01100] svo_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:svo01100] svo_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:svo01100] svo_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:svo01100] svo_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:svo01100] svo_M00140   C1-unit interconversion, prokaryotes [PATH:svo01100] svo_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:svo01100] svo_M00149   Succinate dehydrogenase, prokaryotes [PATH:svo01100] svo_M00151   Cytochrome bc1 complex respiratory unit [PATH:svo01100] svo_M00155   Cytochrome c oxidase, prokaryotes [PATH:svo01100] svo_M00156   Cytochrome c oxidase, cbb3-type [PATH:svo01100] svo_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:svo01100] svo_M00168   CAM (Crassulacean acid metabolism), dark [PATH:svo01100] svo_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:svo01100] svo_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:svo01100] svo_M00417   Cytochrome o ubiquinol oxidase [PATH:svo01100] svo_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:svo01100] svo_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:svo01100] svo_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:svo01100] svo_M00555   Betaine biosynthesis, choline => betaine [PATH:svo01100] svo_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:svo01100] svo_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:svo01100] svo_M00621   Glycine cleavage system [PATH:svo01100] svo_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:svo01100] svo_M00793   dTDP-L-rhamnose biosynthesis [PATH:svo01100] svo_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:svo01100] svo_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:svo01100] svo_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:svo01100] svo_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:svo01100] svo_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:svo01100] svo_M00970   Proline degradation, proline => glutamate [PATH:svo01100] Organism Shewanella violacea [GN:svo] Related pathway svo00010   Glycolysis / Gluconeogenesis svo00020   Citrate cycle (TCA cycle) svo00030   Pentose phosphate pathway svo00040   Pentose and glucuronate interconversions svo00051   Fructose and mannose metabolism svo00052   Galactose metabolism svo00053   Ascorbate and aldarate metabolism svo00061   Fatty acid biosynthesis svo00071   Fatty acid degradation svo00074   Mycolic acid biosynthesis svo00130   Ubiquinone and other terpenoid-quinone biosynthesis svo00190   Oxidative phosphorylation svo00220   Arginine biosynthesis svo00230   Purine metabolism svo00240   Pyrimidine metabolism svo00250   Alanine, aspartate and glutamate metabolism svo00260   Glycine, serine and threonine metabolism svo00261   Monobactam biosynthesis svo00270   Cysteine and methionine metabolism svo00280   Valine, leucine and isoleucine degradation svo00290   Valine, leucine and isoleucine biosynthesis svo00300   Lysine biosynthesis svo00310   Lysine degradation svo00330   Arginine and proline metabolism svo00332   Carbapenem biosynthesis svo00340   Histidine metabolism svo00350   Tyrosine metabolism svo00360   Phenylalanine metabolism svo00361   Chlorocyclohexane and chlorobenzene degradation svo00362   Benzoate degradation svo00364   Fluorobenzoate degradation svo00380   Tryptophan metabolism svo00400   Phenylalanine, tyrosine and tryptophan biosynthesis svo00401   Novobiocin biosynthesis svo00405   Phenazine biosynthesis svo00410   beta-Alanine metabolism svo00430   Taurine and hypotaurine metabolism svo00450   Selenocompound metabolism svo00460   Cyanoamino acid metabolism svo00470   D-Amino acid metabolism svo00480   Glutathione metabolism svo00500   Starch and sucrose metabolism svo00511   Other glycan degradation svo00520   Amino sugar and nucleotide sugar metabolism svo00521   Streptomycin biosynthesis svo00523   Polyketide sugar unit biosynthesis svo00525   Acarbose and validamycin biosynthesis svo00540   Lipopolysaccharide biosynthesis svo00541   O-Antigen nucleotide sugar biosynthesis svo00543   Exopolysaccharide biosynthesis svo00550   Peptidoglycan biosynthesis svo00552   Teichoic acid biosynthesis svo00561   Glycerolipid metabolism svo00562   Inositol phosphate metabolism svo00564   Glycerophospholipid metabolism svo00565   Ether lipid metabolism svo00590   Arachidonic acid metabolism svo00592   alpha-Linolenic acid metabolism svo00600   Sphingolipid metabolism svo00620   Pyruvate metabolism svo00623   Toluene degradation svo00625   Chloroalkane and chloroalkene degradation svo00626   Naphthalene degradation svo00627   Aminobenzoate degradation svo00630   Glyoxylate and dicarboxylate metabolism svo00633   Nitrotoluene degradation svo00640   Propanoate metabolism svo00643   Styrene degradation svo00650   Butanoate metabolism svo00660   C5-Branched dibasic acid metabolism svo00670   One carbon pool by folate svo00680   Methane metabolism svo00710   Carbon fixation by Calvin cycle svo00720   Other carbon fixation pathways svo00730   Thiamine metabolism svo00740   Riboflavin metabolism svo00750   Vitamin B6 metabolism svo00760   Nicotinate and nicotinamide metabolism svo00770   Pantothenate and CoA biosynthesis svo00780   Biotin metabolism svo00785   Lipoic acid metabolism svo00790   Folate biosynthesis svo00860   Porphyrin metabolism svo00900   Terpenoid backbone biosynthesis svo00907   Pinene, camphor and geraniol degradation svo00910   Nitrogen metabolism svo00920   Sulfur metabolism svo00930   Caprolactam degradation svo00946   Degradation of flavonoids svo00999   Biosynthesis of various plant secondary metabolites svo01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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