KEGG   PATHWAY: syi01100
Entry
syi01100                    Pathway                                
Name
Metabolic pathways - Sediminicola sp. YIK13
Class
Pathway map
syi01100  Metabolic pathways
syi01100

Module
syi_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:syi01100]
syi_M00002  Glycolysis, core module involving three-carbon compounds [PATH:syi01100]
syi_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:syi01100]
syi_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:syi01100]
syi_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:syi01100]
syi_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:syi01100]
syi_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:syi01100]
syi_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:syi01100]
syi_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:syi01100]
syi_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:syi01100]
syi_M00012  Glyoxylate cycle [PATH:syi01100]
syi_M00015  Proline biosynthesis, glutamate => proline [PATH:syi01100]
syi_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:syi01100]
syi_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:syi01100]
syi_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:syi01100]
syi_M00026  Histidine biosynthesis, PRPP => histidine [PATH:syi01100]
syi_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:syi01100]
syi_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:syi01100]
syi_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:syi01100]
syi_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:syi01100]
syi_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:syi01100]
syi_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:syi01100]
syi_M00063  CMP-KDO biosynthesis [PATH:syi01100]
syi_M00082  Fatty acid biosynthesis, initiation [PATH:syi01100]
syi_M00083  Fatty acid biosynthesis, elongation [PATH:syi01100]
syi_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:syi01100]
syi_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:syi01100]
syi_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:syi01100]
syi_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:syi01100]
syi_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:syi01100]
syi_M00155  Cytochrome c oxidase, prokaryotes [PATH:syi01100]
syi_M00156  Cytochrome c oxidase, cbb3-type [PATH:syi01100]
syi_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:syi01100]
syi_M00168  CAM (Crassulacean acid metabolism), dark [PATH:syi01100]
syi_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:syi01100]
syi_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:syi01100]
syi_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:syi01100]
syi_M00535  Isoleucine biosynthesis, pyruvate => 2-oxobutanoate [PATH:syi01100]
syi_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:syi01100]
syi_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:syi01100]
syi_M00621  Glycine cleavage system [PATH:syi01100]
syi_M00793  dTDP-L-rhamnose biosynthesis [PATH:syi01100]
syi_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:syi01100]
syi_M00970  Proline degradation, proline => glutamate [PATH:syi01100]
syi_M00972  Proline metabolism [PATH:syi01100]
Organism
Sediminicola sp. YIK13 [GN:syi]
Related
pathway
syi00010  Glycolysis / Gluconeogenesis
syi00020  Citrate cycle (TCA cycle)
syi00030  Pentose phosphate pathway
syi00040  Pentose and glucuronate interconversions
syi00051  Fructose and mannose metabolism
syi00052  Galactose metabolism
syi00053  Ascorbate and aldarate metabolism
syi00061  Fatty acid biosynthesis
syi00071  Fatty acid degradation
syi00074  Mycolic acid biosynthesis
syi00130  Ubiquinone and other terpenoid-quinone biosynthesis
syi00190  Oxidative phosphorylation
syi00220  Arginine biosynthesis
syi00230  Purine metabolism
syi00240  Pyrimidine metabolism
syi00250  Alanine, aspartate and glutamate metabolism
syi00260  Glycine, serine and threonine metabolism
syi00261  Monobactam biosynthesis
syi00270  Cysteine and methionine metabolism
syi00280  Valine, leucine and isoleucine degradation
syi00290  Valine, leucine and isoleucine biosynthesis
syi00300  Lysine biosynthesis
syi00310  Lysine degradation
syi00311  Penicillin and cephalosporin biosynthesis
syi00330  Arginine and proline metabolism
syi00332  Carbapenem biosynthesis
syi00340  Histidine metabolism
syi00350  Tyrosine metabolism
syi00360  Phenylalanine metabolism
syi00361  Chlorocyclohexane and chlorobenzene degradation
syi00362  Benzoate degradation
syi00364  Fluorobenzoate degradation
syi00380  Tryptophan metabolism
syi00400  Phenylalanine, tyrosine and tryptophan biosynthesis
syi00401  Novobiocin biosynthesis
syi00410  beta-Alanine metabolism
syi00430  Taurine and hypotaurine metabolism
syi00450  Selenocompound metabolism
syi00460  Cyanoamino acid metabolism
syi00470  D-Amino acid metabolism
syi00480  Glutathione metabolism
syi00500  Starch and sucrose metabolism
syi00511  Other glycan degradation
syi00520  Amino sugar and nucleotide sugar metabolism
syi00521  Streptomycin biosynthesis
syi00523  Polyketide sugar unit biosynthesis
syi00525  Acarbose and validamycin biosynthesis
syi00540  Lipopolysaccharide biosynthesis
syi00541  O-Antigen nucleotide sugar biosynthesis
syi00543  Exopolysaccharide biosynthesis
syi00550  Peptidoglycan biosynthesis
syi00552  Teichoic acid biosynthesis
syi00561  Glycerolipid metabolism
syi00564  Glycerophospholipid metabolism
syi00592  alpha-Linolenic acid metabolism
syi00600  Sphingolipid metabolism
syi00620  Pyruvate metabolism
syi00623  Toluene degradation
syi00625  Chloroalkane and chloroalkene degradation
syi00626  Naphthalene degradation
syi00630  Glyoxylate and dicarboxylate metabolism
syi00633  Nitrotoluene degradation
syi00640  Propanoate metabolism
syi00643  Styrene degradation
syi00650  Butanoate metabolism
syi00660  C5-Branched dibasic acid metabolism
syi00670  One carbon pool by folate
syi00680  Methane metabolism
syi00710  Carbon fixation by Calvin cycle
syi00720  Other carbon fixation pathways
syi00730  Thiamine metabolism
syi00740  Riboflavin metabolism
syi00750  Vitamin B6 metabolism
syi00760  Nicotinate and nicotinamide metabolism
syi00770  Pantothenate and CoA biosynthesis
syi00780  Biotin metabolism
syi00785  Lipoic acid metabolism
syi00790  Folate biosynthesis
syi00860  Porphyrin metabolism
syi00900  Terpenoid backbone biosynthesis
syi00906  Carotenoid biosynthesis
syi00907  Pinene, camphor and geraniol degradation
syi00910  Nitrogen metabolism
syi00920  Sulfur metabolism
syi00946  Degradation of flavonoids
syi00999  Biosynthesis of various plant secondary metabolites
syi01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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