KEGG   PATHWAY: syk01100
Entry
syk01100                    Pathway                                
Name
Metabolic pathways - Shewanella yunxiaonensis
Class
Pathway map
syk01100  Metabolic pathways
syk01100

Module
syk_M00002  Glycolysis, core module involving three-carbon compounds [PATH:syk01100]
syk_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:syk01100]
syk_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:syk01100]
syk_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:syk01100]
syk_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:syk01100]
syk_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:syk01100]
syk_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:syk01100]
syk_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:syk01100]
syk_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:syk01100]
syk_M00012  Glyoxylate cycle [PATH:syk01100]
syk_M00015  Proline biosynthesis, glutamate => proline [PATH:syk01100]
syk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:syk01100]
syk_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:syk01100]
syk_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:syk01100]
syk_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:syk01100]
syk_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:syk01100]
syk_M00021  Cysteine biosynthesis, serine => cysteine [PATH:syk01100]
syk_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:syk01100]
syk_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:syk01100]
syk_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:syk01100]
syk_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:syk01100]
syk_M00026  Histidine biosynthesis, PRPP => histidine [PATH:syk01100]
syk_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:syk01100]
syk_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:syk01100]
syk_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:syk01100]
syk_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:syk01100]
syk_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:syk01100]
syk_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:syk01100]
syk_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:syk01100]
syk_M00063  CMP-KDO biosynthesis [PATH:syk01100]
syk_M00083  Fatty acid biosynthesis, elongation [PATH:syk01100]
syk_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:syk01100]
syk_M00087  beta-Oxidation [PATH:syk01100]
syk_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:syk01100]
syk_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:syk01100]
syk_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:syk01100]
syk_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:syk01100]
syk_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:syk01100]
syk_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:syk01100]
syk_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:syk01100]
syk_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:syk01100]
syk_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:syk01100]
syk_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:syk01100]
syk_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:syk01100]
syk_M00140  C1-unit interconversion, prokaryotes [PATH:syk01100]
syk_M00149  Succinate dehydrogenase, prokaryotes [PATH:syk01100]
syk_M00150  Fumarate reductase, prokaryotes [PATH:syk01100]
syk_M00151  Cytochrome bc1 complex respiratory unit [PATH:syk01100]
syk_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:syk01100]
syk_M00168  CAM (Crassulacean acid metabolism), dark [PATH:syk01100]
syk_M00175  Nitrogen fixation, nitrogen => ammonia [PATH:syk01100]
syk_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:syk01100]
syk_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:syk01100]
syk_M00417  Cytochrome o ubiquinol oxidase [PATH:syk01100]
syk_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:syk01100]
syk_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:syk01100]
syk_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:syk01100]
syk_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:syk01100]
syk_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:syk01100]
syk_M00621  Glycine cleavage system [PATH:syk01100]
syk_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:syk01100]
syk_M00793  dTDP-L-rhamnose biosynthesis [PATH:syk01100]
syk_M00844  Arginine biosynthesis, ornithine => arginine [PATH:syk01100]
syk_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:syk01100]
syk_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:syk01100]
syk_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:syk01100]
syk_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:syk01100]
syk_M00970  Proline degradation, proline => glutamate [PATH:syk01100]
Organism
Shewanella yunxiaonensis [GN:syk]
Related
pathway
syk00010  Glycolysis / Gluconeogenesis
syk00020  Citrate cycle (TCA cycle)
syk00030  Pentose phosphate pathway
syk00040  Pentose and glucuronate interconversions
syk00051  Fructose and mannose metabolism
syk00052  Galactose metabolism
syk00053  Ascorbate and aldarate metabolism
syk00061  Fatty acid biosynthesis
syk00071  Fatty acid degradation
syk00130  Ubiquinone and other terpenoid-quinone biosynthesis
syk00190  Oxidative phosphorylation
syk00220  Arginine biosynthesis
syk00230  Purine metabolism
syk00240  Pyrimidine metabolism
syk00250  Alanine, aspartate and glutamate metabolism
syk00260  Glycine, serine and threonine metabolism
syk00261  Monobactam biosynthesis
syk00270  Cysteine and methionine metabolism
syk00280  Valine, leucine and isoleucine degradation
syk00290  Valine, leucine and isoleucine biosynthesis
syk00300  Lysine biosynthesis
syk00310  Lysine degradation
syk00330  Arginine and proline metabolism
syk00332  Carbapenem biosynthesis
syk00340  Histidine metabolism
syk00350  Tyrosine metabolism
syk00360  Phenylalanine metabolism
syk00361  Chlorocyclohexane and chlorobenzene degradation
syk00362  Benzoate degradation
syk00364  Fluorobenzoate degradation
syk00380  Tryptophan metabolism
syk00400  Phenylalanine, tyrosine and tryptophan biosynthesis
syk00401  Novobiocin biosynthesis
syk00410  beta-Alanine metabolism
syk00430  Taurine and hypotaurine metabolism
syk00450  Selenocompound metabolism
syk00460  Cyanoamino acid metabolism
syk00470  D-Amino acid metabolism
syk00480  Glutathione metabolism
syk00500  Starch and sucrose metabolism
syk00511  Other glycan degradation
syk00520  Amino sugar and nucleotide sugar metabolism
syk00521  Streptomycin biosynthesis
syk00523  Polyketide sugar unit biosynthesis
syk00525  Acarbose and validamycin biosynthesis
syk00540  Lipopolysaccharide biosynthesis
syk00541  O-Antigen nucleotide sugar biosynthesis
syk00543  Exopolysaccharide biosynthesis
syk00550  Peptidoglycan biosynthesis
syk00552  Teichoic acid biosynthesis
syk00561  Glycerolipid metabolism
syk00562  Inositol phosphate metabolism
syk00564  Glycerophospholipid metabolism
syk00565  Ether lipid metabolism
syk00590  Arachidonic acid metabolism
syk00592  alpha-Linolenic acid metabolism
syk00620  Pyruvate metabolism
syk00622  Xylene degradation
syk00623  Toluene degradation
syk00625  Chloroalkane and chloroalkene degradation
syk00626  Naphthalene degradation
syk00627  Aminobenzoate degradation
syk00630  Glyoxylate and dicarboxylate metabolism
syk00633  Nitrotoluene degradation
syk00640  Propanoate metabolism
syk00650  Butanoate metabolism
syk00660  C5-Branched dibasic acid metabolism
syk00670  One carbon pool by folate
syk00680  Methane metabolism
syk00710  Carbon fixation by Calvin cycle
syk00720  Other carbon fixation pathways
syk00730  Thiamine metabolism
syk00740  Riboflavin metabolism
syk00750  Vitamin B6 metabolism
syk00760  Nicotinate and nicotinamide metabolism
syk00770  Pantothenate and CoA biosynthesis
syk00780  Biotin metabolism
syk00785  Lipoic acid metabolism
syk00790  Folate biosynthesis
syk00860  Porphyrin metabolism
syk00900  Terpenoid backbone biosynthesis
syk00907  Pinene, camphor and geraniol degradation
syk00910  Nitrogen metabolism
syk00920  Sulfur metabolism
syk00930  Caprolactam degradation
syk00999  Biosynthesis of various plant secondary metabolites
syk01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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