PATHWAY: tlc01100 Help Entry tlc01100                    Pathway                                 Name Metabolic pathways - Thiothrix lacustris Class BRITE hierarchy Pathway map tlc01100   Metabolic pathways Module tlc_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:tlc01100] tlc_M00002   Glycolysis, core module involving three-carbon compounds [PATH:tlc01100] tlc_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tlc01100] tlc_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tlc01100] tlc_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:tlc01100] tlc_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tlc01100] tlc_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tlc01100] tlc_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:tlc01100] tlc_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tlc01100] tlc_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:tlc01100] tlc_M00015   Proline biosynthesis, glutamate => proline [PATH:tlc01100] tlc_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:tlc01100] tlc_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:tlc01100] tlc_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:tlc01100] tlc_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tlc01100] tlc_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:tlc01100] tlc_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:tlc01100] tlc_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:tlc01100] tlc_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tlc01100] tlc_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:tlc01100] tlc_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tlc01100] tlc_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:tlc01100] tlc_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:tlc01100] tlc_M00063   CMP-KDO biosynthesis [PATH:tlc01100] tlc_M00082   Fatty acid biosynthesis, initiation [PATH:tlc01100] tlc_M00083   Fatty acid biosynthesis, elongation [PATH:tlc01100] tlc_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:tlc01100] tlc_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:tlc01100] tlc_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:tlc01100] tlc_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:tlc01100] tlc_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:tlc01100] tlc_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:tlc01100] tlc_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:tlc01100] tlc_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:tlc01100] tlc_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:tlc01100] tlc_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tlc01100] tlc_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:tlc01100] tlc_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:tlc01100] tlc_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:tlc01100] tlc_M00149   Succinate dehydrogenase, prokaryotes [PATH:tlc01100] tlc_M00151   Cytochrome bc1 complex respiratory unit [PATH:tlc01100] tlc_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:tlc01100] tlc_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tlc01100] tlc_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:tlc01100] tlc_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:tlc01100] tlc_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:tlc01100] tlc_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:tlc01100] tlc_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:tlc01100] tlc_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:tlc01100] tlc_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:tlc01100] tlc_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:tlc01100] tlc_M00596   Dissimilatory sulfate reduction, sulfate => H2S [PATH:tlc01100] tlc_M00621   Glycine cleavage system [PATH:tlc01100] tlc_M00793   dTDP-L-rhamnose biosynthesis [PATH:tlc01100] tlc_M00844   Arginine biosynthesis, ornithine => arginine [PATH:tlc01100] tlc_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:tlc01100] tlc_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:tlc01100] tlc_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tlc01100] tlc_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:tlc01100] tlc_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:tlc01100] tlc_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:tlc01100] Organism Thiothrix lacustris [GN:tlc] Related pathway tlc00010   Glycolysis / Gluconeogenesis tlc00020   Citrate cycle (TCA cycle) tlc00030   Pentose phosphate pathway tlc00040   Pentose and glucuronate interconversions tlc00051   Fructose and mannose metabolism tlc00052   Galactose metabolism tlc00053   Ascorbate and aldarate metabolism tlc00061   Fatty acid biosynthesis tlc00071   Fatty acid degradation tlc00130   Ubiquinone and other terpenoid-quinone biosynthesis tlc00190   Oxidative phosphorylation tlc00220   Arginine biosynthesis tlc00230   Purine metabolism tlc00240   Pyrimidine metabolism tlc00250   Alanine, aspartate and glutamate metabolism tlc00260   Glycine, serine and threonine metabolism tlc00261   Monobactam biosynthesis tlc00270   Cysteine and methionine metabolism tlc00280   Valine, leucine and isoleucine degradation tlc00290   Valine, leucine and isoleucine biosynthesis tlc00300   Lysine biosynthesis tlc00310   Lysine degradation tlc00330   Arginine and proline metabolism tlc00332   Carbapenem biosynthesis tlc00340   Histidine metabolism tlc00350   Tyrosine metabolism tlc00360   Phenylalanine metabolism tlc00361   Chlorocyclohexane and chlorobenzene degradation tlc00362   Benzoate degradation tlc00364   Fluorobenzoate degradation tlc00380   Tryptophan metabolism tlc00400   Phenylalanine, tyrosine and tryptophan biosynthesis tlc00401   Novobiocin biosynthesis tlc00410   beta-Alanine metabolism tlc00430   Taurine and hypotaurine metabolism tlc00450   Selenocompound metabolism tlc00460   Cyanoamino acid metabolism tlc00470   D-Amino acid metabolism tlc00480   Glutathione metabolism tlc00500   Starch and sucrose metabolism tlc00520   Amino sugar and nucleotide sugar metabolism tlc00521   Streptomycin biosynthesis tlc00523   Polyketide sugar unit biosynthesis tlc00525   Acarbose and validamycin biosynthesis tlc00540   Lipopolysaccharide biosynthesis tlc00541   O-Antigen nucleotide sugar biosynthesis tlc00542   O-Antigen repeat unit biosynthesis tlc00543   Exopolysaccharide biosynthesis tlc00550   Peptidoglycan biosynthesis tlc00552   Teichoic acid biosynthesis tlc00561   Glycerolipid metabolism tlc00562   Inositol phosphate metabolism tlc00564   Glycerophospholipid metabolism tlc00592   alpha-Linolenic acid metabolism tlc00620   Pyruvate metabolism tlc00623   Toluene degradation tlc00625   Chloroalkane and chloroalkene degradation tlc00626   Naphthalene degradation tlc00630   Glyoxylate and dicarboxylate metabolism tlc00633   Nitrotoluene degradation tlc00640   Propanoate metabolism tlc00650   Butanoate metabolism tlc00660   C5-Branched dibasic acid metabolism tlc00670   One carbon pool by folate tlc00680   Methane metabolism tlc00710   Carbon fixation by Calvin cycle tlc00720   Other carbon fixation pathways tlc00730   Thiamine metabolism tlc00740   Riboflavin metabolism tlc00750   Vitamin B6 metabolism tlc00760   Nicotinate and nicotinamide metabolism tlc00770   Pantothenate and CoA biosynthesis tlc00780   Biotin metabolism tlc00785   Lipoic acid metabolism tlc00790   Folate biosynthesis tlc00860   Porphyrin metabolism tlc00900   Terpenoid backbone biosynthesis tlc00907   Pinene, camphor and geraniol degradation tlc00910   Nitrogen metabolism tlc00920   Sulfur metabolism tlc00999   Biosynthesis of various plant secondary metabolites tlc01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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