PATHWAY: tri01100 Help Entry tri01100                    Pathway                                 Name Metabolic pathways - Treponema ruminis Class BRITE hierarchy Pathway map tri01100   Metabolic pathways Module tri_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:tri01100] tri_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tri01100] tri_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:tri01100] tri_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:tri01100] tri_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:tri01100] tri_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:tri01100] tri_M00021   Cysteine biosynthesis, serine => cysteine [PATH:tri01100] tri_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tri01100] tri_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:tri01100] tri_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:tri01100] tri_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tri01100] tri_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tri01100] tri_M00083   Fatty acid biosynthesis, elongation [PATH:tri01100] tri_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:tri01100] tri_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:tri01100] tri_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:tri01100] tri_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:tri01100] tri_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:tri01100] tri_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tri01100] tri_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:tri01100] tri_M00140   C1-unit interconversion, prokaryotes [PATH:tri01100] tri_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:tri01100] tri_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tri01100] tri_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:tri01100] tri_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:tri01100] tri_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:tri01100] tri_M00793   dTDP-L-rhamnose biosynthesis [PATH:tri01100] tri_M00844   Arginine biosynthesis, ornithine => arginine [PATH:tri01100] tri_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:tri01100] tri_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:tri01100] tri_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:tri01100] Organism Treponema ruminis [GN:tri] Related pathway tri00010   Glycolysis / Gluconeogenesis tri00020   Citrate cycle (TCA cycle) tri00030   Pentose phosphate pathway tri00040   Pentose and glucuronate interconversions tri00051   Fructose and mannose metabolism tri00052   Galactose metabolism tri00053   Ascorbate and aldarate metabolism tri00061   Fatty acid biosynthesis tri00071   Fatty acid degradation tri00130   Ubiquinone and other terpenoid-quinone biosynthesis tri00190   Oxidative phosphorylation tri00220   Arginine biosynthesis tri00230   Purine metabolism tri00240   Pyrimidine metabolism tri00250   Alanine, aspartate and glutamate metabolism tri00260   Glycine, serine and threonine metabolism tri00261   Monobactam biosynthesis tri00270   Cysteine and methionine metabolism tri00280   Valine, leucine and isoleucine degradation tri00290   Valine, leucine and isoleucine biosynthesis tri00300   Lysine biosynthesis tri00330   Arginine and proline metabolism tri00340   Histidine metabolism tri00350   Tyrosine metabolism tri00360   Phenylalanine metabolism tri00362   Benzoate degradation tri00400   Phenylalanine, tyrosine and tryptophan biosynthesis tri00401   Novobiocin biosynthesis tri00410   beta-Alanine metabolism tri00440   Phosphonate and phosphinate metabolism tri00450   Selenocompound metabolism tri00460   Cyanoamino acid metabolism tri00470   D-Amino acid metabolism tri00480   Glutathione metabolism tri00500   Starch and sucrose metabolism tri00511   Other glycan degradation tri00520   Amino sugar and nucleotide sugar metabolism tri00521   Streptomycin biosynthesis tri00523   Polyketide sugar unit biosynthesis tri00525   Acarbose and validamycin biosynthesis tri00541   O-Antigen nucleotide sugar biosynthesis tri00542   O-Antigen repeat unit biosynthesis tri00543   Exopolysaccharide biosynthesis tri00550   Peptidoglycan biosynthesis tri00552   Teichoic acid biosynthesis tri00561   Glycerolipid metabolism tri00564   Glycerophospholipid metabolism tri00600   Sphingolipid metabolism tri00620   Pyruvate metabolism tri00625   Chloroalkane and chloroalkene degradation tri00626   Naphthalene degradation tri00630   Glyoxylate and dicarboxylate metabolism tri00640   Propanoate metabolism tri00650   Butanoate metabolism tri00660   C5-Branched dibasic acid metabolism tri00670   One carbon pool by folate tri00680   Methane metabolism tri00710   Carbon fixation by Calvin cycle tri00720   Other carbon fixation pathways tri00730   Thiamine metabolism tri00740   Riboflavin metabolism tri00750   Vitamin B6 metabolism tri00760   Nicotinate and nicotinamide metabolism tri00770   Pantothenate and CoA biosynthesis tri00780   Biotin metabolism tri00790   Folate biosynthesis tri00791   Atrazine degradation tri00860   Porphyrin metabolism tri00900   Terpenoid backbone biosynthesis tri00903   Limonene degradation tri00910   Nitrogen metabolism tri00920   Sulfur metabolism tri00946   Degradation of flavonoids tri00998   Biosynthesis of various antibiotics tri00999   Biosynthesis of various plant secondary metabolites tri01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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