PATHWAY: tsb01100 Help Entry tsb01100                    Pathway                                 Name Metabolic pathways - Thiothrix subterranea Class BRITE hierarchy Pathway map tsb01100   Metabolic pathways Module tsb_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:tsb01100] tsb_M00002   Glycolysis, core module involving three-carbon compounds [PATH:tsb01100] tsb_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tsb01100] tsb_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:tsb01100] tsb_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:tsb01100] tsb_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:tsb01100] tsb_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tsb01100] tsb_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:tsb01100] tsb_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:tsb01100] tsb_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tsb01100] tsb_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:tsb01100] tsb_M00015   Proline biosynthesis, glutamate => proline [PATH:tsb01100] tsb_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:tsb01100] tsb_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:tsb01100] tsb_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:tsb01100] tsb_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tsb01100] tsb_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:tsb01100] tsb_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:tsb01100] tsb_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:tsb01100] tsb_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tsb01100] tsb_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:tsb01100] tsb_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tsb01100] tsb_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:tsb01100] tsb_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:tsb01100] tsb_M00063   CMP-KDO biosynthesis [PATH:tsb01100] tsb_M00082   Fatty acid biosynthesis, initiation [PATH:tsb01100] tsb_M00083   Fatty acid biosynthesis, elongation [PATH:tsb01100] tsb_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:tsb01100] tsb_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:tsb01100] tsb_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:tsb01100] tsb_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:tsb01100] tsb_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:tsb01100] tsb_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:tsb01100] tsb_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:tsb01100] tsb_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:tsb01100] tsb_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tsb01100] tsb_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:tsb01100] tsb_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:tsb01100] tsb_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:tsb01100] tsb_M00149   Succinate dehydrogenase, prokaryotes [PATH:tsb01100] tsb_M00151   Cytochrome bc1 complex respiratory unit [PATH:tsb01100] tsb_M00155   Cytochrome c oxidase, prokaryotes [PATH:tsb01100] tsb_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:tsb01100] tsb_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:tsb01100] tsb_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tsb01100] tsb_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:tsb01100] tsb_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:tsb01100] tsb_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:tsb01100] tsb_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:tsb01100] tsb_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:tsb01100] tsb_M00572   Pimeloyl-ACP biosynthesis, BioC-BioH pathway, malonyl-ACP => pimeloyl-ACP [PATH:tsb01100] tsb_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:tsb01100] tsb_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:tsb01100] tsb_M00596   Dissimilatory sulfate reduction, sulfate => H2S [PATH:tsb01100] tsb_M00621   Glycine cleavage system [PATH:tsb01100] tsb_M00793   dTDP-L-rhamnose biosynthesis [PATH:tsb01100] tsb_M00844   Arginine biosynthesis, ornithine => arginine [PATH:tsb01100] tsb_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:tsb01100] tsb_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:tsb01100] tsb_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tsb01100] tsb_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:tsb01100] tsb_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:tsb01100] tsb_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:tsb01100] tsb_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:tsb01100] tsb_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:tsb01100] Organism Thiothrix subterranea [GN:tsb] Related pathway tsb00010   Glycolysis / Gluconeogenesis tsb00020   Citrate cycle (TCA cycle) tsb00030   Pentose phosphate pathway tsb00040   Pentose and glucuronate interconversions tsb00051   Fructose and mannose metabolism tsb00052   Galactose metabolism tsb00053   Ascorbate and aldarate metabolism tsb00061   Fatty acid biosynthesis tsb00071   Fatty acid degradation tsb00130   Ubiquinone and other terpenoid-quinone biosynthesis tsb00190   Oxidative phosphorylation tsb00220   Arginine biosynthesis tsb00230   Purine metabolism tsb00240   Pyrimidine metabolism tsb00250   Alanine, aspartate and glutamate metabolism tsb00260   Glycine, serine and threonine metabolism tsb00261   Monobactam biosynthesis tsb00270   Cysteine and methionine metabolism tsb00280   Valine, leucine and isoleucine degradation tsb00290   Valine, leucine and isoleucine biosynthesis tsb00300   Lysine biosynthesis tsb00310   Lysine degradation tsb00330   Arginine and proline metabolism tsb00332   Carbapenem biosynthesis tsb00340   Histidine metabolism tsb00350   Tyrosine metabolism tsb00360   Phenylalanine metabolism tsb00362   Benzoate degradation tsb00380   Tryptophan metabolism tsb00400   Phenylalanine, tyrosine and tryptophan biosynthesis tsb00401   Novobiocin biosynthesis tsb00410   beta-Alanine metabolism tsb00430   Taurine and hypotaurine metabolism tsb00450   Selenocompound metabolism tsb00460   Cyanoamino acid metabolism tsb00470   D-Amino acid metabolism tsb00480   Glutathione metabolism tsb00500   Starch and sucrose metabolism tsb00520   Amino sugar and nucleotide sugar metabolism tsb00521   Streptomycin biosynthesis tsb00523   Polyketide sugar unit biosynthesis tsb00525   Acarbose and validamycin biosynthesis tsb00540   Lipopolysaccharide biosynthesis tsb00541   O-Antigen nucleotide sugar biosynthesis tsb00542   O-Antigen repeat unit biosynthesis tsb00543   Exopolysaccharide biosynthesis tsb00550   Peptidoglycan biosynthesis tsb00552   Teichoic acid biosynthesis tsb00561   Glycerolipid metabolism tsb00562   Inositol phosphate metabolism tsb00564   Glycerophospholipid metabolism tsb00592   alpha-Linolenic acid metabolism tsb00620   Pyruvate metabolism tsb00625   Chloroalkane and chloroalkene degradation tsb00626   Naphthalene degradation tsb00630   Glyoxylate and dicarboxylate metabolism tsb00633   Nitrotoluene degradation tsb00640   Propanoate metabolism tsb00650   Butanoate metabolism tsb00660   C5-Branched dibasic acid metabolism tsb00670   One carbon pool by folate tsb00680   Methane metabolism tsb00710   Carbon fixation by Calvin cycle tsb00720   Other carbon fixation pathways tsb00730   Thiamine metabolism tsb00740   Riboflavin metabolism tsb00750   Vitamin B6 metabolism tsb00760   Nicotinate and nicotinamide metabolism tsb00770   Pantothenate and CoA biosynthesis tsb00780   Biotin metabolism tsb00785   Lipoic acid metabolism tsb00790   Folate biosynthesis tsb00860   Porphyrin metabolism tsb00900   Terpenoid backbone biosynthesis tsb00907   Pinene, camphor and geraniol degradation tsb00910   Nitrogen metabolism tsb00920   Sulfur metabolism tsb00999   Biosynthesis of various plant secondary metabolites tsb01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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