KEGG   PATHWAY: tua03050
Entry
tua03050                    Pathway                                
Name
Proteasome - Triticum urartu (red wild einkorn wheat)
Description
The proteasome is a protein-destroying apparatus involved in many essential cellular functions, such as regulation of cell cycle, cell differentiation, signal transduction pathways, antigen processing for appropriate immune responses, stress signaling, inflammatory responses, and apoptosis. It is capable of degrading a variety of cellular proteins in a rapid and timely fashion and most substrate proteins are modified by ubiquitin before their degradation by the proteasome. The proteasome is a large protein complex consisting of a proteolytic core called the 20S particle and ancillary factors that regulate its activity in various ways. The most common form is the 26S proteasome containing one 20S core particle and two 19S regulatory particles that enable the proteasome to degrade ubiquitinated proteins by an ATP-dependent mechanism. Another form is the immunoproteasome containing two 11S regulatory particles, PA28 alpha and PA28 beta, which are induced by interferon gamma under the conditions of intensified immune response. Other regulatory particles include PA28 gamma and PA200. Although PA28 gamma also belongs to a family of activators of the 20S proteasome, it is localized within the nucleus and forms a homoheptamer. PA28 gamma has been implicated in the regulation of cell cycle progression and apoptosis. PA200 has been identified as a large nuclear protein that stimulates proteasomal hydrolysis of peptides.
Class
Genetic Information Processing; Folding, sorting and degradation
Pathway map
tua03050  Proteasome
tua03050

Other DBs
GO: 0000502
Organism
Triticum urartu (red wild einkorn wheat) [GN:tua]
Gene
125510260  probable 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
125552590  probable 26S proteasome non-ATPase regulatory subunit 3 [KO:K03033]
125509443  26S proteasome non-ATPase regulatory subunit 9 [KO:K06693]
125553194  26S proteasome non-ATPase regulatory subunit 12 homolog A-like isoform X1 [KO:K03035]
125511548  26S proteasome non-ATPase regulatory subunit 11 homolog [KO:K03036]
125538487  26S proteasome non-ATPase regulatory subunit 11 homolog [KO:K03036]
125513700  26S proteasome non-ATPase regulatory subunit 6-like [KO:K03037]
125538767  26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
125538769  26S proteasome non-ATPase regulatory subunit 6 [KO:K03037]
125540052  26S proteasome non-ATPase regulatory subunit 7 homolog A [KO:K03038]
125509919  26S proteasome non-ATPase regulatory subunit 13 homolog B-like isoform X1 [KO:K03039]
125512021  26S proteasome non-ATPase regulatory subunit 13 homolog B-like isoform X1 [KO:K03039]
125539625  26S proteasome non-ATPase regulatory subunit 13 homolog B-like [KO:K03039]
125534668  26S proteasome non-ATPase regulatory subunit 14 homolog [KO:K03030]
125522041  26S proteasome non-ATPase regulatory subunit 14 homolog [KO:K03030]
125543652  26S proteasome non-ATPase regulatory subunit 14 homolog [KO:K03030]
125529612  26S proteasome non-ATPase regulatory subunit 8 homolog A-like [KO:K03031]
125547098  putative 26S proteasome non-ATPase regulatory subunit 8 homolog B [KO:K03031]
125539518  26S proteasome non-ATPase regulatory subunit 8 homolog A-like [KO:K03031]
125522320  26S proteasome non-ATPase regulatory subunit 8 homolog A-like [KO:K03031]
125522451  26S proteasome non-ATPase regulatory subunit 8 homolog A-like [KO:K03031]
125529089  protein DELETION OF SUV3 SUPPRESSOR 1(I) [KO:K10881]
125552301  26S proteasome non-ATPase regulatory subunit 4 homolog isoform X1 [KO:K03029]
125514554  26S proteasome non-ATPase regulatory subunit 2 homolog A-like [KO:K03028]
125521963  26S proteasome non-ATPase regulatory subunit 2 homolog A-like isoform X1 [KO:K03028]
125523592  26S proteasome non-ATPase regulatory subunit 2 homolog A-like isoform X1 [KO:K03028]
125525748  26S proteasome non-ATPase regulatory subunit 1 homolog A-like isoform X1 [KO:K03032]
125526863  26S proteasome non-ATPase regulatory subunit 1 homolog A-like isoform X1 [KO:K03032]
125539549  26S proteasome non-ATPase regulatory subunit 1 homolog A-like isoform X1 [KO:K03032]
125518602  26S proteasome regulatory subunit RPN13 [KO:K06691]
125514978  26S proteasome regulatory subunit 7A-like [KO:K03061]
125520638  26S proteasome regulatory subunit 7A [KO:K03061]
125550828  26S proteasome regulatory subunit 4 homolog [KO:K03062]
125535510  26S proteasome regulatory subunit 4 homolog [KO:K03062]
125551955  26S proteasome regulatory subunit 4 homolog [KO:K03062]
125551961  26S proteasome regulatory subunit 4 homolog [KO:K03062]
125512326  26S proteasome regulatory subunit 8 homolog A-like [KO:K03066]
125520416  26S proteasome regulatory subunit 8 homolog A [KO:K03066]
125528616  26S proteasome regulatory subunit S10B homolog B [KO:K03064]
125520692  26S proteasome regulatory subunit S10B homolog B-like [KO:K03064]
125520739  26S proteasome regulatory subunit S10B homolog B-like [KO:K03064]
125521565  26S proteasome regulatory subunit 10B homolog A-like [KO:K03064]
125545711  26S proteasome regulatory subunit 6A homolog [KO:K03065]
125531048  26S proteasome regulatory subunit 6B homolog [KO:K03063]
125533113  26S proteasome regulatory subunit 6B homolog [KO:K03063]
125534137  26S proteasome regulatory subunit 6B homolog [KO:K03063]
125535483  26S proteasome regulatory subunit 6B homolog [KO:K03063]
125539792  26S proteasome regulatory subunit 6B homolog [KO:K03063]
125539798  26S proteasome regulatory subunit 6B homolog [KO:K03063]
125525670  proteasome activator subunit 4 isoform X1 [KO:K06699]
125536319  proteasome subunit alpha type-6-like [KO:K02730] [EC:3.4.25.1]
125552848  proteasome subunit alpha type-6 [KO:K02730] [EC:3.4.25.1]
125544723  proteasome subunit alpha type-2 [KO:K02726] [EC:3.4.25.1]
125520769  proteasome subunit alpha type-4-1 [KO:K02728] [EC:3.4.25.1]
125520848  proteasome subunit alpha type-4-1 [KO:K02728] [EC:3.4.25.1]
125520859  proteasome subunit alpha type-4-1-like [KO:K02728] [EC:3.4.25.1]
125510170  proteasome subunit alpha type-7-B-like [KO:K02731] [EC:3.4.25.1]
125521632  proteasome subunit alpha type-7-A [KO:K02731] [EC:3.4.25.1]
125521687  proteasome subunit alpha type-7-A [KO:K02731] [EC:3.4.25.1]
125551607  proteasome subunit alpha type-5-like [KO:K02729] [EC:3.4.25.1]
125508255  proteasome subunit alpha type-5 [KO:K02729] [EC:3.4.25.1]
125509945  proteasome subunit alpha type-3 [KO:K02727] [EC:3.4.25.1]
125522245  proteasome subunit alpha type-3-like [KO:K02727] [EC:3.4.25.1]
125530525  proteasome subunit beta type-6 [KO:K02738] [EC:3.4.25.1]
125551644  proteasome subunit beta type-7-B-like [KO:K02739] [EC:3.4.25.1]
125516846  proteasome subunit beta type-3-like [KO:K02735] [EC:3.4.25.1]
125523756  proteasome subunit beta type-3 [KO:K02735] [EC:3.4.25.1]
125507422  proteasome subunit beta type-2-B-like [KO:K02734] [EC:3.4.25.1]
125507429  uncharacterized protein LOC125507429 [KO:K02734] [EC:3.4.25.1]
125507430  proteasome subunit beta type-2-B-like [KO:K02734] [EC:3.4.25.1]
125525864  proteasome subunit beta type-5-A-like [KO:K02737] [EC:3.4.25.1]
125547140  uncharacterized protein LOC125547140 [KO:K02737] [EC:3.4.25.1]
125520579  uncharacterized protein LOC125520579 isoform X1 [KO:K02737] [EC:3.4.25.1]
125524911  proteasome subunit beta type-5-A-like [KO:K02737] [EC:3.4.25.1]
125509890  proteasome subunit beta type-1 [KO:K02732] [EC:3.4.25.1]
125550849  proteasome subunit beta type-4-like [KO:K02736] [EC:3.4.25.1]
125556390  proteasome subunit beta type-4-like [KO:K02736] [EC:3.4.25.1]
125530542  probable proteasome inhibitor [KO:K06700]
125516451  probable proteasome inhibitor [KO:K06700]
125516452  probable proteasome inhibitor [KO:K06700]
125516454  probable proteasome inhibitor [KO:K06700]
125516458  probable proteasome inhibitor [KO:K06700]
125516459  probable proteasome inhibitor [KO:K06700]
125536725  probable proteasome inhibitor [KO:K06700]
125536726  probable proteasome inhibitor [KO:K06700]
125507514  cyclin-B1-2-like [KO:K11599]
125511274  cyclin-B1-2-like [KO:K11599]
125515221  cyclin-B1-2-like [KO:K11599]
125518679  cyclin-B1-2-like [KO:K11599]
125554862  cyclin-B1-2-like [KO:K11599]
Reference
  Authors
Hirano Y, Murata S, Tanaka K
  Title
Large- and small-scale purification of mammalian 26S proteasomes.
  Journal
Methods Enzymol 399:227-40 (2005)
DOI:10.1016/S0076-6879(05)99015-0
Reference
  Authors
Saeki Y, Tanaka K
  Title
Cell biology: two hands for degradation.
  Journal
Nature 453:460-1 (2008)
DOI:10.1038/453460a
Reference
  Authors
Smith DM, Benaroudj N, Goldberg A
  Title
Proteasomes and their associated ATPases: a destructive combination.
  Journal
J Struct Biol 156:72-83 (2006)
DOI:10.1016/j.jsb.2006.04.012
Reference
  Authors
Strehl B, Seifert U, Kruger E, Heink S, Kuckelkorn U, Kloetzel PM
  Title
Interferon-gamma, the functional plasticity of the ubiquitin-proteasome system, and MHC class I antigen processing.
  Journal
Immunol Rev 207:19-30 (2005)
DOI:10.1111/j.0105-2896.2005.00308.x
Reference
  Authors
Darwin KH
  Title
Prokaryotic ubiquitin-like protein (Pup), proteasomes and pathogenesis.
  Journal
Nat Rev Microbiol 7:485-91 (2009)
DOI:10.1038/nrmicro2148
Reference
  Authors
Tomko RJ Jr, Hochstrasser M
  Title
Molecular architecture and assembly of the eukaryotic proteasome.
  Journal
Annu Rev Biochem 82:415-45 (2013)
DOI:10.1146/annurev-biochem-060410-150257
Reference
  Authors
Budenholzer L, Cheng CL, Li Y, Hochstrasser M
  Title
Proteasome Structure and Assembly.
  Journal
J Mol Biol 429:3500-3524 (2017)
DOI:10.1016/j.jmb.2017.05.027
Reference
  Authors
Cloos J, Roeten MS, Franke NE, van Meerloo J, Zweegman S, Kaspers GJ, Jansen G
  Title
(Immuno)proteasomes as therapeutic target in acute leukemia.
  Journal
Cancer Metastasis Rev 36:599-615 (2017)
DOI:10.1007/s10555-017-9699-4
Reference
  Authors
Sakata E, Bohn S, Mihalache O, Kiss P, Beck F, Nagy I, Nickell S, Tanaka K, Saeki Y, Forster F, Baumeister W
  Title
Localization of the proteasomal ubiquitin receptors Rpn10 and Rpn13 by electron cryomicroscopy.
  Journal
Proc Natl Acad Sci U S A 109:1479-84 (2012)
DOI:10.1073/pnas.1119394109
Related
pathway
tua04120  Ubiquitin mediated proteolysis
KO pathway
ko03050   
LinkDB

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