PATHWAY: tum01100 Help Entry tum01100                    Pathway                                 Name Metabolic pathways - Tumebacillus avium Class BRITE hierarchy Pathway map tum01100   Metabolic pathways Module tum_M00002   Glycolysis, core module involving three-carbon compounds [PATH:tum01100] tum_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:tum01100] tum_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:tum01100] tum_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:tum01100] tum_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:tum01100] tum_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:tum01100] tum_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:tum01100] tum_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:tum01100] tum_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:tum01100] tum_M00021   Cysteine biosynthesis, serine => cysteine [PATH:tum01100] tum_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:tum01100] tum_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:tum01100] tum_M00026   Histidine biosynthesis, PRPP => histidine [PATH:tum01100] tum_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:tum01100] tum_M00034   Methionine salvage pathway [PATH:tum01100] tum_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:tum01100] tum_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:tum01100] tum_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:tum01100] tum_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:tum01100] tum_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:tum01100] tum_M00082   Fatty acid biosynthesis, initiation [PATH:tum01100] tum_M00083   Fatty acid biosynthesis, elongation [PATH:tum01100] tum_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:tum01100] tum_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:tum01100] tum_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:tum01100] tum_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:tum01100] tum_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:tum01100] tum_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:tum01100] tum_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:tum01100] tum_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:tum01100] tum_M00133   Polyamine biosynthesis, arginine => agmatine => putrescine => spermidine [PATH:tum01100] tum_M00140   C1-unit interconversion, prokaryotes [PATH:tum01100] tum_M00151   Cytochrome bc1 complex respiratory unit [PATH:tum01100] tum_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:tum01100] tum_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:tum01100] tum_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:tum01100] tum_M00525   Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:tum01100] tum_M00527   Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:tum01100] tum_M00577   Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:tum01100] tum_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:tum01100] tum_M00621   Glycine cleavage system [PATH:tum01100] tum_M00844   Arginine biosynthesis, ornithine => arginine [PATH:tum01100] tum_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:tum01100] tum_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:tum01100] tum_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:tum01100] tum_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:tum01100] tum_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:tum01100] tum_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:tum01100] tum_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:tum01100] tum_M00970   Proline degradation, proline => glutamate [PATH:tum01100] Organism Tumebacillus avium [GN:tum] Related pathway tum00010   Glycolysis / Gluconeogenesis tum00020   Citrate cycle (TCA cycle) tum00030   Pentose phosphate pathway tum00040   Pentose and glucuronate interconversions tum00051   Fructose and mannose metabolism tum00052   Galactose metabolism tum00053   Ascorbate and aldarate metabolism tum00061   Fatty acid biosynthesis tum00071   Fatty acid degradation tum00130   Ubiquinone and other terpenoid-quinone biosynthesis tum00190   Oxidative phosphorylation tum00220   Arginine biosynthesis tum00230   Purine metabolism tum00240   Pyrimidine metabolism tum00250   Alanine, aspartate and glutamate metabolism tum00260   Glycine, serine and threonine metabolism tum00261   Monobactam biosynthesis tum00270   Cysteine and methionine metabolism tum00280   Valine, leucine and isoleucine degradation tum00290   Valine, leucine and isoleucine biosynthesis tum00300   Lysine biosynthesis tum00310   Lysine degradation tum00311   Penicillin and cephalosporin biosynthesis tum00330   Arginine and proline metabolism tum00340   Histidine metabolism tum00350   Tyrosine metabolism tum00360   Phenylalanine metabolism tum00362   Benzoate degradation tum00380   Tryptophan metabolism tum00400   Phenylalanine, tyrosine and tryptophan biosynthesis tum00401   Novobiocin biosynthesis tum00405   Phenazine biosynthesis tum00410   beta-Alanine metabolism tum00430   Taurine and hypotaurine metabolism tum00440   Phosphonate and phosphinate metabolism tum00450   Selenocompound metabolism tum00460   Cyanoamino acid metabolism tum00470   D-Amino acid metabolism tum00480   Glutathione metabolism tum00500   Starch and sucrose metabolism tum00520   Amino sugar and nucleotide sugar metabolism tum00521   Streptomycin biosynthesis tum00540   Lipopolysaccharide biosynthesis tum00541   O-Antigen nucleotide sugar biosynthesis tum00543   Exopolysaccharide biosynthesis tum00550   Peptidoglycan biosynthesis tum00552   Teichoic acid biosynthesis tum00561   Glycerolipid metabolism tum00562   Inositol phosphate metabolism tum00564   Glycerophospholipid metabolism tum00592   alpha-Linolenic acid metabolism tum00620   Pyruvate metabolism tum00625   Chloroalkane and chloroalkene degradation tum00626   Naphthalene degradation tum00627   Aminobenzoate degradation tum00630   Glyoxylate and dicarboxylate metabolism tum00640   Propanoate metabolism tum00643   Styrene degradation tum00650   Butanoate metabolism tum00660   C5-Branched dibasic acid metabolism tum00670   One carbon pool by folate tum00680   Methane metabolism tum00710   Carbon fixation by Calvin cycle tum00720   Other carbon fixation pathways tum00730   Thiamine metabolism tum00740   Riboflavin metabolism tum00750   Vitamin B6 metabolism tum00760   Nicotinate and nicotinamide metabolism tum00770   Pantothenate and CoA biosynthesis tum00780   Biotin metabolism tum00785   Lipoic acid metabolism tum00790   Folate biosynthesis tum00860   Porphyrin metabolism tum00900   Terpenoid backbone biosynthesis tum00907   Pinene, camphor and geraniol degradation tum00910   Nitrogen metabolism tum00920   Sulfur metabolism tum00997   Biosynthesis of various other secondary metabolites tum00998   Biosynthesis of various antibiotics tum00999   Biosynthesis of various plant secondary metabolites tum01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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