PATHWAY: vaf01100 Help Entry vaf01100                    Pathway                                 Name Metabolic pathways - Vibrio alfacsensis Class BRITE hierarchy Pathway map vaf01100   Metabolic pathways Module vaf_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vaf01100] vaf_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vaf01100] vaf_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vaf01100] vaf_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vaf01100] vaf_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vaf01100] vaf_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vaf01100] vaf_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vaf01100] vaf_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vaf01100] vaf_M00012   Glyoxylate cycle [PATH:vaf01100] vaf_M00015   Proline biosynthesis, glutamate => proline [PATH:vaf01100] vaf_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vaf01100] vaf_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vaf01100] vaf_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vaf01100] vaf_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vaf01100] vaf_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vaf01100] vaf_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vaf01100] vaf_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vaf01100] vaf_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vaf01100] vaf_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:vaf01100] vaf_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vaf01100] vaf_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vaf01100] vaf_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vaf01100] vaf_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vaf01100] vaf_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vaf01100] vaf_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vaf01100] vaf_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vaf01100] vaf_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vaf01100] vaf_M00082   Fatty acid biosynthesis, initiation [PATH:vaf01100] vaf_M00083   Fatty acid biosynthesis, elongation [PATH:vaf01100] vaf_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vaf01100] vaf_M00087   beta-Oxidation [PATH:vaf01100] vaf_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vaf01100] vaf_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vaf01100] vaf_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vaf01100] vaf_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vaf01100] vaf_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vaf01100] vaf_M00140   C1-unit interconversion, prokaryotes [PATH:vaf01100] vaf_M00149   Succinate dehydrogenase, prokaryotes [PATH:vaf01100] vaf_M00150   Fumarate reductase, prokaryotes [PATH:vaf01100] vaf_M00151   Cytochrome bc1 complex respiratory unit [PATH:vaf01100] vaf_M00155   Cytochrome c oxidase, prokaryotes [PATH:vaf01100] vaf_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vaf01100] vaf_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vaf01100] vaf_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vaf01100] vaf_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vaf01100] vaf_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vaf01100] vaf_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vaf01100] vaf_M00555   Betaine biosynthesis, choline => betaine [PATH:vaf01100] vaf_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vaf01100] vaf_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vaf01100] vaf_M00621   Glycine cleavage system [PATH:vaf01100] vaf_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vaf01100] vaf_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vaf01100] vaf_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:vaf01100] vaf_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vaf01100] vaf_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vaf01100] vaf_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:vaf01100] vaf_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:vaf01100] vaf_M00970   Proline degradation, proline => glutamate [PATH:vaf01100] Organism Vibrio alfacsensis [GN:vaf] Related pathway vaf00010   Glycolysis / Gluconeogenesis vaf00020   Citrate cycle (TCA cycle) vaf00030   Pentose phosphate pathway vaf00040   Pentose and glucuronate interconversions vaf00051   Fructose and mannose metabolism vaf00052   Galactose metabolism vaf00053   Ascorbate and aldarate metabolism vaf00061   Fatty acid biosynthesis vaf00071   Fatty acid degradation vaf00121   Secondary bile acid biosynthesis vaf00130   Ubiquinone and other terpenoid-quinone biosynthesis vaf00190   Oxidative phosphorylation vaf00220   Arginine biosynthesis vaf00230   Purine metabolism vaf00240   Pyrimidine metabolism vaf00250   Alanine, aspartate and glutamate metabolism vaf00260   Glycine, serine and threonine metabolism vaf00261   Monobactam biosynthesis vaf00270   Cysteine and methionine metabolism vaf00280   Valine, leucine and isoleucine degradation vaf00290   Valine, leucine and isoleucine biosynthesis vaf00300   Lysine biosynthesis vaf00310   Lysine degradation vaf00330   Arginine and proline metabolism vaf00332   Carbapenem biosynthesis vaf00340   Histidine metabolism vaf00350   Tyrosine metabolism vaf00360   Phenylalanine metabolism vaf00361   Chlorocyclohexane and chlorobenzene degradation vaf00362   Benzoate degradation vaf00364   Fluorobenzoate degradation vaf00380   Tryptophan metabolism vaf00400   Phenylalanine, tyrosine and tryptophan biosynthesis vaf00401   Novobiocin biosynthesis vaf00410   beta-Alanine metabolism vaf00430   Taurine and hypotaurine metabolism vaf00450   Selenocompound metabolism vaf00460   Cyanoamino acid metabolism vaf00470   D-Amino acid metabolism vaf00480   Glutathione metabolism vaf00500   Starch and sucrose metabolism vaf00511   Other glycan degradation vaf00520   Amino sugar and nucleotide sugar metabolism vaf00521   Streptomycin biosynthesis vaf00523   Polyketide sugar unit biosynthesis vaf00525   Acarbose and validamycin biosynthesis vaf00540   Lipopolysaccharide biosynthesis vaf00541   O-Antigen nucleotide sugar biosynthesis vaf00543   Exopolysaccharide biosynthesis vaf00550   Peptidoglycan biosynthesis vaf00552   Teichoic acid biosynthesis vaf00561   Glycerolipid metabolism vaf00562   Inositol phosphate metabolism vaf00564   Glycerophospholipid metabolism vaf00592   alpha-Linolenic acid metabolism vaf00600   Sphingolipid metabolism vaf00620   Pyruvate metabolism vaf00621   Dioxin degradation vaf00622   Xylene degradation vaf00623   Toluene degradation vaf00625   Chloroalkane and chloroalkene degradation vaf00626   Naphthalene degradation vaf00627   Aminobenzoate degradation vaf00630   Glyoxylate and dicarboxylate metabolism vaf00633   Nitrotoluene degradation vaf00640   Propanoate metabolism vaf00643   Styrene degradation vaf00650   Butanoate metabolism vaf00660   C5-Branched dibasic acid metabolism vaf00670   One carbon pool by folate vaf00680   Methane metabolism vaf00710   Carbon fixation by Calvin cycle vaf00720   Other carbon fixation pathways vaf00730   Thiamine metabolism vaf00740   Riboflavin metabolism vaf00750   Vitamin B6 metabolism vaf00760   Nicotinate and nicotinamide metabolism vaf00770   Pantothenate and CoA biosynthesis vaf00780   Biotin metabolism vaf00785   Lipoic acid metabolism vaf00790   Folate biosynthesis vaf00860   Porphyrin metabolism vaf00900   Terpenoid backbone biosynthesis vaf00903   Limonene degradation vaf00907   Pinene, camphor and geraniol degradation vaf00910   Nitrogen metabolism vaf00920   Sulfur metabolism vaf00930   Caprolactam degradation vaf00946   Degradation of flavonoids vaf00984   Steroid degradation vaf00999   Biosynthesis of various plant secondary metabolites vaf01040   Biosynthesis of unsaturated fatty acids vaf01059   Biosynthesis of enediyne antibiotics KO pathway ko01100     LinkDB All DBs

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