PATHWAY: vaq01100 Help Entry vaq01100                    Pathway                                 Name Metabolic pathways - Vibrio aquimaris Class BRITE hierarchy Pathway map vaq01100   Metabolic pathways Module vaq_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vaq01100] vaq_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vaq01100] vaq_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vaq01100] vaq_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vaq01100] vaq_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vaq01100] vaq_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vaq01100] vaq_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vaq01100] vaq_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vaq01100] vaq_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vaq01100] vaq_M00012   Glyoxylate cycle [PATH:vaq01100] vaq_M00015   Proline biosynthesis, glutamate => proline [PATH:vaq01100] vaq_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vaq01100] vaq_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vaq01100] vaq_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vaq01100] vaq_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vaq01100] vaq_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vaq01100] vaq_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vaq01100] vaq_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vaq01100] vaq_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vaq01100] vaq_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vaq01100] vaq_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vaq01100] vaq_M00026   Histidine biosynthesis, PRPP => histidine [PATH:vaq01100] vaq_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vaq01100] vaq_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:vaq01100] vaq_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vaq01100] vaq_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vaq01100] vaq_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vaq01100] vaq_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vaq01100] vaq_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vaq01100] vaq_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vaq01100] vaq_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vaq01100] vaq_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vaq01100] vaq_M00063   CMP-KDO biosynthesis [PATH:vaq01100] vaq_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vaq01100] vaq_M00082   Fatty acid biosynthesis, initiation [PATH:vaq01100] vaq_M00083   Fatty acid biosynthesis, elongation [PATH:vaq01100] vaq_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vaq01100] vaq_M00087   beta-Oxidation [PATH:vaq01100] vaq_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vaq01100] vaq_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vaq01100] vaq_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vaq01100] vaq_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vaq01100] vaq_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vaq01100] vaq_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vaq01100] vaq_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vaq01100] vaq_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vaq01100] vaq_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vaq01100] vaq_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vaq01100] vaq_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:vaq01100] vaq_M00149   Succinate dehydrogenase, prokaryotes [PATH:vaq01100] vaq_M00150   Fumarate reductase, prokaryotes [PATH:vaq01100] vaq_M00151   Cytochrome bc1 complex respiratory unit [PATH:vaq01100] vaq_M00155   Cytochrome c oxidase, prokaryotes [PATH:vaq01100] vaq_M00156   Cytochrome c oxidase, cbb3-type [PATH:vaq01100] vaq_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vaq01100] vaq_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vaq01100] vaq_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vaq01100] vaq_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vaq01100] vaq_M00417   Cytochrome o ubiquinol oxidase [PATH:vaq01100] vaq_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vaq01100] vaq_M00555   Betaine biosynthesis, choline => betaine [PATH:vaq01100] vaq_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vaq01100] vaq_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vaq01100] vaq_M00621   Glycine cleavage system [PATH:vaq01100] vaq_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vaq01100] vaq_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vaq01100] vaq_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:vaq01100] vaq_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vaq01100] vaq_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vaq01100] vaq_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:vaq01100] vaq_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:vaq01100] vaq_M00970   Proline degradation, proline => glutamate [PATH:vaq01100] Organism Vibrio aquimaris [GN:vaq] Related pathway vaq00010   Glycolysis / Gluconeogenesis vaq00020   Citrate cycle (TCA cycle) vaq00030   Pentose phosphate pathway vaq00040   Pentose and glucuronate interconversions vaq00051   Fructose and mannose metabolism vaq00052   Galactose metabolism vaq00061   Fatty acid biosynthesis vaq00071   Fatty acid degradation vaq00130   Ubiquinone and other terpenoid-quinone biosynthesis vaq00190   Oxidative phosphorylation vaq00220   Arginine biosynthesis vaq00230   Purine metabolism vaq00240   Pyrimidine metabolism vaq00250   Alanine, aspartate and glutamate metabolism vaq00260   Glycine, serine and threonine metabolism vaq00261   Monobactam biosynthesis vaq00270   Cysteine and methionine metabolism vaq00280   Valine, leucine and isoleucine degradation vaq00290   Valine, leucine and isoleucine biosynthesis vaq00300   Lysine biosynthesis vaq00310   Lysine degradation vaq00330   Arginine and proline metabolism vaq00332   Carbapenem biosynthesis vaq00340   Histidine metabolism vaq00350   Tyrosine metabolism vaq00360   Phenylalanine metabolism vaq00362   Benzoate degradation vaq00380   Tryptophan metabolism vaq00400   Phenylalanine, tyrosine and tryptophan biosynthesis vaq00401   Novobiocin biosynthesis vaq00410   beta-Alanine metabolism vaq00430   Taurine and hypotaurine metabolism vaq00450   Selenocompound metabolism vaq00460   Cyanoamino acid metabolism vaq00470   D-Amino acid metabolism vaq00480   Glutathione metabolism vaq00500   Starch and sucrose metabolism vaq00511   Other glycan degradation vaq00520   Amino sugar and nucleotide sugar metabolism vaq00521   Streptomycin biosynthesis vaq00540   Lipopolysaccharide biosynthesis vaq00541   O-Antigen nucleotide sugar biosynthesis vaq00543   Exopolysaccharide biosynthesis vaq00550   Peptidoglycan biosynthesis vaq00552   Teichoic acid biosynthesis vaq00561   Glycerolipid metabolism vaq00562   Inositol phosphate metabolism vaq00564   Glycerophospholipid metabolism vaq00592   alpha-Linolenic acid metabolism vaq00600   Sphingolipid metabolism vaq00620   Pyruvate metabolism vaq00623   Toluene degradation vaq00625   Chloroalkane and chloroalkene degradation vaq00626   Naphthalene degradation vaq00627   Aminobenzoate degradation vaq00630   Glyoxylate and dicarboxylate metabolism vaq00633   Nitrotoluene degradation vaq00640   Propanoate metabolism vaq00643   Styrene degradation vaq00650   Butanoate metabolism vaq00660   C5-Branched dibasic acid metabolism vaq00670   One carbon pool by folate vaq00680   Methane metabolism vaq00710   Carbon fixation by Calvin cycle vaq00720   Other carbon fixation pathways vaq00730   Thiamine metabolism vaq00740   Riboflavin metabolism vaq00750   Vitamin B6 metabolism vaq00760   Nicotinate and nicotinamide metabolism vaq00770   Pantothenate and CoA biosynthesis vaq00780   Biotin metabolism vaq00785   Lipoic acid metabolism vaq00790   Folate biosynthesis vaq00860   Porphyrin metabolism vaq00900   Terpenoid backbone biosynthesis vaq00907   Pinene, camphor and geraniol degradation vaq00910   Nitrogen metabolism vaq00920   Sulfur metabolism vaq00930   Caprolactam degradation vaq00998   Biosynthesis of various antibiotics vaq00999   Biosynthesis of various plant secondary metabolites vaq01040   Biosynthesis of unsaturated fatty acids vaq01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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