KEGG   PATHWAY: vfm01100
Entry
vfm01100                    Pathway                                
Name
Metabolic pathways - Aliivibrio fischeri MJ11
Class
Pathway map
vfm01100  Metabolic pathways
vfm01100

Module
vfm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vfm01100]
vfm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vfm01100]
vfm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vfm01100]
vfm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vfm01100]
vfm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vfm01100]
vfm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vfm01100]
vfm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vfm01100]
vfm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vfm01100]
vfm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vfm01100]
vfm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vfm01100]
vfm_M00012  Glyoxylate cycle [PATH:vfm01100]
vfm_M00015  Proline biosynthesis, glutamate => proline [PATH:vfm01100]
vfm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vfm01100]
vfm_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vfm01100]
vfm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vfm01100]
vfm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vfm01100]
vfm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vfm01100]
vfm_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vfm01100]
vfm_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vfm01100]
vfm_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vfm01100]
vfm_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vfm01100]
vfm_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vfm01100]
vfm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vfm01100]
vfm_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vfm01100]
vfm_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vfm01100]
vfm_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vfm01100]
vfm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vfm01100]
vfm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vfm01100]
vfm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vfm01100]
vfm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vfm01100]
vfm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vfm01100]
vfm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vfm01100]
vfm_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vfm01100]
vfm_M00063  CMP-KDO biosynthesis [PATH:vfm01100]
vfm_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vfm01100]
vfm_M00082  Fatty acid biosynthesis, initiation [PATH:vfm01100]
vfm_M00083  Fatty acid biosynthesis, elongation [PATH:vfm01100]
vfm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vfm01100]
vfm_M00087  beta-Oxidation [PATH:vfm01100]
vfm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vfm01100]
vfm_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vfm01100]
vfm_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vfm01100]
vfm_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vfm01100]
vfm_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vfm01100]
vfm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vfm01100]
vfm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vfm01100]
vfm_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vfm01100]
vfm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vfm01100]
vfm_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vfm01100]
vfm_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vfm01100]
vfm_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vfm01100]
vfm_M00140  C1-unit interconversion, prokaryotes [PATH:vfm01100]
vfm_M00149  Succinate dehydrogenase, prokaryotes [PATH:vfm01100]
vfm_M00150  Fumarate reductase, prokaryotes [PATH:vfm01100]
vfm_M00151  Cytochrome bc1 complex respiratory unit [PATH:vfm01100]
vfm_M00156  Cytochrome c oxidase, cbb3-type [PATH:vfm01100]
vfm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vfm01100]
vfm_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vfm01100]
vfm_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vfm01100]
vfm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vfm01100]
vfm_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vfm01100]
vfm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vfm01100]
vfm_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vfm01100]
vfm_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:vfm01100]
vfm_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vfm01100]
vfm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vfm01100]
vfm_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vfm01100]
vfm_M00621  Glycine cleavage system [PATH:vfm01100]
vfm_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vfm01100]
vfm_M00793  dTDP-L-rhamnose biosynthesis [PATH:vfm01100]
vfm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vfm01100]
vfm_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vfm01100]
vfm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vfm01100]
vfm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vfm01100]
vfm_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vfm01100]
vfm_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:vfm01100]
vfm_M00970  Proline degradation, proline => glutamate [PATH:vfm01100]
Organism
Aliivibrio fischeri MJ11 [GN:vfm]
Related
pathway
vfm00010  Glycolysis / Gluconeogenesis
vfm00020  Citrate cycle (TCA cycle)
vfm00030  Pentose phosphate pathway
vfm00040  Pentose and glucuronate interconversions
vfm00051  Fructose and mannose metabolism
vfm00052  Galactose metabolism
vfm00053  Ascorbate and aldarate metabolism
vfm00061  Fatty acid biosynthesis
vfm00071  Fatty acid degradation
vfm00121  Secondary bile acid biosynthesis
vfm00130  Ubiquinone and other terpenoid-quinone biosynthesis
vfm00190  Oxidative phosphorylation
vfm00220  Arginine biosynthesis
vfm00230  Purine metabolism
vfm00240  Pyrimidine metabolism
vfm00250  Alanine, aspartate and glutamate metabolism
vfm00260  Glycine, serine and threonine metabolism
vfm00261  Monobactam biosynthesis
vfm00270  Cysteine and methionine metabolism
vfm00280  Valine, leucine and isoleucine degradation
vfm00290  Valine, leucine and isoleucine biosynthesis
vfm00300  Lysine biosynthesis
vfm00310  Lysine degradation
vfm00330  Arginine and proline metabolism
vfm00332  Carbapenem biosynthesis
vfm00340  Histidine metabolism
vfm00350  Tyrosine metabolism
vfm00360  Phenylalanine metabolism
vfm00362  Benzoate degradation
vfm00380  Tryptophan metabolism
vfm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vfm00401  Novobiocin biosynthesis
vfm00410  beta-Alanine metabolism
vfm00430  Taurine and hypotaurine metabolism
vfm00450  Selenocompound metabolism
vfm00460  Cyanoamino acid metabolism
vfm00470  D-Amino acid metabolism
vfm00480  Glutathione metabolism
vfm00500  Starch and sucrose metabolism
vfm00511  Other glycan degradation
vfm00520  Amino sugar and nucleotide sugar metabolism
vfm00521  Streptomycin biosynthesis
vfm00523  Polyketide sugar unit biosynthesis
vfm00525  Acarbose and validamycin biosynthesis
vfm00540  Lipopolysaccharide biosynthesis
vfm00541  O-Antigen nucleotide sugar biosynthesis
vfm00542  O-Antigen repeat unit biosynthesis
vfm00543  Exopolysaccharide biosynthesis
vfm00550  Peptidoglycan biosynthesis
vfm00552  Teichoic acid biosynthesis
vfm00561  Glycerolipid metabolism
vfm00562  Inositol phosphate metabolism
vfm00564  Glycerophospholipid metabolism
vfm00565  Ether lipid metabolism
vfm00592  alpha-Linolenic acid metabolism
vfm00600  Sphingolipid metabolism
vfm00620  Pyruvate metabolism
vfm00625  Chloroalkane and chloroalkene degradation
vfm00626  Naphthalene degradation
vfm00627  Aminobenzoate degradation
vfm00630  Glyoxylate and dicarboxylate metabolism
vfm00633  Nitrotoluene degradation
vfm00640  Propanoate metabolism
vfm00643  Styrene degradation
vfm00650  Butanoate metabolism
vfm00660  C5-Branched dibasic acid metabolism
vfm00670  One carbon pool by folate
vfm00680  Methane metabolism
vfm00710  Carbon fixation by Calvin cycle
vfm00720  Other carbon fixation pathways
vfm00730  Thiamine metabolism
vfm00740  Riboflavin metabolism
vfm00750  Vitamin B6 metabolism
vfm00760  Nicotinate and nicotinamide metabolism
vfm00770  Pantothenate and CoA biosynthesis
vfm00780  Biotin metabolism
vfm00785  Lipoic acid metabolism
vfm00790  Folate biosynthesis
vfm00860  Porphyrin metabolism
vfm00900  Terpenoid backbone biosynthesis
vfm00907  Pinene, camphor and geraniol degradation
vfm00910  Nitrogen metabolism
vfm00920  Sulfur metabolism
vfm00930  Caprolactam degradation
vfm00997  Biosynthesis of various other secondary metabolites
vfm00999  Biosynthesis of various plant secondary metabolites
vfm01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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