PATHWAY: vjp01100 Help Entry vjp01100                    Pathway                                 Name Metabolic pathways - Vibrio japonicus Class BRITE hierarchy Pathway map vjp01100   Metabolic pathways Module vjp_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vjp01100] vjp_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vjp01100] vjp_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vjp01100] vjp_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vjp01100] vjp_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vjp01100] vjp_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vjp01100] vjp_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vjp01100] vjp_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vjp01100] vjp_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vjp01100] vjp_M00012   Glyoxylate cycle [PATH:vjp01100] vjp_M00015   Proline biosynthesis, glutamate => proline [PATH:vjp01100] vjp_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vjp01100] vjp_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vjp01100] vjp_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vjp01100] vjp_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vjp01100] vjp_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vjp01100] vjp_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vjp01100] vjp_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vjp01100] vjp_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vjp01100] vjp_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vjp01100] vjp_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vjp01100] vjp_M00026   Histidine biosynthesis, PRPP => histidine [PATH:vjp01100] vjp_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vjp01100] vjp_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:vjp01100] vjp_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:vjp01100] vjp_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:vjp01100] vjp_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vjp01100] vjp_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vjp01100] vjp_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vjp01100] vjp_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vjp01100] vjp_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vjp01100] vjp_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vjp01100] vjp_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vjp01100] vjp_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vjp01100] vjp_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vjp01100] vjp_M00063   CMP-KDO biosynthesis [PATH:vjp01100] vjp_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vjp01100] vjp_M00082   Fatty acid biosynthesis, initiation [PATH:vjp01100] vjp_M00083   Fatty acid biosynthesis, elongation [PATH:vjp01100] vjp_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vjp01100] vjp_M00087   beta-Oxidation [PATH:vjp01100] vjp_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vjp01100] vjp_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vjp01100] vjp_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vjp01100] vjp_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vjp01100] vjp_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vjp01100] vjp_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vjp01100] vjp_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vjp01100] vjp_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vjp01100] vjp_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vjp01100] vjp_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vjp01100] vjp_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vjp01100] vjp_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:vjp01100] vjp_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vjp01100] vjp_M00140   C1-unit interconversion, prokaryotes [PATH:vjp01100] vjp_M00149   Succinate dehydrogenase, prokaryotes [PATH:vjp01100] vjp_M00150   Fumarate reductase, prokaryotes [PATH:vjp01100] vjp_M00151   Cytochrome bc1 complex respiratory unit [PATH:vjp01100] vjp_M00155   Cytochrome c oxidase, prokaryotes [PATH:vjp01100] vjp_M00156   Cytochrome c oxidase, cbb3-type [PATH:vjp01100] vjp_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vjp01100] vjp_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vjp01100] vjp_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vjp01100] vjp_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vjp01100] vjp_M00417   Cytochrome o ubiquinol oxidase [PATH:vjp01100] vjp_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vjp01100] vjp_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vjp01100] vjp_M00551   Benzoate degradation, benzoate => catechol / methylbenzoate => methylcatechol [PATH:vjp01100] vjp_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vjp01100] vjp_M00555   Betaine biosynthesis, choline => betaine [PATH:vjp01100] vjp_M00568   Catechol ortho-cleavage, catechol => 3-oxoadipate [PATH:vjp01100] vjp_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vjp01100] vjp_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vjp01100] vjp_M00621   Glycine cleavage system [PATH:vjp01100] vjp_M00793   dTDP-L-rhamnose biosynthesis [PATH:vjp01100] vjp_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vjp01100] vjp_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vjp01100] vjp_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vjp01100] vjp_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vjp01100] vjp_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:vjp01100] vjp_M00970   Proline degradation, proline => glutamate [PATH:vjp01100] Organism Vibrio japonicus [GN:vjp] Related pathway vjp00010   Glycolysis / Gluconeogenesis vjp00020   Citrate cycle (TCA cycle) vjp00030   Pentose phosphate pathway vjp00040   Pentose and glucuronate interconversions vjp00051   Fructose and mannose metabolism vjp00052   Galactose metabolism vjp00053   Ascorbate and aldarate metabolism vjp00061   Fatty acid biosynthesis vjp00071   Fatty acid degradation vjp00130   Ubiquinone and other terpenoid-quinone biosynthesis vjp00190   Oxidative phosphorylation vjp00220   Arginine biosynthesis vjp00230   Purine metabolism vjp00240   Pyrimidine metabolism vjp00250   Alanine, aspartate and glutamate metabolism vjp00260   Glycine, serine and threonine metabolism vjp00261   Monobactam biosynthesis vjp00270   Cysteine and methionine metabolism vjp00280   Valine, leucine and isoleucine degradation vjp00290   Valine, leucine and isoleucine biosynthesis vjp00300   Lysine biosynthesis vjp00310   Lysine degradation vjp00330   Arginine and proline metabolism vjp00332   Carbapenem biosynthesis vjp00340   Histidine metabolism vjp00350   Tyrosine metabolism vjp00360   Phenylalanine metabolism vjp00361   Chlorocyclohexane and chlorobenzene degradation vjp00362   Benzoate degradation vjp00364   Fluorobenzoate degradation vjp00380   Tryptophan metabolism vjp00400   Phenylalanine, tyrosine and tryptophan biosynthesis vjp00401   Novobiocin biosynthesis vjp00410   beta-Alanine metabolism vjp00430   Taurine and hypotaurine metabolism vjp00440   Phosphonate and phosphinate metabolism vjp00450   Selenocompound metabolism vjp00460   Cyanoamino acid metabolism vjp00470   D-Amino acid metabolism vjp00480   Glutathione metabolism vjp00500   Starch and sucrose metabolism vjp00511   Other glycan degradation vjp00520   Amino sugar and nucleotide sugar metabolism vjp00521   Streptomycin biosynthesis vjp00523   Polyketide sugar unit biosynthesis vjp00525   Acarbose and validamycin biosynthesis vjp00540   Lipopolysaccharide biosynthesis vjp00541   O-Antigen nucleotide sugar biosynthesis vjp00542   O-Antigen repeat unit biosynthesis vjp00543   Exopolysaccharide biosynthesis vjp00550   Peptidoglycan biosynthesis vjp00552   Teichoic acid biosynthesis vjp00561   Glycerolipid metabolism vjp00562   Inositol phosphate metabolism vjp00564   Glycerophospholipid metabolism vjp00592   alpha-Linolenic acid metabolism vjp00600   Sphingolipid metabolism vjp00620   Pyruvate metabolism vjp00622   Xylene degradation vjp00623   Toluene degradation vjp00625   Chloroalkane and chloroalkene degradation vjp00626   Naphthalene degradation vjp00627   Aminobenzoate degradation vjp00630   Glyoxylate and dicarboxylate metabolism vjp00640   Propanoate metabolism vjp00643   Styrene degradation vjp00650   Butanoate metabolism vjp00660   C5-Branched dibasic acid metabolism vjp00670   One carbon pool by folate vjp00680   Methane metabolism vjp00730   Thiamine metabolism vjp00740   Riboflavin metabolism vjp00750   Vitamin B6 metabolism vjp00760   Nicotinate and nicotinamide metabolism vjp00770   Pantothenate and CoA biosynthesis vjp00780   Biotin metabolism vjp00785   Lipoic acid metabolism vjp00790   Folate biosynthesis vjp00860   Porphyrin metabolism vjp00900   Terpenoid backbone biosynthesis vjp00907   Pinene, camphor and geraniol degradation vjp00910   Nitrogen metabolism vjp00920   Sulfur metabolism vjp00930   Caprolactam degradation vjp00999   Biosynthesis of various plant secondary metabolites vjp01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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