PATHWAY: vnl01100 Help Entry vnl01100                    Pathway                                 Name Metabolic pathways - Vibrio neocaledonicus Class BRITE hierarchy Pathway map vnl01100   Metabolic pathways Module vnl_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vnl01100] vnl_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vnl01100] vnl_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vnl01100] vnl_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vnl01100] vnl_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vnl01100] vnl_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vnl01100] vnl_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vnl01100] vnl_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vnl01100] vnl_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vnl01100] vnl_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vnl01100] vnl_M00012   Glyoxylate cycle [PATH:vnl01100] vnl_M00015   Proline biosynthesis, glutamate => proline [PATH:vnl01100] vnl_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vnl01100] vnl_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vnl01100] vnl_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vnl01100] vnl_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vnl01100] vnl_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vnl01100] vnl_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vnl01100] vnl_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vnl01100] vnl_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vnl01100] vnl_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vnl01100] vnl_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vnl01100] vnl_M00026   Histidine biosynthesis, PRPP => histidine [PATH:vnl01100] vnl_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vnl01100] vnl_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:vnl01100] vnl_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:vnl01100] vnl_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:vnl01100] vnl_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vnl01100] vnl_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vnl01100] vnl_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vnl01100] vnl_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vnl01100] vnl_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vnl01100] vnl_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vnl01100] vnl_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vnl01100] vnl_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vnl01100] vnl_M00082   Fatty acid biosynthesis, initiation [PATH:vnl01100] vnl_M00083   Fatty acid biosynthesis, elongation [PATH:vnl01100] vnl_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vnl01100] vnl_M00087   beta-Oxidation [PATH:vnl01100] vnl_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vnl01100] vnl_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vnl01100] vnl_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vnl01100] vnl_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vnl01100] vnl_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vnl01100] vnl_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vnl01100] vnl_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vnl01100] vnl_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vnl01100] vnl_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vnl01100] vnl_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vnl01100] vnl_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vnl01100] vnl_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:vnl01100] vnl_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vnl01100] vnl_M00140   C1-unit interconversion, prokaryotes [PATH:vnl01100] vnl_M00149   Succinate dehydrogenase, prokaryotes [PATH:vnl01100] vnl_M00150   Fumarate reductase, prokaryotes [PATH:vnl01100] vnl_M00151   Cytochrome bc1 complex respiratory unit [PATH:vnl01100] vnl_M00155   Cytochrome c oxidase, prokaryotes [PATH:vnl01100] vnl_M00156   Cytochrome c oxidase, cbb3-type [PATH:vnl01100] vnl_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vnl01100] vnl_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vnl01100] vnl_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vnl01100] vnl_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vnl01100] vnl_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:vnl01100] vnl_M00417   Cytochrome o ubiquinol oxidase [PATH:vnl01100] vnl_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vnl01100] vnl_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vnl01100] vnl_M00555   Betaine biosynthesis, choline => betaine [PATH:vnl01100] vnl_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vnl01100] vnl_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vnl01100] vnl_M00621   Glycine cleavage system [PATH:vnl01100] vnl_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vnl01100] vnl_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vnl01100] vnl_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:vnl01100] vnl_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vnl01100] vnl_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vnl01100] vnl_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:vnl01100] vnl_M00919   Ectoine degradation, ectoine => aspartate [PATH:vnl01100] vnl_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:vnl01100] vnl_M00970   Proline degradation, proline => glutamate [PATH:vnl01100] Organism Vibrio neocaledonicus [GN:vnl] Related pathway vnl00010   Glycolysis / Gluconeogenesis vnl00020   Citrate cycle (TCA cycle) vnl00030   Pentose phosphate pathway vnl00040   Pentose and glucuronate interconversions vnl00051   Fructose and mannose metabolism vnl00052   Galactose metabolism vnl00053   Ascorbate and aldarate metabolism vnl00061   Fatty acid biosynthesis vnl00071   Fatty acid degradation vnl00130   Ubiquinone and other terpenoid-quinone biosynthesis vnl00190   Oxidative phosphorylation vnl00220   Arginine biosynthesis vnl00230   Purine metabolism vnl00240   Pyrimidine metabolism vnl00250   Alanine, aspartate and glutamate metabolism vnl00260   Glycine, serine and threonine metabolism vnl00261   Monobactam biosynthesis vnl00270   Cysteine and methionine metabolism vnl00280   Valine, leucine and isoleucine degradation vnl00290   Valine, leucine and isoleucine biosynthesis vnl00300   Lysine biosynthesis vnl00310   Lysine degradation vnl00330   Arginine and proline metabolism vnl00332   Carbapenem biosynthesis vnl00340   Histidine metabolism vnl00350   Tyrosine metabolism vnl00360   Phenylalanine metabolism vnl00361   Chlorocyclohexane and chlorobenzene degradation vnl00362   Benzoate degradation vnl00364   Fluorobenzoate degradation vnl00380   Tryptophan metabolism vnl00400   Phenylalanine, tyrosine and tryptophan biosynthesis vnl00401   Novobiocin biosynthesis vnl00410   beta-Alanine metabolism vnl00430   Taurine and hypotaurine metabolism vnl00440   Phosphonate and phosphinate metabolism vnl00450   Selenocompound metabolism vnl00460   Cyanoamino acid metabolism vnl00470   D-Amino acid metabolism vnl00480   Glutathione metabolism vnl00500   Starch and sucrose metabolism vnl00511   Other glycan degradation vnl00520   Amino sugar and nucleotide sugar metabolism vnl00521   Streptomycin biosynthesis vnl00523   Polyketide sugar unit biosynthesis vnl00525   Acarbose and validamycin biosynthesis vnl00540   Lipopolysaccharide biosynthesis vnl00541   O-Antigen nucleotide sugar biosynthesis vnl00543   Exopolysaccharide biosynthesis vnl00550   Peptidoglycan biosynthesis vnl00552   Teichoic acid biosynthesis vnl00561   Glycerolipid metabolism vnl00562   Inositol phosphate metabolism vnl00564   Glycerophospholipid metabolism vnl00565   Ether lipid metabolism vnl00592   alpha-Linolenic acid metabolism vnl00600   Sphingolipid metabolism vnl00620   Pyruvate metabolism vnl00623   Toluene degradation vnl00625   Chloroalkane and chloroalkene degradation vnl00626   Naphthalene degradation vnl00627   Aminobenzoate degradation vnl00630   Glyoxylate and dicarboxylate metabolism vnl00633   Nitrotoluene degradation vnl00640   Propanoate metabolism vnl00643   Styrene degradation vnl00650   Butanoate metabolism vnl00660   C5-Branched dibasic acid metabolism vnl00670   One carbon pool by folate vnl00680   Methane metabolism vnl00710   Carbon fixation by Calvin cycle vnl00720   Other carbon fixation pathways vnl00730   Thiamine metabolism vnl00740   Riboflavin metabolism vnl00750   Vitamin B6 metabolism vnl00760   Nicotinate and nicotinamide metabolism vnl00770   Pantothenate and CoA biosynthesis vnl00780   Biotin metabolism vnl00785   Lipoic acid metabolism vnl00790   Folate biosynthesis vnl00860   Porphyrin metabolism vnl00900   Terpenoid backbone biosynthesis vnl00907   Pinene, camphor and geraniol degradation vnl00910   Nitrogen metabolism vnl00920   Sulfur metabolism vnl00930   Caprolactam degradation vnl00999   Biosynthesis of various plant secondary metabolites vnl01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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