KEGG   PATHWAY: vpa01100
Entry
vpa01100                    Pathway                                
Name
Metabolic pathways - Vibrio parahaemolyticus RIMD 2210633
Class
Pathway map
vpa01100  Metabolic pathways
vpa01100

Module
vpa_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vpa01100]
vpa_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vpa01100]
vpa_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vpa01100]
vpa_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vpa01100]
vpa_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vpa01100]
vpa_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vpa01100]
vpa_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vpa01100]
vpa_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vpa01100]
vpa_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vpa01100]
vpa_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vpa01100]
vpa_M00012  Glyoxylate cycle [PATH:vpa01100]
vpa_M00015  Proline biosynthesis, glutamate => proline [PATH:vpa01100]
vpa_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vpa01100]
vpa_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vpa01100]
vpa_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vpa01100]
vpa_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vpa01100]
vpa_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vpa01100]
vpa_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vpa01100]
vpa_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vpa01100]
vpa_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vpa01100]
vpa_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vpa01100]
vpa_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vpa01100]
vpa_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vpa01100]
vpa_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vpa01100]
vpa_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vpa01100]
vpa_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:vpa01100]
vpa_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:vpa01100]
vpa_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vpa01100]
vpa_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vpa01100]
vpa_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vpa01100]
vpa_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vpa01100]
vpa_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vpa01100]
vpa_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vpa01100]
vpa_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vpa01100]
vpa_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vpa01100]
vpa_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vpa01100]
vpa_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vpa01100]
vpa_M00082  Fatty acid biosynthesis, initiation [PATH:vpa01100]
vpa_M00083  Fatty acid biosynthesis, elongation [PATH:vpa01100]
vpa_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vpa01100]
vpa_M00087  beta-Oxidation [PATH:vpa01100]
vpa_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vpa01100]
vpa_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vpa01100]
vpa_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vpa01100]
vpa_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vpa01100]
vpa_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vpa01100]
vpa_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vpa01100]
vpa_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vpa01100]
vpa_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vpa01100]
vpa_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vpa01100]
vpa_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vpa01100]
vpa_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vpa01100]
vpa_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vpa01100]
vpa_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vpa01100]
vpa_M00140  C1-unit interconversion, prokaryotes [PATH:vpa01100]
vpa_M00149  Succinate dehydrogenase, prokaryotes [PATH:vpa01100]
vpa_M00150  Fumarate reductase, prokaryotes [PATH:vpa01100]
vpa_M00151  Cytochrome bc1 complex respiratory unit [PATH:vpa01100]
vpa_M00155  Cytochrome c oxidase, prokaryotes [PATH:vpa01100]
vpa_M00156  Cytochrome c oxidase, cbb3-type [PATH:vpa01100]
vpa_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vpa01100]
vpa_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vpa01100]
vpa_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vpa01100]
vpa_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vpa01100]
vpa_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vpa01100]
vpa_M00417  Cytochrome o ubiquinol oxidase [PATH:vpa01100]
vpa_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vpa01100]
vpa_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vpa01100]
vpa_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vpa01100]
vpa_M00555  Betaine biosynthesis, choline => betaine [PATH:vpa01100]
vpa_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vpa01100]
vpa_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vpa01100]
vpa_M00621  Glycine cleavage system [PATH:vpa01100]
vpa_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vpa01100]
vpa_M00793  dTDP-L-rhamnose biosynthesis [PATH:vpa01100]
vpa_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vpa01100]
vpa_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vpa01100]
vpa_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:vpa01100]
vpa_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vpa01100]
vpa_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vpa01100]
vpa_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vpa01100]
vpa_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:vpa01100]
vpa_M00970  Proline degradation, proline => glutamate [PATH:vpa01100]
Organism
Vibrio parahaemolyticus RIMD 2210633 [GN:vpa]
Related
pathway
vpa00010  Glycolysis / Gluconeogenesis
vpa00020  Citrate cycle (TCA cycle)
vpa00030  Pentose phosphate pathway
vpa00040  Pentose and glucuronate interconversions
vpa00051  Fructose and mannose metabolism
vpa00052  Galactose metabolism
vpa00053  Ascorbate and aldarate metabolism
vpa00061  Fatty acid biosynthesis
vpa00071  Fatty acid degradation
vpa00130  Ubiquinone and other terpenoid-quinone biosynthesis
vpa00190  Oxidative phosphorylation
vpa00220  Arginine biosynthesis
vpa00230  Purine metabolism
vpa00240  Pyrimidine metabolism
vpa00250  Alanine, aspartate and glutamate metabolism
vpa00260  Glycine, serine and threonine metabolism
vpa00261  Monobactam biosynthesis
vpa00270  Cysteine and methionine metabolism
vpa00280  Valine, leucine and isoleucine degradation
vpa00290  Valine, leucine and isoleucine biosynthesis
vpa00300  Lysine biosynthesis
vpa00310  Lysine degradation
vpa00330  Arginine and proline metabolism
vpa00332  Carbapenem biosynthesis
vpa00340  Histidine metabolism
vpa00350  Tyrosine metabolism
vpa00360  Phenylalanine metabolism
vpa00361  Chlorocyclohexane and chlorobenzene degradation
vpa00362  Benzoate degradation
vpa00364  Fluorobenzoate degradation
vpa00380  Tryptophan metabolism
vpa00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vpa00401  Novobiocin biosynthesis
vpa00410  beta-Alanine metabolism
vpa00430  Taurine and hypotaurine metabolism
vpa00440  Phosphonate and phosphinate metabolism
vpa00450  Selenocompound metabolism
vpa00460  Cyanoamino acid metabolism
vpa00470  D-Amino acid metabolism
vpa00480  Glutathione metabolism
vpa00500  Starch and sucrose metabolism
vpa00511  Other glycan degradation
vpa00520  Amino sugar and nucleotide sugar metabolism
vpa00521  Streptomycin biosynthesis
vpa00523  Polyketide sugar unit biosynthesis
vpa00525  Acarbose and validamycin biosynthesis
vpa00540  Lipopolysaccharide biosynthesis
vpa00541  O-Antigen nucleotide sugar biosynthesis
vpa00543  Exopolysaccharide biosynthesis
vpa00550  Peptidoglycan biosynthesis
vpa00552  Teichoic acid biosynthesis
vpa00561  Glycerolipid metabolism
vpa00562  Inositol phosphate metabolism
vpa00564  Glycerophospholipid metabolism
vpa00565  Ether lipid metabolism
vpa00592  alpha-Linolenic acid metabolism
vpa00600  Sphingolipid metabolism
vpa00620  Pyruvate metabolism
vpa00623  Toluene degradation
vpa00625  Chloroalkane and chloroalkene degradation
vpa00626  Naphthalene degradation
vpa00627  Aminobenzoate degradation
vpa00630  Glyoxylate and dicarboxylate metabolism
vpa00633  Nitrotoluene degradation
vpa00640  Propanoate metabolism
vpa00643  Styrene degradation
vpa00650  Butanoate metabolism
vpa00660  C5-Branched dibasic acid metabolism
vpa00670  One carbon pool by folate
vpa00680  Methane metabolism
vpa00710  Carbon fixation by Calvin cycle
vpa00720  Other carbon fixation pathways
vpa00730  Thiamine metabolism
vpa00740  Riboflavin metabolism
vpa00750  Vitamin B6 metabolism
vpa00760  Nicotinate and nicotinamide metabolism
vpa00770  Pantothenate and CoA biosynthesis
vpa00780  Biotin metabolism
vpa00785  Lipoic acid metabolism
vpa00790  Folate biosynthesis
vpa00860  Porphyrin metabolism
vpa00900  Terpenoid backbone biosynthesis
vpa00907  Pinene, camphor and geraniol degradation
vpa00910  Nitrogen metabolism
vpa00920  Sulfur metabolism
vpa00930  Caprolactam degradation
vpa00999  Biosynthesis of various plant secondary metabolites
vpa01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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