KEGG   PATHWAY: vpf01100
Entry
vpf01100                    Pathway                                
Name
Metabolic pathways - Vibrio parahaemolyticus O1:Kuk FDA_R31
Class
Pathway map
vpf01100  Metabolic pathways
vpf01100

Module
vpf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vpf01100]
vpf_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vpf01100]
vpf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vpf01100]
vpf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vpf01100]
vpf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vpf01100]
vpf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vpf01100]
vpf_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vpf01100]
vpf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vpf01100]
vpf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vpf01100]
vpf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vpf01100]
vpf_M00012  Glyoxylate cycle [PATH:vpf01100]
vpf_M00015  Proline biosynthesis, glutamate => proline [PATH:vpf01100]
vpf_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vpf01100]
vpf_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vpf01100]
vpf_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vpf01100]
vpf_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vpf01100]
vpf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vpf01100]
vpf_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vpf01100]
vpf_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vpf01100]
vpf_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vpf01100]
vpf_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vpf01100]
vpf_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vpf01100]
vpf_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vpf01100]
vpf_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vpf01100]
vpf_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vpf01100]
vpf_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:vpf01100]
vpf_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:vpf01100]
vpf_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vpf01100]
vpf_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vpf01100]
vpf_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vpf01100]
vpf_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vpf01100]
vpf_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vpf01100]
vpf_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vpf01100]
vpf_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vpf01100]
vpf_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vpf01100]
vpf_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vpf01100]
vpf_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vpf01100]
vpf_M00082  Fatty acid biosynthesis, initiation [PATH:vpf01100]
vpf_M00083  Fatty acid biosynthesis, elongation [PATH:vpf01100]
vpf_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vpf01100]
vpf_M00087  beta-Oxidation [PATH:vpf01100]
vpf_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vpf01100]
vpf_M00096  C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:vpf01100]
vpf_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vpf01100]
vpf_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vpf01100]
vpf_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vpf01100]
vpf_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vpf01100]
vpf_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vpf01100]
vpf_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vpf01100]
vpf_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vpf01100]
vpf_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vpf01100]
vpf_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vpf01100]
vpf_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vpf01100]
vpf_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vpf01100]
vpf_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vpf01100]
vpf_M00140  C1-unit interconversion, prokaryotes [PATH:vpf01100]
vpf_M00149  Succinate dehydrogenase, prokaryotes [PATH:vpf01100]
vpf_M00150  Fumarate reductase, prokaryotes [PATH:vpf01100]
vpf_M00151  Cytochrome bc1 complex respiratory unit [PATH:vpf01100]
vpf_M00155  Cytochrome c oxidase, prokaryotes [PATH:vpf01100]
vpf_M00156  Cytochrome c oxidase, cbb3-type [PATH:vpf01100]
vpf_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vpf01100]
vpf_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vpf01100]
vpf_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vpf01100]
vpf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vpf01100]
vpf_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vpf01100]
vpf_M00417  Cytochrome o ubiquinol oxidase [PATH:vpf01100]
vpf_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vpf01100]
vpf_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vpf01100]
vpf_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vpf01100]
vpf_M00555  Betaine biosynthesis, choline => betaine [PATH:vpf01100]
vpf_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vpf01100]
vpf_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vpf01100]
vpf_M00621  Glycine cleavage system [PATH:vpf01100]
vpf_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vpf01100]
vpf_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vpf01100]
vpf_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vpf01100]
vpf_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:vpf01100]
vpf_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vpf01100]
vpf_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vpf01100]
vpf_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vpf01100]
vpf_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:vpf01100]
vpf_M00970  Proline degradation, proline => glutamate [PATH:vpf01100]
Organism
Vibrio parahaemolyticus O1:Kuk FDA_R31 [GN:vpf]
Related
pathway
vpf00010  Glycolysis / Gluconeogenesis
vpf00020  Citrate cycle (TCA cycle)
vpf00030  Pentose phosphate pathway
vpf00040  Pentose and glucuronate interconversions
vpf00051  Fructose and mannose metabolism
vpf00052  Galactose metabolism
vpf00053  Ascorbate and aldarate metabolism
vpf00061  Fatty acid biosynthesis
vpf00071  Fatty acid degradation
vpf00074  Mycolic acid biosynthesis
vpf00130  Ubiquinone and other terpenoid-quinone biosynthesis
vpf00190  Oxidative phosphorylation
vpf00220  Arginine biosynthesis
vpf00230  Purine metabolism
vpf00240  Pyrimidine metabolism
vpf00250  Alanine, aspartate and glutamate metabolism
vpf00260  Glycine, serine and threonine metabolism
vpf00261  Monobactam biosynthesis
vpf00270  Cysteine and methionine metabolism
vpf00280  Valine, leucine and isoleucine degradation
vpf00290  Valine, leucine and isoleucine biosynthesis
vpf00300  Lysine biosynthesis
vpf00310  Lysine degradation
vpf00330  Arginine and proline metabolism
vpf00332  Carbapenem biosynthesis
vpf00340  Histidine metabolism
vpf00350  Tyrosine metabolism
vpf00360  Phenylalanine metabolism
vpf00361  Chlorocyclohexane and chlorobenzene degradation
vpf00362  Benzoate degradation
vpf00364  Fluorobenzoate degradation
vpf00380  Tryptophan metabolism
vpf00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vpf00401  Novobiocin biosynthesis
vpf00410  beta-Alanine metabolism
vpf00430  Taurine and hypotaurine metabolism
vpf00440  Phosphonate and phosphinate metabolism
vpf00450  Selenocompound metabolism
vpf00460  Cyanoamino acid metabolism
vpf00470  D-Amino acid metabolism
vpf00480  Glutathione metabolism
vpf00500  Starch and sucrose metabolism
vpf00511  Other glycan degradation
vpf00520  Amino sugar and nucleotide sugar metabolism
vpf00521  Streptomycin biosynthesis
vpf00523  Polyketide sugar unit biosynthesis
vpf00525  Acarbose and validamycin biosynthesis
vpf00540  Lipopolysaccharide biosynthesis
vpf00541  O-Antigen nucleotide sugar biosynthesis
vpf00543  Exopolysaccharide biosynthesis
vpf00550  Peptidoglycan biosynthesis
vpf00552  Teichoic acid biosynthesis
vpf00561  Glycerolipid metabolism
vpf00562  Inositol phosphate metabolism
vpf00564  Glycerophospholipid metabolism
vpf00565  Ether lipid metabolism
vpf00592  alpha-Linolenic acid metabolism
vpf00600  Sphingolipid metabolism
vpf00620  Pyruvate metabolism
vpf00623  Toluene degradation
vpf00625  Chloroalkane and chloroalkene degradation
vpf00626  Naphthalene degradation
vpf00627  Aminobenzoate degradation
vpf00630  Glyoxylate and dicarboxylate metabolism
vpf00633  Nitrotoluene degradation
vpf00640  Propanoate metabolism
vpf00643  Styrene degradation
vpf00650  Butanoate metabolism
vpf00660  C5-Branched dibasic acid metabolism
vpf00670  One carbon pool by folate
vpf00680  Methane metabolism
vpf00710  Carbon fixation by Calvin cycle
vpf00720  Other carbon fixation pathways
vpf00730  Thiamine metabolism
vpf00740  Riboflavin metabolism
vpf00750  Vitamin B6 metabolism
vpf00760  Nicotinate and nicotinamide metabolism
vpf00770  Pantothenate and CoA biosynthesis
vpf00780  Biotin metabolism
vpf00785  Lipoic acid metabolism
vpf00790  Folate biosynthesis
vpf00860  Porphyrin metabolism
vpf00900  Terpenoid backbone biosynthesis
vpf00907  Pinene, camphor and geraniol degradation
vpf00910  Nitrogen metabolism
vpf00920  Sulfur metabolism
vpf00930  Caprolactam degradation
vpf00999  Biosynthesis of various plant secondary metabolites
vpf01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
LinkDB

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