KEGG   PATHWAY: vpf01200
Entry
vpf01200                    Pathway                                
Name
Carbon metabolism - Vibrio parahaemolyticus O1:Kuk FDA_R31
Description
Carbon metabolism is the most basic aspect of life. This map presents an overall view of central carbon metabolism, where the number of carbons is shown for each compound denoted by a circle, excluding a cofactor (CoA, CoM, THF, or THMPT) that is replaced by an asterisk. The map contains carbon utilization pathways of glycolysis (map00010), pentose phosphate pathway (map00030), and citrate cycle (map00020), and six known carbon fixation pathways (map00710 and map00720) as well as some pathways of methane metabolism (map00680). The six carbon fixation pathways are: (1) reductive pentose phosphate cycle (Calvin cycle) in plants and cyanobacteria that perform oxygenic photosynthesis, (2) reductive citrate cycle in photosynthetic green sulfur bacteria and some chemolithoautotrophs, (3) 3-hydroxypropionate bi-cycle in photosynthetic green nonsulfur bacteria, two variants of 4-hydroxybutyrate pathways in Crenarchaeota called (4) hydroxypropionate-hydroxybutyrate cycle and (5) dicarboxylate-hydroxybutyrate cycle, and (6) reductive acetyl-CoA pathway in methanogenic bacteria.
Class
Pathway map
vpf01200  Carbon metabolism
vpf01200

Module
vpf_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vpf01200]
vpf_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vpf01200]
vpf_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vpf01200]
vpf_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vpf01200]
vpf_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vpf01200]
vpf_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vpf01200]
vpf_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vpf01200]
vpf_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vpf01200]
vpf_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vpf01200]
vpf_M00012  Glyoxylate cycle [PATH:vpf01200]
vpf_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vpf01200]
vpf_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vpf01200]
vpf_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vpf01200]
vpf_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vpf01200]
vpf_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vpf01200]
vpf_M00621  Glycine cleavage system [PATH:vpf01200]
Organism
Vibrio parahaemolyticus O1:Kuk FDA_R31 [GN:vpf]
KO pathway
ko01200   
LinkDB

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