KEGG   PATHWAY: vpn01100
Entry
vpn01100                    Pathway                                
Name
Metabolic pathways - Virgibacillus dokdonensis
Class
Pathway map
vpn01100  Metabolic pathways
vpn01100

Module
vpn_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:vpn01100]
vpn_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vpn01100]
vpn_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vpn01100]
vpn_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vpn01100]
vpn_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vpn01100]
vpn_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vpn01100]
vpn_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vpn01100]
vpn_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vpn01100]
vpn_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vpn01100]
vpn_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vpn01100]
vpn_M00012  Glyoxylate cycle [PATH:vpn01100]
vpn_M00015  Proline biosynthesis, glutamate => proline [PATH:vpn01100]
vpn_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vpn01100]
vpn_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vpn01100]
vpn_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vpn01100]
vpn_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vpn01100]
vpn_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vpn01100]
vpn_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vpn01100]
vpn_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vpn01100]
vpn_M00033  Ectoine biosynthesis, aspartate => ectoine [PATH:vpn01100]
vpn_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vpn01100]
vpn_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vpn01100]
vpn_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vpn01100]
vpn_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vpn01100]
vpn_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vpn01100]
vpn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vpn01100]
vpn_M00082  Fatty acid biosynthesis, initiation [PATH:vpn01100]
vpn_M00083  Fatty acid biosynthesis, elongation [PATH:vpn01100]
vpn_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vpn01100]
vpn_M00087  beta-Oxidation [PATH:vpn01100]
vpn_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vpn01100]
vpn_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vpn01100]
vpn_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vpn01100]
vpn_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:vpn01100]
vpn_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vpn01100]
vpn_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vpn01100]
vpn_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vpn01100]
vpn_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vpn01100]
vpn_M00140  C1-unit interconversion, prokaryotes [PATH:vpn01100]
vpn_M00151  Cytochrome bc1 complex respiratory unit [PATH:vpn01100]
vpn_M00155  Cytochrome c oxidase, prokaryotes [PATH:vpn01100]
vpn_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vpn01100]
vpn_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vpn01100]
vpn_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vpn01100]
vpn_M00364  C10-C20 isoprenoid biosynthesis, bacteria [PATH:vpn01100]
vpn_M00416  Cytochrome aa3-600 menaquinol oxidase [PATH:vpn01100]
vpn_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vpn01100]
vpn_M00525  Lysine biosynthesis, acetyl-DAP pathway, aspartate => lysine [PATH:vpn01100]
vpn_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine [PATH:vpn01100]
vpn_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:vpn01100]
vpn_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vpn01100]
vpn_M00555  Betaine biosynthesis, choline => betaine [PATH:vpn01100]
vpn_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vpn01100]
vpn_M00577  Biotin biosynthesis, BioW pathway, pimelate => pimeloyl-CoA => biotin [PATH:vpn01100]
vpn_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vpn01100]
vpn_M00621  Glycine cleavage system [PATH:vpn01100]
vpn_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vpn01100]
vpn_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vpn01100]
vpn_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:vpn01100]
vpn_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vpn01100]
vpn_M00883  Lipoic acid biosynthesis, animals and bacteria, octanoyl-ACP => dihydrolipoyl-H => dihydrolipoyl-E2 [PATH:vpn01100]
vpn_M00899  Thiamine salvage pathway, HMP/HET => TMP [PATH:vpn01100]
vpn_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:vpn01100]
vpn_M00916  Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:vpn01100]
vpn_M00926  Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:vpn01100]
vpn_M00970  Proline degradation, proline => glutamate [PATH:vpn01100]
vpn_M00972  Proline metabolism [PATH:vpn01100]
Organism
Virgibacillus dokdonensis [GN:vpn]
Related
pathway
vpn00010  Glycolysis / Gluconeogenesis
vpn00020  Citrate cycle (TCA cycle)
vpn00030  Pentose phosphate pathway
vpn00040  Pentose and glucuronate interconversions
vpn00051  Fructose and mannose metabolism
vpn00052  Galactose metabolism
vpn00053  Ascorbate and aldarate metabolism
vpn00061  Fatty acid biosynthesis
vpn00071  Fatty acid degradation
vpn00100  Steroid biosynthesis
vpn00130  Ubiquinone and other terpenoid-quinone biosynthesis
vpn00190  Oxidative phosphorylation
vpn00220  Arginine biosynthesis
vpn00230  Purine metabolism
vpn00240  Pyrimidine metabolism
vpn00250  Alanine, aspartate and glutamate metabolism
vpn00260  Glycine, serine and threonine metabolism
vpn00261  Monobactam biosynthesis
vpn00270  Cysteine and methionine metabolism
vpn00280  Valine, leucine and isoleucine degradation
vpn00290  Valine, leucine and isoleucine biosynthesis
vpn00300  Lysine biosynthesis
vpn00310  Lysine degradation
vpn00311  Penicillin and cephalosporin biosynthesis
vpn00330  Arginine and proline metabolism
vpn00332  Carbapenem biosynthesis
vpn00340  Histidine metabolism
vpn00350  Tyrosine metabolism
vpn00360  Phenylalanine metabolism
vpn00362  Benzoate degradation
vpn00380  Tryptophan metabolism
vpn00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vpn00401  Novobiocin biosynthesis
vpn00410  beta-Alanine metabolism
vpn00430  Taurine and hypotaurine metabolism
vpn00440  Phosphonate and phosphinate metabolism
vpn00450  Selenocompound metabolism
vpn00460  Cyanoamino acid metabolism
vpn00470  D-Amino acid metabolism
vpn00480  Glutathione metabolism
vpn00500  Starch and sucrose metabolism
vpn00511  Other glycan degradation
vpn00520  Amino sugar and nucleotide sugar metabolism
vpn00521  Streptomycin biosynthesis
vpn00540  Lipopolysaccharide biosynthesis
vpn00541  O-Antigen nucleotide sugar biosynthesis
vpn00542  O-Antigen repeat unit biosynthesis
vpn00543  Exopolysaccharide biosynthesis
vpn00550  Peptidoglycan biosynthesis
vpn00552  Teichoic acid biosynthesis
vpn00561  Glycerolipid metabolism
vpn00562  Inositol phosphate metabolism
vpn00564  Glycerophospholipid metabolism
vpn00565  Ether lipid metabolism
vpn00592  alpha-Linolenic acid metabolism
vpn00600  Sphingolipid metabolism
vpn00620  Pyruvate metabolism
vpn00622  Xylene degradation
vpn00625  Chloroalkane and chloroalkene degradation
vpn00626  Naphthalene degradation
vpn00627  Aminobenzoate degradation
vpn00630  Glyoxylate and dicarboxylate metabolism
vpn00640  Propanoate metabolism
vpn00643  Styrene degradation
vpn00650  Butanoate metabolism
vpn00660  C5-Branched dibasic acid metabolism
vpn00670  One carbon pool by folate
vpn00680  Methane metabolism
vpn00710  Carbon fixation by Calvin cycle
vpn00720  Other carbon fixation pathways
vpn00730  Thiamine metabolism
vpn00740  Riboflavin metabolism
vpn00750  Vitamin B6 metabolism
vpn00760  Nicotinate and nicotinamide metabolism
vpn00770  Pantothenate and CoA biosynthesis
vpn00780  Biotin metabolism
vpn00785  Lipoic acid metabolism
vpn00790  Folate biosynthesis
vpn00860  Porphyrin metabolism
vpn00900  Terpenoid backbone biosynthesis
vpn00907  Pinene, camphor and geraniol degradation
vpn00909  Sesquiterpenoid and triterpenoid biosynthesis
vpn00910  Nitrogen metabolism
vpn00920  Sulfur metabolism
vpn00946  Degradation of flavonoids
vpn00999  Biosynthesis of various plant secondary metabolites
KO pathway
ko01100   
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