PATHWAY: vsc01100 Help Entry vsc01100                    Pathway                                 Name Metabolic pathways - Vibrio scophthalmi Class BRITE hierarchy Pathway map vsc01100   Metabolic pathways Module vsc_M00002   Glycolysis, core module involving three-carbon compounds [PATH:vsc01100] vsc_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vsc01100] vsc_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vsc01100] vsc_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:vsc01100] vsc_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vsc01100] vsc_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vsc01100] vsc_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vsc01100] vsc_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:vsc01100] vsc_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vsc01100] vsc_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vsc01100] vsc_M00012   Glyoxylate cycle [PATH:vsc01100] vsc_M00015   Proline biosynthesis, glutamate => proline [PATH:vsc01100] vsc_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vsc01100] vsc_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vsc01100] vsc_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vsc01100] vsc_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vsc01100] vsc_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:vsc01100] vsc_M00021   Cysteine biosynthesis, serine => cysteine [PATH:vsc01100] vsc_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vsc01100] vsc_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:vsc01100] vsc_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vsc01100] vsc_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vsc01100] vsc_M00026   Histidine biosynthesis, PRPP => histidine [PATH:vsc01100] vsc_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:vsc01100] vsc_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:vsc01100] vsc_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vsc01100] vsc_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vsc01100] vsc_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vsc01100] vsc_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vsc01100] vsc_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vsc01100] vsc_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vsc01100] vsc_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vsc01100] vsc_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vsc01100] vsc_M00063   CMP-KDO biosynthesis [PATH:vsc01100] vsc_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vsc01100] vsc_M00082   Fatty acid biosynthesis, initiation [PATH:vsc01100] vsc_M00083   Fatty acid biosynthesis, elongation [PATH:vsc01100] vsc_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:vsc01100] vsc_M00087   beta-Oxidation [PATH:vsc01100] vsc_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vsc01100] vsc_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vsc01100] vsc_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vsc01100] vsc_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vsc01100] vsc_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:vsc01100] vsc_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:vsc01100] vsc_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vsc01100] vsc_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vsc01100] vsc_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vsc01100] vsc_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vsc01100] vsc_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vsc01100] vsc_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vsc01100] vsc_M00140   C1-unit interconversion, prokaryotes [PATH:vsc01100] vsc_M00149   Succinate dehydrogenase, prokaryotes [PATH:vsc01100] vsc_M00150   Fumarate reductase, prokaryotes [PATH:vsc01100] vsc_M00151   Cytochrome bc1 complex respiratory unit [PATH:vsc01100] vsc_M00155   Cytochrome c oxidase, prokaryotes [PATH:vsc01100] vsc_M00156   Cytochrome c oxidase, cbb3-type [PATH:vsc01100] vsc_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:vsc01100] vsc_M00168   CAM (Crassulacean acid metabolism), dark [PATH:vsc01100] vsc_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:vsc01100] vsc_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vsc01100] vsc_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vsc01100] vsc_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vsc01100] vsc_M00550   Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:vsc01100] vsc_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vsc01100] vsc_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vsc01100] vsc_M00621   Glycine cleavage system [PATH:vsc01100] vsc_M00844   Arginine biosynthesis, ornithine => arginine [PATH:vsc01100] vsc_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vsc01100] vsc_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vsc01100] vsc_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vsc01100] vsc_M00970   Proline degradation, proline => glutamate [PATH:vsc01100] Organism Vibrio scophthalmi [GN:vsc] Related pathway vsc00010   Glycolysis / Gluconeogenesis vsc00020   Citrate cycle (TCA cycle) vsc00030   Pentose phosphate pathway vsc00040   Pentose and glucuronate interconversions vsc00051   Fructose and mannose metabolism vsc00052   Galactose metabolism vsc00053   Ascorbate and aldarate metabolism vsc00061   Fatty acid biosynthesis vsc00071   Fatty acid degradation vsc00121   Secondary bile acid biosynthesis vsc00130   Ubiquinone and other terpenoid-quinone biosynthesis vsc00190   Oxidative phosphorylation vsc00220   Arginine biosynthesis vsc00230   Purine metabolism vsc00240   Pyrimidine metabolism vsc00250   Alanine, aspartate and glutamate metabolism vsc00260   Glycine, serine and threonine metabolism vsc00261   Monobactam biosynthesis vsc00270   Cysteine and methionine metabolism vsc00280   Valine, leucine and isoleucine degradation vsc00290   Valine, leucine and isoleucine biosynthesis vsc00300   Lysine biosynthesis vsc00310   Lysine degradation vsc00330   Arginine and proline metabolism vsc00332   Carbapenem biosynthesis vsc00340   Histidine metabolism vsc00350   Tyrosine metabolism vsc00360   Phenylalanine metabolism vsc00362   Benzoate degradation vsc00380   Tryptophan metabolism vsc00400   Phenylalanine, tyrosine and tryptophan biosynthesis vsc00401   Novobiocin biosynthesis vsc00410   beta-Alanine metabolism vsc00430   Taurine and hypotaurine metabolism vsc00450   Selenocompound metabolism vsc00460   Cyanoamino acid metabolism vsc00470   D-Amino acid metabolism vsc00480   Glutathione metabolism vsc00500   Starch and sucrose metabolism vsc00511   Other glycan degradation vsc00520   Amino sugar and nucleotide sugar metabolism vsc00521   Streptomycin biosynthesis vsc00540   Lipopolysaccharide biosynthesis vsc00541   O-Antigen nucleotide sugar biosynthesis vsc00543   Exopolysaccharide biosynthesis vsc00550   Peptidoglycan biosynthesis vsc00552   Teichoic acid biosynthesis vsc00561   Glycerolipid metabolism vsc00562   Inositol phosphate metabolism vsc00564   Glycerophospholipid metabolism vsc00565   Ether lipid metabolism vsc00592   alpha-Linolenic acid metabolism vsc00600   Sphingolipid metabolism vsc00620   Pyruvate metabolism vsc00625   Chloroalkane and chloroalkene degradation vsc00626   Naphthalene degradation vsc00627   Aminobenzoate degradation vsc00630   Glyoxylate and dicarboxylate metabolism vsc00640   Propanoate metabolism vsc00643   Styrene degradation vsc00650   Butanoate metabolism vsc00660   C5-Branched dibasic acid metabolism vsc00670   One carbon pool by folate vsc00680   Methane metabolism vsc00730   Thiamine metabolism vsc00740   Riboflavin metabolism vsc00750   Vitamin B6 metabolism vsc00760   Nicotinate and nicotinamide metabolism vsc00770   Pantothenate and CoA biosynthesis vsc00780   Biotin metabolism vsc00785   Lipoic acid metabolism vsc00790   Folate biosynthesis vsc00860   Porphyrin metabolism vsc00900   Terpenoid backbone biosynthesis vsc00907   Pinene, camphor and geraniol degradation vsc00910   Nitrogen metabolism vsc00920   Sulfur metabolism vsc00930   Caprolactam degradation vsc00999   Biosynthesis of various plant secondary metabolites vsc01040   Biosynthesis of unsaturated fatty acids KO pathway ko01100     LinkDB All DBs

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