KEGG   PATHWAY: vvy01100
Entry
vvy01100                    Pathway                                
Name
Metabolic pathways - Vibrio vulnificus YJ016
Class
Pathway map
vvy01100  Metabolic pathways
vvy01100

Module
vvy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:vvy01100]
vvy_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:vvy01100]
vvy_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:vvy01100]
vvy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:vvy01100]
vvy_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:vvy01100]
vvy_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:vvy01100]
vvy_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:vvy01100]
vvy_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:vvy01100]
vvy_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:vvy01100]
vvy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:vvy01100]
vvy_M00012  Glyoxylate cycle [PATH:vvy01100]
vvy_M00015  Proline biosynthesis, glutamate => proline [PATH:vvy01100]
vvy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:vvy01100]
vvy_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:vvy01100]
vvy_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:vvy01100]
vvy_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:vvy01100]
vvy_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:vvy01100]
vvy_M00021  Cysteine biosynthesis, serine => cysteine [PATH:vvy01100]
vvy_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:vvy01100]
vvy_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:vvy01100]
vvy_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:vvy01100]
vvy_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:vvy01100]
vvy_M00026  Histidine biosynthesis, PRPP => histidine [PATH:vvy01100]
vvy_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:vvy01100]
vvy_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:vvy01100]
vvy_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:vvy01100]
vvy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:vvy01100]
vvy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:vvy01100]
vvy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:vvy01100]
vvy_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:vvy01100]
vvy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:vvy01100]
vvy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:vvy01100]
vvy_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:vvy01100]
vvy_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:vvy01100]
vvy_M00063  CMP-KDO biosynthesis [PATH:vvy01100]
vvy_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:vvy01100]
vvy_M00082  Fatty acid biosynthesis, initiation [PATH:vvy01100]
vvy_M00083  Fatty acid biosynthesis, elongation [PATH:vvy01100]
vvy_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:vvy01100]
vvy_M00087  beta-Oxidation [PATH:vvy01100]
vvy_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:vvy01100]
vvy_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:vvy01100]
vvy_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:vvy01100]
vvy_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:vvy01100]
vvy_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:vvy01100]
vvy_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:vvy01100]
vvy_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:vvy01100]
vvy_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:vvy01100]
vvy_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:vvy01100]
vvy_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:vvy01100]
vvy_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:vvy01100]
vvy_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:vvy01100]
vvy_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:vvy01100]
vvy_M00140  C1-unit interconversion, prokaryotes [PATH:vvy01100]
vvy_M00149  Succinate dehydrogenase, prokaryotes [PATH:vvy01100]
vvy_M00150  Fumarate reductase, prokaryotes [PATH:vvy01100]
vvy_M00151  Cytochrome bc1 complex respiratory unit [PATH:vvy01100]
vvy_M00155  Cytochrome c oxidase, prokaryotes [PATH:vvy01100]
vvy_M00156  Cytochrome c oxidase, cbb3-type [PATH:vvy01100]
vvy_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:vvy01100]
vvy_M00168  CAM (Crassulacean acid metabolism), dark [PATH:vvy01100]
vvy_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:vvy01100]
vvy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:vvy01100]
vvy_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:vvy01100]
vvy_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:vvy01100]
vvy_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:vvy01100]
vvy_M00550  Ascorbate degradation, ascorbate => D-xylulose-5P [PATH:vvy01100]
vvy_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:vvy01100]
vvy_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:vvy01100]
vvy_M00555  Betaine biosynthesis, choline => betaine [PATH:vvy01100]
vvy_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:vvy01100]
vvy_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:vvy01100]
vvy_M00621  Glycine cleavage system [PATH:vvy01100]
vvy_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:vvy01100]
vvy_M00793  dTDP-L-rhamnose biosynthesis [PATH:vvy01100]
vvy_M00844  Arginine biosynthesis, ornithine => arginine [PATH:vvy01100]
vvy_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:vvy01100]
vvy_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:vvy01100]
vvy_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:vvy01100]
vvy_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:vvy01100]
vvy_M00970  Proline degradation, proline => glutamate [PATH:vvy01100]
Organism
Vibrio vulnificus YJ016 [GN:vvy]
Related
pathway
vvy00010  Glycolysis / Gluconeogenesis
vvy00020  Citrate cycle (TCA cycle)
vvy00030  Pentose phosphate pathway
vvy00040  Pentose and glucuronate interconversions
vvy00051  Fructose and mannose metabolism
vvy00052  Galactose metabolism
vvy00053  Ascorbate and aldarate metabolism
vvy00061  Fatty acid biosynthesis
vvy00071  Fatty acid degradation
vvy00130  Ubiquinone and other terpenoid-quinone biosynthesis
vvy00190  Oxidative phosphorylation
vvy00220  Arginine biosynthesis
vvy00230  Purine metabolism
vvy00240  Pyrimidine metabolism
vvy00250  Alanine, aspartate and glutamate metabolism
vvy00260  Glycine, serine and threonine metabolism
vvy00261  Monobactam biosynthesis
vvy00270  Cysteine and methionine metabolism
vvy00280  Valine, leucine and isoleucine degradation
vvy00290  Valine, leucine and isoleucine biosynthesis
vvy00300  Lysine biosynthesis
vvy00310  Lysine degradation
vvy00330  Arginine and proline metabolism
vvy00332  Carbapenem biosynthesis
vvy00340  Histidine metabolism
vvy00350  Tyrosine metabolism
vvy00360  Phenylalanine metabolism
vvy00361  Chlorocyclohexane and chlorobenzene degradation
vvy00362  Benzoate degradation
vvy00364  Fluorobenzoate degradation
vvy00380  Tryptophan metabolism
vvy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
vvy00401  Novobiocin biosynthesis
vvy00410  beta-Alanine metabolism
vvy00430  Taurine and hypotaurine metabolism
vvy00440  Phosphonate and phosphinate metabolism
vvy00450  Selenocompound metabolism
vvy00460  Cyanoamino acid metabolism
vvy00470  D-Amino acid metabolism
vvy00480  Glutathione metabolism
vvy00500  Starch and sucrose metabolism
vvy00511  Other glycan degradation
vvy00520  Amino sugar and nucleotide sugar metabolism
vvy00521  Streptomycin biosynthesis
vvy00523  Polyketide sugar unit biosynthesis
vvy00525  Acarbose and validamycin biosynthesis
vvy00540  Lipopolysaccharide biosynthesis
vvy00541  O-Antigen nucleotide sugar biosynthesis
vvy00543  Exopolysaccharide biosynthesis
vvy00550  Peptidoglycan biosynthesis
vvy00552  Teichoic acid biosynthesis
vvy00561  Glycerolipid metabolism
vvy00562  Inositol phosphate metabolism
vvy00564  Glycerophospholipid metabolism
vvy00565  Ether lipid metabolism
vvy00592  alpha-Linolenic acid metabolism
vvy00600  Sphingolipid metabolism
vvy00620  Pyruvate metabolism
vvy00623  Toluene degradation
vvy00625  Chloroalkane and chloroalkene degradation
vvy00626  Naphthalene degradation
vvy00627  Aminobenzoate degradation
vvy00630  Glyoxylate and dicarboxylate metabolism
vvy00633  Nitrotoluene degradation
vvy00640  Propanoate metabolism
vvy00643  Styrene degradation
vvy00650  Butanoate metabolism
vvy00660  C5-Branched dibasic acid metabolism
vvy00670  One carbon pool by folate
vvy00680  Methane metabolism
vvy00730  Thiamine metabolism
vvy00740  Riboflavin metabolism
vvy00750  Vitamin B6 metabolism
vvy00760  Nicotinate and nicotinamide metabolism
vvy00770  Pantothenate and CoA biosynthesis
vvy00780  Biotin metabolism
vvy00785  Lipoic acid metabolism
vvy00790  Folate biosynthesis
vvy00860  Porphyrin metabolism
vvy00900  Terpenoid backbone biosynthesis
vvy00907  Pinene, camphor and geraniol degradation
vvy00910  Nitrogen metabolism
vvy00920  Sulfur metabolism
vvy00930  Caprolactam degradation
vvy00946  Degradation of flavonoids
vvy00999  Biosynthesis of various plant secondary metabolites
vvy01040  Biosynthesis of unsaturated fatty acids
vvy01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system