KEGG   PATHWAY: xcm01100
Entry
xcm01100                    Pathway                                
Name
Metabolic pathways - Xanthomonas citri pv. citri MN12
Class
Pathway map
xcm01100  Metabolic pathways
xcm01100

Module
xcm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xcm01100]
xcm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xcm01100]
xcm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xcm01100]
xcm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xcm01100]
xcm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xcm01100]
xcm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xcm01100]
xcm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xcm01100]
xcm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:xcm01100]
xcm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xcm01100]
xcm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xcm01100]
xcm_M00012  Glyoxylate cycle [PATH:xcm01100]
xcm_M00015  Proline biosynthesis, glutamate => proline [PATH:xcm01100]
xcm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xcm01100]
xcm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xcm01100]
xcm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xcm01100]
xcm_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xcm01100]
xcm_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:xcm01100]
xcm_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xcm01100]
xcm_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xcm01100]
xcm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:xcm01100]
xcm_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:xcm01100]
xcm_M00034  Methionine salvage pathway [PATH:xcm01100]
xcm_M00035  Methionine degradation [PATH:xcm01100]
xcm_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:xcm01100]
xcm_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:xcm01100]
xcm_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xcm01100]
xcm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xcm01100]
xcm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xcm01100]
xcm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xcm01100]
xcm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xcm01100]
xcm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xcm01100]
xcm_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xcm01100]
xcm_M00063  CMP-KDO biosynthesis [PATH:xcm01100]
xcm_M00082  Fatty acid biosynthesis, initiation [PATH:xcm01100]
xcm_M00083  Fatty acid biosynthesis, elongation [PATH:xcm01100]
xcm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:xcm01100]
xcm_M00087  beta-Oxidation [PATH:xcm01100]
xcm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xcm01100]
xcm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:xcm01100]
xcm_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xcm01100]
xcm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:xcm01100]
xcm_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xcm01100]
xcm_M00122  Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:xcm01100]
xcm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xcm01100]
xcm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xcm01100]
xcm_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:xcm01100]
xcm_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:xcm01100]
xcm_M00149  Succinate dehydrogenase, prokaryotes [PATH:xcm01100]
xcm_M00151  Cytochrome bc1 complex respiratory unit [PATH:xcm01100]
xcm_M00155  Cytochrome c oxidase, prokaryotes [PATH:xcm01100]
xcm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:xcm01100]
xcm_M00168  CAM (Crassulacean acid metabolism), dark [PATH:xcm01100]
xcm_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:xcm01100]
xcm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xcm01100]
xcm_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xcm01100]
xcm_M00417  Cytochrome o ubiquinol oxidase [PATH:xcm01100]
xcm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xcm01100]
xcm_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xcm01100]
xcm_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xcm01100]
xcm_M00555  Betaine biosynthesis, choline => betaine [PATH:xcm01100]
xcm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xcm01100]
xcm_M00621  Glycine cleavage system [PATH:xcm01100]
xcm_M00793  dTDP-L-rhamnose biosynthesis [PATH:xcm01100]
xcm_M00845  Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xcm01100]
xcm_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xcm01100]
xcm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xcm01100]
xcm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xcm01100]
xcm_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xcm01100]
xcm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xcm01100]
xcm_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xcm01100]
xcm_M00958  Adenine ribonucleotide degradation, AMP => Urate [PATH:xcm01100]
xcm_M00970  Proline degradation, proline => glutamate [PATH:xcm01100]
Organism
Xanthomonas citri pv. citri MN12 [GN:xcm]
Related
pathway
xcm00010  Glycolysis / Gluconeogenesis
xcm00020  Citrate cycle (TCA cycle)
xcm00030  Pentose phosphate pathway
xcm00040  Pentose and glucuronate interconversions
xcm00051  Fructose and mannose metabolism
xcm00052  Galactose metabolism
xcm00053  Ascorbate and aldarate metabolism
xcm00061  Fatty acid biosynthesis
xcm00071  Fatty acid degradation
xcm00130  Ubiquinone and other terpenoid-quinone biosynthesis
xcm00190  Oxidative phosphorylation
xcm00220  Arginine biosynthesis
xcm00230  Purine metabolism
xcm00240  Pyrimidine metabolism
xcm00250  Alanine, aspartate and glutamate metabolism
xcm00260  Glycine, serine and threonine metabolism
xcm00261  Monobactam biosynthesis
xcm00270  Cysteine and methionine metabolism
xcm00280  Valine, leucine and isoleucine degradation
xcm00290  Valine, leucine and isoleucine biosynthesis
xcm00300  Lysine biosynthesis
xcm00310  Lysine degradation
xcm00311  Penicillin and cephalosporin biosynthesis
xcm00330  Arginine and proline metabolism
xcm00332  Carbapenem biosynthesis
xcm00340  Histidine metabolism
xcm00350  Tyrosine metabolism
xcm00360  Phenylalanine metabolism
xcm00361  Chlorocyclohexane and chlorobenzene degradation
xcm00362  Benzoate degradation
xcm00364  Fluorobenzoate degradation
xcm00380  Tryptophan metabolism
xcm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
xcm00401  Novobiocin biosynthesis
xcm00410  beta-Alanine metabolism
xcm00430  Taurine and hypotaurine metabolism
xcm00450  Selenocompound metabolism
xcm00460  Cyanoamino acid metabolism
xcm00470  D-Amino acid metabolism
xcm00480  Glutathione metabolism
xcm00500  Starch and sucrose metabolism
xcm00511  Other glycan degradation
xcm00520  Amino sugar and nucleotide sugar metabolism
xcm00521  Streptomycin biosynthesis
xcm00523  Polyketide sugar unit biosynthesis
xcm00525  Acarbose and validamycin biosynthesis
xcm00540  Lipopolysaccharide biosynthesis
xcm00541  O-Antigen nucleotide sugar biosynthesis
xcm00543  Exopolysaccharide biosynthesis
xcm00550  Peptidoglycan biosynthesis
xcm00552  Teichoic acid biosynthesis
xcm00561  Glycerolipid metabolism
xcm00562  Inositol phosphate metabolism
xcm00564  Glycerophospholipid metabolism
xcm00565  Ether lipid metabolism
xcm00592  alpha-Linolenic acid metabolism
xcm00600  Sphingolipid metabolism
xcm00620  Pyruvate metabolism
xcm00622  Xylene degradation
xcm00623  Toluene degradation
xcm00625  Chloroalkane and chloroalkene degradation
xcm00626  Naphthalene degradation
xcm00627  Aminobenzoate degradation
xcm00630  Glyoxylate and dicarboxylate metabolism
xcm00633  Nitrotoluene degradation
xcm00640  Propanoate metabolism
xcm00643  Styrene degradation
xcm00650  Butanoate metabolism
xcm00660  C5-Branched dibasic acid metabolism
xcm00670  One carbon pool by folate
xcm00680  Methane metabolism
xcm00710  Carbon fixation by Calvin cycle
xcm00720  Other carbon fixation pathways
xcm00730  Thiamine metabolism
xcm00740  Riboflavin metabolism
xcm00750  Vitamin B6 metabolism
xcm00760  Nicotinate and nicotinamide metabolism
xcm00770  Pantothenate and CoA biosynthesis
xcm00780  Biotin metabolism
xcm00785  Lipoic acid metabolism
xcm00790  Folate biosynthesis
xcm00791  Atrazine degradation
xcm00860  Porphyrin metabolism
xcm00900  Terpenoid backbone biosynthesis
xcm00907  Pinene, camphor and geraniol degradation
xcm00910  Nitrogen metabolism
xcm00920  Sulfur metabolism
xcm00930  Caprolactam degradation
xcm00946  Degradation of flavonoids
xcm00996  Biosynthesis of various alkaloids
xcm00999  Biosynthesis of various plant secondary metabolites
xcm01040  Biosynthesis of unsaturated fatty acids
xcm01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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