PATHWAY: xfr01100 Help Entry xfr01100                    Pathway                                 Name Metabolic pathways - Xanthomonas fragariae Class BRITE hierarchy Pathway map xfr01100   Metabolic pathways Module xfr_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xfr01100] xfr_M00002   Glycolysis, core module involving three-carbon compounds [PATH:xfr01100] xfr_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xfr01100] xfr_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:xfr01100] xfr_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xfr01100] xfr_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xfr01100] xfr_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xfr01100] xfr_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:xfr01100] xfr_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xfr01100] xfr_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xfr01100] xfr_M00015   Proline biosynthesis, glutamate => proline [PATH:xfr01100] xfr_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xfr01100] xfr_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xfr01100] xfr_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xfr01100] xfr_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xfr01100] xfr_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:xfr01100] xfr_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xfr01100] xfr_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xfr01100] xfr_M00026   Histidine biosynthesis, PRPP => histidine [PATH:xfr01100] xfr_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:xfr01100] xfr_M00034   Methionine salvage pathway [PATH:xfr01100] xfr_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:xfr01100] xfr_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:xfr01100] xfr_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xfr01100] xfr_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xfr01100] xfr_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xfr01100] xfr_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xfr01100] xfr_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xfr01100] xfr_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xfr01100] xfr_M00063   CMP-KDO biosynthesis [PATH:xfr01100] xfr_M00082   Fatty acid biosynthesis, initiation [PATH:xfr01100] xfr_M00083   Fatty acid biosynthesis, elongation [PATH:xfr01100] xfr_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:xfr01100] xfr_M00087   beta-Oxidation [PATH:xfr01100] xfr_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:xfr01100] xfr_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xfr01100] xfr_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:xfr01100] xfr_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xfr01100] xfr_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:xfr01100] xfr_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xfr01100] xfr_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xfr01100] xfr_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xfr01100] xfr_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:xfr01100] xfr_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:xfr01100] xfr_M00149   Succinate dehydrogenase, prokaryotes [PATH:xfr01100] xfr_M00151   Cytochrome bc1 complex respiratory unit [PATH:xfr01100] xfr_M00155   Cytochrome c oxidase, prokaryotes [PATH:xfr01100] xfr_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:xfr01100] xfr_M00168   CAM (Crassulacean acid metabolism), dark [PATH:xfr01100] xfr_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:xfr01100] xfr_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xfr01100] xfr_M00417   Cytochrome o ubiquinol oxidase [PATH:xfr01100] xfr_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xfr01100] xfr_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xfr01100] xfr_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xfr01100] xfr_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xfr01100] xfr_M00621   Glycine cleavage system [PATH:xfr01100] xfr_M00793   dTDP-L-rhamnose biosynthesis [PATH:xfr01100] xfr_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xfr01100] xfr_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xfr01100] xfr_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xfr01100] xfr_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xfr01100] xfr_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xfr01100] xfr_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xfr01100] xfr_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xfr01100] xfr_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:xfr01100] xfr_M00970   Proline degradation, proline => glutamate [PATH:xfr01100] Organism Xanthomonas fragariae [GN:xfr] Related pathway xfr00010   Glycolysis / Gluconeogenesis xfr00020   Citrate cycle (TCA cycle) xfr00030   Pentose phosphate pathway xfr00040   Pentose and glucuronate interconversions xfr00051   Fructose and mannose metabolism xfr00052   Galactose metabolism xfr00053   Ascorbate and aldarate metabolism xfr00061   Fatty acid biosynthesis xfr00071   Fatty acid degradation xfr00130   Ubiquinone and other terpenoid-quinone biosynthesis xfr00190   Oxidative phosphorylation xfr00220   Arginine biosynthesis xfr00230   Purine metabolism xfr00240   Pyrimidine metabolism xfr00250   Alanine, aspartate and glutamate metabolism xfr00260   Glycine, serine and threonine metabolism xfr00261   Monobactam biosynthesis xfr00270   Cysteine and methionine metabolism xfr00280   Valine, leucine and isoleucine degradation xfr00290   Valine, leucine and isoleucine biosynthesis xfr00300   Lysine biosynthesis xfr00310   Lysine degradation xfr00330   Arginine and proline metabolism xfr00332   Carbapenem biosynthesis xfr00340   Histidine metabolism xfr00350   Tyrosine metabolism xfr00360   Phenylalanine metabolism xfr00361   Chlorocyclohexane and chlorobenzene degradation xfr00362   Benzoate degradation xfr00364   Fluorobenzoate degradation xfr00380   Tryptophan metabolism xfr00400   Phenylalanine, tyrosine and tryptophan biosynthesis xfr00401   Novobiocin biosynthesis xfr00410   beta-Alanine metabolism xfr00430   Taurine and hypotaurine metabolism xfr00450   Selenocompound metabolism xfr00460   Cyanoamino acid metabolism xfr00470   D-Amino acid metabolism xfr00480   Glutathione metabolism xfr00500   Starch and sucrose metabolism xfr00511   Other glycan degradation xfr00520   Amino sugar and nucleotide sugar metabolism xfr00521   Streptomycin biosynthesis xfr00523   Polyketide sugar unit biosynthesis xfr00525   Acarbose and validamycin biosynthesis xfr00540   Lipopolysaccharide biosynthesis xfr00541   O-Antigen nucleotide sugar biosynthesis xfr00543   Exopolysaccharide biosynthesis xfr00550   Peptidoglycan biosynthesis xfr00552   Teichoic acid biosynthesis xfr00561   Glycerolipid metabolism xfr00562   Inositol phosphate metabolism xfr00564   Glycerophospholipid metabolism xfr00592   alpha-Linolenic acid metabolism xfr00600   Sphingolipid metabolism xfr00620   Pyruvate metabolism xfr00623   Toluene degradation xfr00625   Chloroalkane and chloroalkene degradation xfr00626   Naphthalene degradation xfr00630   Glyoxylate and dicarboxylate metabolism xfr00633   Nitrotoluene degradation xfr00640   Propanoate metabolism xfr00643   Styrene degradation xfr00650   Butanoate metabolism xfr00660   C5-Branched dibasic acid metabolism xfr00670   One carbon pool by folate xfr00680   Methane metabolism xfr00710   Carbon fixation by Calvin cycle xfr00720   Other carbon fixation pathways xfr00730   Thiamine metabolism xfr00740   Riboflavin metabolism xfr00750   Vitamin B6 metabolism xfr00760   Nicotinate and nicotinamide metabolism xfr00770   Pantothenate and CoA biosynthesis xfr00780   Biotin metabolism xfr00785   Lipoic acid metabolism xfr00790   Folate biosynthesis xfr00860   Porphyrin metabolism xfr00900   Terpenoid backbone biosynthesis xfr00907   Pinene, camphor and geraniol degradation xfr00910   Nitrogen metabolism xfr00920   Sulfur metabolism xfr00930   Caprolactam degradation xfr00946   Degradation of flavonoids xfr00999   Biosynthesis of various plant secondary metabolites xfr01040   Biosynthesis of unsaturated fatty acids xfr01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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