PATHWAY: xhr01100 Help Entry xhr01100                    Pathway                                 Name Metabolic pathways - Xanthomonas hortorum Class BRITE hierarchy Pathway map xhr01100   Metabolic pathways Module xhr_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xhr01100] xhr_M00002   Glycolysis, core module involving three-carbon compounds [PATH:xhr01100] xhr_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xhr01100] xhr_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:xhr01100] xhr_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xhr01100] xhr_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xhr01100] xhr_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xhr01100] xhr_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:xhr01100] xhr_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xhr01100] xhr_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xhr01100] xhr_M00012   Glyoxylate cycle [PATH:xhr01100] xhr_M00015   Proline biosynthesis, glutamate => proline [PATH:xhr01100] xhr_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xhr01100] xhr_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xhr01100] xhr_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xhr01100] xhr_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:xhr01100] xhr_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xhr01100] xhr_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:xhr01100] xhr_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xhr01100] xhr_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xhr01100] xhr_M00026   Histidine biosynthesis, PRPP => histidine [PATH:xhr01100] xhr_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:xhr01100] xhr_M00034   Methionine salvage pathway [PATH:xhr01100] xhr_M00035   Methionine degradation [PATH:xhr01100] xhr_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:xhr01100] xhr_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:xhr01100] xhr_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xhr01100] xhr_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xhr01100] xhr_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xhr01100] xhr_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xhr01100] xhr_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xhr01100] xhr_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xhr01100] xhr_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xhr01100] xhr_M00063   CMP-KDO biosynthesis [PATH:xhr01100] xhr_M00082   Fatty acid biosynthesis, initiation [PATH:xhr01100] xhr_M00083   Fatty acid biosynthesis, elongation [PATH:xhr01100] xhr_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:xhr01100] xhr_M00087   beta-Oxidation [PATH:xhr01100] xhr_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:xhr01100] xhr_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xhr01100] xhr_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:xhr01100] xhr_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xhr01100] xhr_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:xhr01100] xhr_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xhr01100] xhr_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xhr01100] xhr_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xhr01100] xhr_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:xhr01100] xhr_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:xhr01100] xhr_M00149   Succinate dehydrogenase, prokaryotes [PATH:xhr01100] xhr_M00151   Cytochrome bc1 complex respiratory unit [PATH:xhr01100] xhr_M00155   Cytochrome c oxidase, prokaryotes [PATH:xhr01100] xhr_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:xhr01100] xhr_M00168   CAM (Crassulacean acid metabolism), dark [PATH:xhr01100] xhr_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:xhr01100] xhr_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xhr01100] xhr_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xhr01100] xhr_M00417   Cytochrome o ubiquinol oxidase [PATH:xhr01100] xhr_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xhr01100] xhr_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:xhr01100] xhr_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xhr01100] xhr_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xhr01100] xhr_M00555   Betaine biosynthesis, choline => betaine [PATH:xhr01100] xhr_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xhr01100] xhr_M00621   Glycine cleavage system [PATH:xhr01100] xhr_M00793   dTDP-L-rhamnose biosynthesis [PATH:xhr01100] xhr_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xhr01100] xhr_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xhr01100] xhr_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xhr01100] xhr_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xhr01100] xhr_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xhr01100] xhr_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xhr01100] xhr_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xhr01100] xhr_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:xhr01100] xhr_M00970   Proline degradation, proline => glutamate [PATH:xhr01100] Organism Xanthomonas hortorum [GN:xhr] Related pathway xhr00010   Glycolysis / Gluconeogenesis xhr00020   Citrate cycle (TCA cycle) xhr00030   Pentose phosphate pathway xhr00040   Pentose and glucuronate interconversions xhr00051   Fructose and mannose metabolism xhr00052   Galactose metabolism xhr00053   Ascorbate and aldarate metabolism xhr00061   Fatty acid biosynthesis xhr00071   Fatty acid degradation xhr00130   Ubiquinone and other terpenoid-quinone biosynthesis xhr00190   Oxidative phosphorylation xhr00220   Arginine biosynthesis xhr00230   Purine metabolism xhr00240   Pyrimidine metabolism xhr00250   Alanine, aspartate and glutamate metabolism xhr00260   Glycine, serine and threonine metabolism xhr00261   Monobactam biosynthesis xhr00270   Cysteine and methionine metabolism xhr00280   Valine, leucine and isoleucine degradation xhr00290   Valine, leucine and isoleucine biosynthesis xhr00300   Lysine biosynthesis xhr00310   Lysine degradation xhr00311   Penicillin and cephalosporin biosynthesis xhr00330   Arginine and proline metabolism xhr00332   Carbapenem biosynthesis xhr00340   Histidine metabolism xhr00350   Tyrosine metabolism xhr00360   Phenylalanine metabolism xhr00361   Chlorocyclohexane and chlorobenzene degradation xhr00362   Benzoate degradation xhr00364   Fluorobenzoate degradation xhr00380   Tryptophan metabolism xhr00400   Phenylalanine, tyrosine and tryptophan biosynthesis xhr00401   Novobiocin biosynthesis xhr00410   beta-Alanine metabolism xhr00430   Taurine and hypotaurine metabolism xhr00450   Selenocompound metabolism xhr00460   Cyanoamino acid metabolism xhr00470   D-Amino acid metabolism xhr00480   Glutathione metabolism xhr00500   Starch and sucrose metabolism xhr00511   Other glycan degradation xhr00520   Amino sugar and nucleotide sugar metabolism xhr00521   Streptomycin biosynthesis xhr00523   Polyketide sugar unit biosynthesis xhr00525   Acarbose and validamycin biosynthesis xhr00540   Lipopolysaccharide biosynthesis xhr00541   O-Antigen nucleotide sugar biosynthesis xhr00543   Exopolysaccharide biosynthesis xhr00550   Peptidoglycan biosynthesis xhr00552   Teichoic acid biosynthesis xhr00561   Glycerolipid metabolism xhr00562   Inositol phosphate metabolism xhr00564   Glycerophospholipid metabolism xhr00565   Ether lipid metabolism xhr00592   alpha-Linolenic acid metabolism xhr00600   Sphingolipid metabolism xhr00620   Pyruvate metabolism xhr00622   Xylene degradation xhr00623   Toluene degradation xhr00625   Chloroalkane and chloroalkene degradation xhr00626   Naphthalene degradation xhr00627   Aminobenzoate degradation xhr00630   Glyoxylate and dicarboxylate metabolism xhr00633   Nitrotoluene degradation xhr00640   Propanoate metabolism xhr00643   Styrene degradation xhr00650   Butanoate metabolism xhr00660   C5-Branched dibasic acid metabolism xhr00670   One carbon pool by folate xhr00680   Methane metabolism xhr00710   Carbon fixation by Calvin cycle xhr00720   Other carbon fixation pathways xhr00730   Thiamine metabolism xhr00740   Riboflavin metabolism xhr00750   Vitamin B6 metabolism xhr00760   Nicotinate and nicotinamide metabolism xhr00770   Pantothenate and CoA biosynthesis xhr00780   Biotin metabolism xhr00785   Lipoic acid metabolism xhr00790   Folate biosynthesis xhr00860   Porphyrin metabolism xhr00900   Terpenoid backbone biosynthesis xhr00903   Limonene degradation xhr00907   Pinene, camphor and geraniol degradation xhr00910   Nitrogen metabolism xhr00920   Sulfur metabolism xhr00930   Caprolactam degradation xhr00946   Degradation of flavonoids xhr00996   Biosynthesis of various alkaloids xhr00999   Biosynthesis of various plant secondary metabolites xhr01040   Biosynthesis of unsaturated fatty acids xhr01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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