KEGG   PATHWAY: xop01100
Entry
xop01100                    Pathway                                
Name
Metabolic pathways - Xanthomonas oryzae pv. oryzae PXO99A
Class
Pathway map
xop01100  Metabolic pathways
xop01100

Module
xop_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xop01100]
xop_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xop01100]
xop_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xop01100]
xop_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xop01100]
xop_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xop01100]
xop_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xop01100]
xop_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xop01100]
xop_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:xop01100]
xop_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xop01100]
xop_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xop01100]
xop_M00015  Proline biosynthesis, glutamate => proline [PATH:xop01100]
xop_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xop01100]
xop_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xop01100]
xop_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xop01100]
xop_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xop01100]
xop_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:xop01100]
xop_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xop01100]
xop_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xop01100]
xop_M00026  Histidine biosynthesis, PRPP => histidine [PATH:xop01100]
xop_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:xop01100]
xop_M00034  Methionine salvage pathway [PATH:xop01100]
xop_M00035  Methionine degradation [PATH:xop01100]
xop_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:xop01100]
xop_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xop01100]
xop_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xop01100]
xop_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xop01100]
xop_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xop01100]
xop_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xop01100]
xop_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xop01100]
xop_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xop01100]
xop_M00063  CMP-KDO biosynthesis [PATH:xop01100]
xop_M00082  Fatty acid biosynthesis, initiation [PATH:xop01100]
xop_M00083  Fatty acid biosynthesis, elongation [PATH:xop01100]
xop_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:xop01100]
xop_M00087  beta-Oxidation [PATH:xop01100]
xop_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xop01100]
xop_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:xop01100]
xop_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xop01100]
xop_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:xop01100]
xop_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xop01100]
xop_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xop01100]
xop_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xop01100]
xop_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:xop01100]
xop_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:xop01100]
xop_M00149  Succinate dehydrogenase, prokaryotes [PATH:xop01100]
xop_M00151  Cytochrome bc1 complex respiratory unit [PATH:xop01100]
xop_M00155  Cytochrome c oxidase, prokaryotes [PATH:xop01100]
xop_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:xop01100]
xop_M00168  CAM (Crassulacean acid metabolism), dark [PATH:xop01100]
xop_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:xop01100]
xop_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xop01100]
xop_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xop01100]
xop_M00417  Cytochrome o ubiquinol oxidase [PATH:xop01100]
xop_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xop01100]
xop_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xop01100]
xop_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xop01100]
xop_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xop01100]
xop_M00621  Glycine cleavage system [PATH:xop01100]
xop_M00793  dTDP-L-rhamnose biosynthesis [PATH:xop01100]
xop_M00845  Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xop01100]
xop_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xop01100]
xop_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xop01100]
xop_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xop01100]
xop_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xop01100]
xop_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xop01100]
xop_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xop01100]
xop_M00970  Proline degradation, proline => glutamate [PATH:xop01100]
Organism
Xanthomonas oryzae pv. oryzae PXO99A [GN:xop]
Related
pathway
xop00010  Glycolysis / Gluconeogenesis
xop00020  Citrate cycle (TCA cycle)
xop00030  Pentose phosphate pathway
xop00040  Pentose and glucuronate interconversions
xop00051  Fructose and mannose metabolism
xop00052  Galactose metabolism
xop00053  Ascorbate and aldarate metabolism
xop00061  Fatty acid biosynthesis
xop00071  Fatty acid degradation
xop00130  Ubiquinone and other terpenoid-quinone biosynthesis
xop00190  Oxidative phosphorylation
xop00220  Arginine biosynthesis
xop00230  Purine metabolism
xop00240  Pyrimidine metabolism
xop00250  Alanine, aspartate and glutamate metabolism
xop00260  Glycine, serine and threonine metabolism
xop00261  Monobactam biosynthesis
xop00270  Cysteine and methionine metabolism
xop00280  Valine, leucine and isoleucine degradation
xop00290  Valine, leucine and isoleucine biosynthesis
xop00300  Lysine biosynthesis
xop00310  Lysine degradation
xop00330  Arginine and proline metabolism
xop00332  Carbapenem biosynthesis
xop00340  Histidine metabolism
xop00350  Tyrosine metabolism
xop00360  Phenylalanine metabolism
xop00361  Chlorocyclohexane and chlorobenzene degradation
xop00362  Benzoate degradation
xop00364  Fluorobenzoate degradation
xop00380  Tryptophan metabolism
xop00400  Phenylalanine, tyrosine and tryptophan biosynthesis
xop00401  Novobiocin biosynthesis
xop00410  beta-Alanine metabolism
xop00430  Taurine and hypotaurine metabolism
xop00450  Selenocompound metabolism
xop00460  Cyanoamino acid metabolism
xop00470  D-Amino acid metabolism
xop00480  Glutathione metabolism
xop00500  Starch and sucrose metabolism
xop00511  Other glycan degradation
xop00520  Amino sugar and nucleotide sugar metabolism
xop00521  Streptomycin biosynthesis
xop00523  Polyketide sugar unit biosynthesis
xop00525  Acarbose and validamycin biosynthesis
xop00540  Lipopolysaccharide biosynthesis
xop00541  O-Antigen nucleotide sugar biosynthesis
xop00543  Exopolysaccharide biosynthesis
xop00550  Peptidoglycan biosynthesis
xop00552  Teichoic acid biosynthesis
xop00561  Glycerolipid metabolism
xop00562  Inositol phosphate metabolism
xop00564  Glycerophospholipid metabolism
xop00592  alpha-Linolenic acid metabolism
xop00600  Sphingolipid metabolism
xop00620  Pyruvate metabolism
xop00623  Toluene degradation
xop00625  Chloroalkane and chloroalkene degradation
xop00626  Naphthalene degradation
xop00630  Glyoxylate and dicarboxylate metabolism
xop00633  Nitrotoluene degradation
xop00640  Propanoate metabolism
xop00643  Styrene degradation
xop00650  Butanoate metabolism
xop00660  C5-Branched dibasic acid metabolism
xop00670  One carbon pool by folate
xop00680  Methane metabolism
xop00710  Carbon fixation by Calvin cycle
xop00720  Other carbon fixation pathways
xop00730  Thiamine metabolism
xop00740  Riboflavin metabolism
xop00750  Vitamin B6 metabolism
xop00760  Nicotinate and nicotinamide metabolism
xop00770  Pantothenate and CoA biosynthesis
xop00780  Biotin metabolism
xop00785  Lipoic acid metabolism
xop00790  Folate biosynthesis
xop00860  Porphyrin metabolism
xop00900  Terpenoid backbone biosynthesis
xop00907  Pinene, camphor and geraniol degradation
xop00910  Nitrogen metabolism
xop00920  Sulfur metabolism
xop00930  Caprolactam degradation
xop00946  Degradation of flavonoids
xop00996  Biosynthesis of various alkaloids
xop00999  Biosynthesis of various plant secondary metabolites
xop01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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