KEGG   PATHWAY: xoy01100
Entry
xoy01100                    Pathway                                
Name
Metabolic pathways - Xanthomonas oryzae pv. oryzae PXO86
Class
Pathway map
xoy01100  Metabolic pathways
xoy01100

Module
xoy_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xoy01100]
xoy_M00002  Glycolysis, core module involving three-carbon compounds [PATH:xoy01100]
xoy_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xoy01100]
xoy_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:xoy01100]
xoy_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xoy01100]
xoy_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xoy01100]
xoy_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xoy01100]
xoy_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:xoy01100]
xoy_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xoy01100]
xoy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xoy01100]
xoy_M00015  Proline biosynthesis, glutamate => proline [PATH:xoy01100]
xoy_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xoy01100]
xoy_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xoy01100]
xoy_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xoy01100]
xoy_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xoy01100]
xoy_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:xoy01100]
xoy_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xoy01100]
xoy_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xoy01100]
xoy_M00026  Histidine biosynthesis, PRPP => histidine [PATH:xoy01100]
xoy_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:xoy01100]
xoy_M00034  Methionine salvage pathway [PATH:xoy01100]
xoy_M00035  Methionine degradation [PATH:xoy01100]
xoy_M00044  Tyrosine degradation, tyrosine => homogentisate [PATH:xoy01100]
xoy_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xoy01100]
xoy_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xoy01100]
xoy_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xoy01100]
xoy_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xoy01100]
xoy_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xoy01100]
xoy_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xoy01100]
xoy_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xoy01100]
xoy_M00063  CMP-KDO biosynthesis [PATH:xoy01100]
xoy_M00082  Fatty acid biosynthesis, initiation [PATH:xoy01100]
xoy_M00083  Fatty acid biosynthesis, elongation [PATH:xoy01100]
xoy_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:xoy01100]
xoy_M00087  beta-Oxidation [PATH:xoy01100]
xoy_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xoy01100]
xoy_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:xoy01100]
xoy_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xoy01100]
xoy_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:xoy01100]
xoy_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xoy01100]
xoy_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xoy01100]
xoy_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:xoy01100]
xoy_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:xoy01100]
xoy_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:xoy01100]
xoy_M00149  Succinate dehydrogenase, prokaryotes [PATH:xoy01100]
xoy_M00151  Cytochrome bc1 complex respiratory unit [PATH:xoy01100]
xoy_M00155  Cytochrome c oxidase, prokaryotes [PATH:xoy01100]
xoy_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:xoy01100]
xoy_M00168  CAM (Crassulacean acid metabolism), dark [PATH:xoy01100]
xoy_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:xoy01100]
xoy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xoy01100]
xoy_M00338  Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xoy01100]
xoy_M00417  Cytochrome o ubiquinol oxidase [PATH:xoy01100]
xoy_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xoy01100]
xoy_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xoy01100]
xoy_M00552  D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xoy01100]
xoy_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xoy01100]
xoy_M00621  Glycine cleavage system [PATH:xoy01100]
xoy_M00793  dTDP-L-rhamnose biosynthesis [PATH:xoy01100]
xoy_M00845  Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xoy01100]
xoy_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xoy01100]
xoy_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xoy01100]
xoy_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xoy01100]
xoy_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xoy01100]
xoy_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xoy01100]
xoy_M00948  Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xoy01100]
xoy_M00970  Proline degradation, proline => glutamate [PATH:xoy01100]
Organism
Xanthomonas oryzae pv. oryzae PXO86 [GN:xoy]
Related
pathway
xoy00010  Glycolysis / Gluconeogenesis
xoy00020  Citrate cycle (TCA cycle)
xoy00030  Pentose phosphate pathway
xoy00040  Pentose and glucuronate interconversions
xoy00051  Fructose and mannose metabolism
xoy00052  Galactose metabolism
xoy00053  Ascorbate and aldarate metabolism
xoy00061  Fatty acid biosynthesis
xoy00071  Fatty acid degradation
xoy00074  Mycolic acid biosynthesis
xoy00130  Ubiquinone and other terpenoid-quinone biosynthesis
xoy00190  Oxidative phosphorylation
xoy00220  Arginine biosynthesis
xoy00230  Purine metabolism
xoy00240  Pyrimidine metabolism
xoy00250  Alanine, aspartate and glutamate metabolism
xoy00260  Glycine, serine and threonine metabolism
xoy00261  Monobactam biosynthesis
xoy00270  Cysteine and methionine metabolism
xoy00280  Valine, leucine and isoleucine degradation
xoy00290  Valine, leucine and isoleucine biosynthesis
xoy00300  Lysine biosynthesis
xoy00310  Lysine degradation
xoy00330  Arginine and proline metabolism
xoy00332  Carbapenem biosynthesis
xoy00340  Histidine metabolism
xoy00350  Tyrosine metabolism
xoy00360  Phenylalanine metabolism
xoy00362  Benzoate degradation
xoy00380  Tryptophan metabolism
xoy00400  Phenylalanine, tyrosine and tryptophan biosynthesis
xoy00401  Novobiocin biosynthesis
xoy00410  beta-Alanine metabolism
xoy00430  Taurine and hypotaurine metabolism
xoy00450  Selenocompound metabolism
xoy00460  Cyanoamino acid metabolism
xoy00470  D-Amino acid metabolism
xoy00480  Glutathione metabolism
xoy00500  Starch and sucrose metabolism
xoy00511  Other glycan degradation
xoy00520  Amino sugar and nucleotide sugar metabolism
xoy00521  Streptomycin biosynthesis
xoy00523  Polyketide sugar unit biosynthesis
xoy00525  Acarbose and validamycin biosynthesis
xoy00540  Lipopolysaccharide biosynthesis
xoy00541  O-Antigen nucleotide sugar biosynthesis
xoy00543  Exopolysaccharide biosynthesis
xoy00550  Peptidoglycan biosynthesis
xoy00552  Teichoic acid biosynthesis
xoy00561  Glycerolipid metabolism
xoy00562  Inositol phosphate metabolism
xoy00564  Glycerophospholipid metabolism
xoy00565  Ether lipid metabolism
xoy00592  alpha-Linolenic acid metabolism
xoy00600  Sphingolipid metabolism
xoy00620  Pyruvate metabolism
xoy00625  Chloroalkane and chloroalkene degradation
xoy00626  Naphthalene degradation
xoy00630  Glyoxylate and dicarboxylate metabolism
xoy00633  Nitrotoluene degradation
xoy00640  Propanoate metabolism
xoy00643  Styrene degradation
xoy00650  Butanoate metabolism
xoy00660  C5-Branched dibasic acid metabolism
xoy00670  One carbon pool by folate
xoy00680  Methane metabolism
xoy00710  Carbon fixation by Calvin cycle
xoy00720  Other carbon fixation pathways
xoy00730  Thiamine metabolism
xoy00740  Riboflavin metabolism
xoy00750  Vitamin B6 metabolism
xoy00760  Nicotinate and nicotinamide metabolism
xoy00770  Pantothenate and CoA biosynthesis
xoy00780  Biotin metabolism
xoy00785  Lipoic acid metabolism
xoy00790  Folate biosynthesis
xoy00860  Porphyrin metabolism
xoy00900  Terpenoid backbone biosynthesis
xoy00907  Pinene, camphor and geraniol degradation
xoy00910  Nitrogen metabolism
xoy00920  Sulfur metabolism
xoy00930  Caprolactam degradation
xoy00946  Degradation of flavonoids
xoy00996  Biosynthesis of various alkaloids
xoy00999  Biosynthesis of various plant secondary metabolites
xoy01040  Biosynthesis of unsaturated fatty acids
KO pathway
ko01100   
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