PATHWAY: xpe01100 Help Entry xpe01100                    Pathway                                 Name Metabolic pathways - Xanthomonas perforans Class BRITE hierarchy Pathway map xpe01100   Metabolic pathways Module xpe_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:xpe01100] xpe_M00002   Glycolysis, core module involving three-carbon compounds [PATH:xpe01100] xpe_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:xpe01100] xpe_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:xpe01100] xpe_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:xpe01100] xpe_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:xpe01100] xpe_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:xpe01100] xpe_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:xpe01100] xpe_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:xpe01100] xpe_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:xpe01100] xpe_M00012   Glyoxylate cycle [PATH:xpe01100] xpe_M00015   Proline biosynthesis, glutamate => proline [PATH:xpe01100] xpe_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:xpe01100] xpe_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:xpe01100] xpe_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:xpe01100] xpe_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:xpe01100] xpe_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:xpe01100] xpe_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:xpe01100] xpe_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:xpe01100] xpe_M00026   Histidine biosynthesis, PRPP => histidine [PATH:xpe01100] xpe_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:xpe01100] xpe_M00034   Methionine salvage pathway [PATH:xpe01100] xpe_M00035   Methionine degradation [PATH:xpe01100] xpe_M00036   Leucine degradation, leucine => acetoacetate + acetyl-CoA [PATH:xpe01100] xpe_M00044   Tyrosine degradation, tyrosine => homogentisate [PATH:xpe01100] xpe_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:xpe01100] xpe_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:xpe01100] xpe_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:xpe01100] xpe_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:xpe01100] xpe_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:xpe01100] xpe_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:xpe01100] xpe_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:xpe01100] xpe_M00063   CMP-KDO biosynthesis [PATH:xpe01100] xpe_M00082   Fatty acid biosynthesis, initiation [PATH:xpe01100] xpe_M00083   Fatty acid biosynthesis, elongation [PATH:xpe01100] xpe_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:xpe01100] xpe_M00087   beta-Oxidation [PATH:xpe01100] xpe_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:xpe01100] xpe_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:xpe01100] xpe_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:xpe01100] xpe_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:xpe01100] xpe_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:xpe01100] xpe_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:xpe01100] xpe_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:xpe01100] xpe_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:xpe01100] xpe_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:xpe01100] xpe_M00149   Succinate dehydrogenase, prokaryotes [PATH:xpe01100] xpe_M00151   Cytochrome bc1 complex respiratory unit [PATH:xpe01100] xpe_M00155   Cytochrome c oxidase, prokaryotes [PATH:xpe01100] xpe_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:xpe01100] xpe_M00168   CAM (Crassulacean acid metabolism), dark [PATH:xpe01100] xpe_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:xpe01100] xpe_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:xpe01100] xpe_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:xpe01100] xpe_M00417   Cytochrome o ubiquinol oxidase [PATH:xpe01100] xpe_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:xpe01100] xpe_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:xpe01100] xpe_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:xpe01100] xpe_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:xpe01100] xpe_M00555   Betaine biosynthesis, choline => betaine [PATH:xpe01100] xpe_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:xpe01100] xpe_M00621   Glycine cleavage system [PATH:xpe01100] xpe_M00793   dTDP-L-rhamnose biosynthesis [PATH:xpe01100] xpe_M00845   Arginine biosynthesis, glutamate => acetylcitrulline => arginine [PATH:xpe01100] xpe_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:xpe01100] xpe_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:xpe01100] xpe_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:xpe01100] xpe_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:xpe01100] xpe_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:xpe01100] xpe_M00948   Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate [PATH:xpe01100] xpe_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:xpe01100] xpe_M00970   Proline degradation, proline => glutamate [PATH:xpe01100] Organism Xanthomonas perforans [GN:xpe] Related pathway xpe00010   Glycolysis / Gluconeogenesis xpe00020   Citrate cycle (TCA cycle) xpe00030   Pentose phosphate pathway xpe00040   Pentose and glucuronate interconversions xpe00051   Fructose and mannose metabolism xpe00052   Galactose metabolism xpe00053   Ascorbate and aldarate metabolism xpe00061   Fatty acid biosynthesis xpe00071   Fatty acid degradation xpe00130   Ubiquinone and other terpenoid-quinone biosynthesis xpe00190   Oxidative phosphorylation xpe00220   Arginine biosynthesis xpe00230   Purine metabolism xpe00240   Pyrimidine metabolism xpe00250   Alanine, aspartate and glutamate metabolism xpe00260   Glycine, serine and threonine metabolism xpe00261   Monobactam biosynthesis xpe00270   Cysteine and methionine metabolism xpe00280   Valine, leucine and isoleucine degradation xpe00290   Valine, leucine and isoleucine biosynthesis xpe00300   Lysine biosynthesis xpe00310   Lysine degradation xpe00311   Penicillin and cephalosporin biosynthesis xpe00330   Arginine and proline metabolism xpe00332   Carbapenem biosynthesis xpe00340   Histidine metabolism xpe00350   Tyrosine metabolism xpe00360   Phenylalanine metabolism xpe00361   Chlorocyclohexane and chlorobenzene degradation xpe00362   Benzoate degradation xpe00364   Fluorobenzoate degradation xpe00380   Tryptophan metabolism xpe00400   Phenylalanine, tyrosine and tryptophan biosynthesis xpe00401   Novobiocin biosynthesis xpe00410   beta-Alanine metabolism xpe00430   Taurine and hypotaurine metabolism xpe00450   Selenocompound metabolism xpe00460   Cyanoamino acid metabolism xpe00470   D-Amino acid metabolism xpe00480   Glutathione metabolism xpe00500   Starch and sucrose metabolism xpe00511   Other glycan degradation xpe00520   Amino sugar and nucleotide sugar metabolism xpe00521   Streptomycin biosynthesis xpe00523   Polyketide sugar unit biosynthesis xpe00525   Acarbose and validamycin biosynthesis xpe00540   Lipopolysaccharide biosynthesis xpe00541   O-Antigen nucleotide sugar biosynthesis xpe00543   Exopolysaccharide biosynthesis xpe00550   Peptidoglycan biosynthesis xpe00552   Teichoic acid biosynthesis xpe00561   Glycerolipid metabolism xpe00562   Inositol phosphate metabolism xpe00564   Glycerophospholipid metabolism xpe00565   Ether lipid metabolism xpe00592   alpha-Linolenic acid metabolism xpe00600   Sphingolipid metabolism xpe00620   Pyruvate metabolism xpe00621   Dioxin degradation xpe00622   Xylene degradation xpe00623   Toluene degradation xpe00625   Chloroalkane and chloroalkene degradation xpe00626   Naphthalene degradation xpe00627   Aminobenzoate degradation xpe00630   Glyoxylate and dicarboxylate metabolism xpe00633   Nitrotoluene degradation xpe00640   Propanoate metabolism xpe00643   Styrene degradation xpe00650   Butanoate metabolism xpe00660   C5-Branched dibasic acid metabolism xpe00670   One carbon pool by folate xpe00680   Methane metabolism xpe00710   Carbon fixation by Calvin cycle xpe00720   Other carbon fixation pathways xpe00730   Thiamine metabolism xpe00740   Riboflavin metabolism xpe00750   Vitamin B6 metabolism xpe00760   Nicotinate and nicotinamide metabolism xpe00770   Pantothenate and CoA biosynthesis xpe00780   Biotin metabolism xpe00785   Lipoic acid metabolism xpe00790   Folate biosynthesis xpe00860   Porphyrin metabolism xpe00900   Terpenoid backbone biosynthesis xpe00907   Pinene, camphor and geraniol degradation xpe00910   Nitrogen metabolism xpe00920   Sulfur metabolism xpe00930   Caprolactam degradation xpe00946   Degradation of flavonoids xpe00996   Biosynthesis of various alkaloids xpe00999   Biosynthesis of various plant secondary metabolites xpe01040   Biosynthesis of unsaturated fatty acids xpe01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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