PATHWAY: yak01100 Help Entry yak01100                    Pathway                                 Name Metabolic pathways - Yersinia aleksiciae Class BRITE hierarchy Pathway map yak01100   Metabolic pathways Module yak_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:yak01100] yak_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:yak01100] yak_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:yak01100] yak_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:yak01100] yak_M00012   Glyoxylate cycle [PATH:yak01100] yak_M00015   Proline biosynthesis, glutamate => proline [PATH:yak01100] yak_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:yak01100] yak_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:yak01100] yak_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:yak01100] yak_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:yak01100] yak_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:yak01100] yak_M00021   Cysteine biosynthesis, serine => cysteine [PATH:yak01100] yak_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:yak01100] yak_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:yak01100] yak_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:yak01100] yak_M00026   Histidine biosynthesis, PRPP => histidine [PATH:yak01100] yak_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:yak01100] yak_M00034   Methionine salvage pathway [PATH:yak01100] yak_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:yak01100] yak_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yak01100] yak_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yak01100] yak_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yak01100] yak_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yak01100] yak_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yak01100] yak_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:yak01100] yak_M00082   Fatty acid biosynthesis, initiation [PATH:yak01100] yak_M00083   Fatty acid biosynthesis, elongation [PATH:yak01100] yak_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:yak01100] yak_M00087   beta-Oxidation [PATH:yak01100] yak_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:yak01100] yak_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:yak01100] yak_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:yak01100] yak_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:yak01100] yak_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:yak01100] yak_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:yak01100] yak_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:yak01100] yak_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:yak01100] yak_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:yak01100] yak_M00149   Succinate dehydrogenase, prokaryotes [PATH:yak01100] yak_M00150   Fumarate reductase, prokaryotes [PATH:yak01100] yak_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:yak01100] yak_M00168   CAM (Crassulacean acid metabolism), dark [PATH:yak01100] yak_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:yak01100] yak_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yak01100] yak_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:yak01100] yak_M00417   Cytochrome o ubiquinol oxidase [PATH:yak01100] yak_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:yak01100] yak_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:yak01100] yak_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:yak01100] yak_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:yak01100] yak_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:yak01100] yak_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:yak01100] yak_M00621   Glycine cleavage system [PATH:yak01100] yak_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:yak01100] yak_M00844   Arginine biosynthesis, ornithine => arginine [PATH:yak01100] yak_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:yak01100] yak_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:yak01100] yak_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:yak01100] yak_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:yak01100] yak_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:yak01100] yak_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:yak01100] yak_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:yak01100] yak_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:yak01100] yak_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yak01100] yak_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:yak01100] yak_M00970   Proline degradation, proline => glutamate [PATH:yak01100] Organism Yersinia aleksiciae [GN:yak] Related pathway yak00010   Glycolysis / Gluconeogenesis yak00020   Citrate cycle (TCA cycle) yak00030   Pentose phosphate pathway yak00040   Pentose and glucuronate interconversions yak00051   Fructose and mannose metabolism yak00052   Galactose metabolism yak00053   Ascorbate and aldarate metabolism yak00061   Fatty acid biosynthesis yak00071   Fatty acid degradation yak00074   Mycolic acid biosynthesis yak00130   Ubiquinone and other terpenoid-quinone biosynthesis yak00190   Oxidative phosphorylation yak00220   Arginine biosynthesis yak00230   Purine metabolism yak00240   Pyrimidine metabolism yak00250   Alanine, aspartate and glutamate metabolism yak00260   Glycine, serine and threonine metabolism yak00261   Monobactam biosynthesis yak00270   Cysteine and methionine metabolism yak00280   Valine, leucine and isoleucine degradation yak00290   Valine, leucine and isoleucine biosynthesis yak00300   Lysine biosynthesis yak00310   Lysine degradation yak00330   Arginine and proline metabolism yak00332   Carbapenem biosynthesis yak00340   Histidine metabolism yak00350   Tyrosine metabolism yak00360   Phenylalanine metabolism yak00361   Chlorocyclohexane and chlorobenzene degradation yak00362   Benzoate degradation yak00364   Fluorobenzoate degradation yak00380   Tryptophan metabolism yak00400   Phenylalanine, tyrosine and tryptophan biosynthesis yak00401   Novobiocin biosynthesis yak00410   beta-Alanine metabolism yak00430   Taurine and hypotaurine metabolism yak00440   Phosphonate and phosphinate metabolism yak00450   Selenocompound metabolism yak00460   Cyanoamino acid metabolism yak00470   D-Amino acid metabolism yak00480   Glutathione metabolism yak00500   Starch and sucrose metabolism yak00511   Other glycan degradation yak00520   Amino sugar and nucleotide sugar metabolism yak00521   Streptomycin biosynthesis yak00523   Polyketide sugar unit biosynthesis yak00525   Acarbose and validamycin biosynthesis yak00540   Lipopolysaccharide biosynthesis yak00541   O-Antigen nucleotide sugar biosynthesis yak00542   O-Antigen repeat unit biosynthesis yak00543   Exopolysaccharide biosynthesis yak00550   Peptidoglycan biosynthesis yak00552   Teichoic acid biosynthesis yak00561   Glycerolipid metabolism yak00562   Inositol phosphate metabolism yak00564   Glycerophospholipid metabolism yak00565   Ether lipid metabolism yak00592   alpha-Linolenic acid metabolism yak00600   Sphingolipid metabolism yak00620   Pyruvate metabolism yak00623   Toluene degradation yak00625   Chloroalkane and chloroalkene degradation yak00626   Naphthalene degradation yak00627   Aminobenzoate degradation yak00630   Glyoxylate and dicarboxylate metabolism yak00640   Propanoate metabolism yak00650   Butanoate metabolism yak00660   C5-Branched dibasic acid metabolism yak00670   One carbon pool by folate yak00680   Methane metabolism yak00710   Carbon fixation by Calvin cycle yak00720   Other carbon fixation pathways yak00730   Thiamine metabolism yak00740   Riboflavin metabolism yak00750   Vitamin B6 metabolism yak00760   Nicotinate and nicotinamide metabolism yak00770   Pantothenate and CoA biosynthesis yak00780   Biotin metabolism yak00785   Lipoic acid metabolism yak00790   Folate biosynthesis yak00860   Porphyrin metabolism yak00900   Terpenoid backbone biosynthesis yak00907   Pinene, camphor and geraniol degradation yak00910   Nitrogen metabolism yak00920   Sulfur metabolism yak00930   Caprolactam degradation yak00997   Biosynthesis of various other secondary metabolites yak00999   Biosynthesis of various plant secondary metabolites yak01040   Biosynthesis of unsaturated fatty acids yak01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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