PATHWAY: yan01100 Help Entry yan01100                    Pathway                                 Name Metabolic pathways - Salipiger sp. CCB-MM3 Class BRITE hierarchy Pathway map yan01100   Metabolic pathways Module yan_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:yan01100] yan_M00002   Glycolysis, core module involving three-carbon compounds [PATH:yan01100] yan_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:yan01100] yan_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:yan01100] yan_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:yan01100] yan_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:yan01100] yan_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:yan01100] yan_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:yan01100] yan_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:yan01100] yan_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:yan01100] yan_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:yan01100] yan_M00015   Proline biosynthesis, glutamate => proline [PATH:yan01100] yan_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:yan01100] yan_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:yan01100] yan_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:yan01100] yan_M00021   Cysteine biosynthesis, serine => cysteine [PATH:yan01100] yan_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:yan01100] yan_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:yan01100] yan_M00026   Histidine biosynthesis, PRPP => histidine [PATH:yan01100] yan_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:yan01100] yan_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:yan01100] yan_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:yan01100] yan_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yan01100] yan_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yan01100] yan_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yan01100] yan_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yan01100] yan_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yan01100] yan_M00082   Fatty acid biosynthesis, initiation [PATH:yan01100] yan_M00083   Fatty acid biosynthesis, elongation [PATH:yan01100] yan_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:yan01100] yan_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:yan01100] yan_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:yan01100] yan_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:yan01100] yan_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:yan01100] yan_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:yan01100] yan_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:yan01100] yan_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:yan01100] yan_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:yan01100] yan_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:yan01100] yan_M00140   C1-unit interconversion, prokaryotes [PATH:yan01100] yan_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:yan01100] yan_M00149   Succinate dehydrogenase, prokaryotes [PATH:yan01100] yan_M00151   Cytochrome bc1 complex respiratory unit [PATH:yan01100] yan_M00155   Cytochrome c oxidase, prokaryotes [PATH:yan01100] yan_M00156   Cytochrome c oxidase, cbb3-type [PATH:yan01100] yan_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:yan01100] yan_M00165   Reductive pentose phosphate cycle (Calvin cycle) [PATH:yan01100] yan_M00169   CAM (Crassulacean acid metabolism), light [PATH:yan01100] yan_M00175   Nitrogen fixation, nitrogen => ammonia [PATH:yan01100] yan_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yan01100] yan_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:yan01100] yan_M00373   Ethylmalonyl pathway [PATH:yan01100] yan_M00417   Cytochrome o ubiquinol oxidase [PATH:yan01100] yan_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:yan01100] yan_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:yan01100] yan_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:yan01100] yan_M00555   Betaine biosynthesis, choline => betaine [PATH:yan01100] yan_M00565   Trehalose biosynthesis, D-glucose 1P => trehalose [PATH:yan01100] yan_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:yan01100] yan_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:yan01100] yan_M00621   Glycine cleavage system [PATH:yan01100] yan_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:yan01100] yan_M00844   Arginine biosynthesis, ornithine => arginine [PATH:yan01100] yan_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:yan01100] yan_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:yan01100] yan_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:yan01100] yan_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:yan01100] yan_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yan01100] yan_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:yan01100] yan_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:yan01100] yan_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:yan01100] yan_M00970   Proline degradation, proline => glutamate [PATH:yan01100] Organism Salipiger sp. CCB-MM3 [GN:yan] Related pathway yan00010   Glycolysis / Gluconeogenesis yan00020   Citrate cycle (TCA cycle) yan00030   Pentose phosphate pathway yan00040   Pentose and glucuronate interconversions yan00051   Fructose and mannose metabolism yan00052   Galactose metabolism yan00053   Ascorbate and aldarate metabolism yan00061   Fatty acid biosynthesis yan00071   Fatty acid degradation yan00121   Secondary bile acid biosynthesis yan00130   Ubiquinone and other terpenoid-quinone biosynthesis yan00190   Oxidative phosphorylation yan00220   Arginine biosynthesis yan00230   Purine metabolism yan00240   Pyrimidine metabolism yan00250   Alanine, aspartate and glutamate metabolism yan00260   Glycine, serine and threonine metabolism yan00261   Monobactam biosynthesis yan00270   Cysteine and methionine metabolism yan00280   Valine, leucine and isoleucine degradation yan00290   Valine, leucine and isoleucine biosynthesis yan00300   Lysine biosynthesis yan00310   Lysine degradation yan00330   Arginine and proline metabolism yan00332   Carbapenem biosynthesis yan00340   Histidine metabolism yan00350   Tyrosine metabolism yan00360   Phenylalanine metabolism yan00361   Chlorocyclohexane and chlorobenzene degradation yan00362   Benzoate degradation yan00380   Tryptophan metabolism yan00400   Phenylalanine, tyrosine and tryptophan biosynthesis yan00401   Novobiocin biosynthesis yan00410   beta-Alanine metabolism yan00430   Taurine and hypotaurine metabolism yan00440   Phosphonate and phosphinate metabolism yan00450   Selenocompound metabolism yan00460   Cyanoamino acid metabolism yan00470   D-Amino acid metabolism yan00480   Glutathione metabolism yan00500   Starch and sucrose metabolism yan00520   Amino sugar and nucleotide sugar metabolism yan00521   Streptomycin biosynthesis yan00523   Polyketide sugar unit biosynthesis yan00540   Lipopolysaccharide biosynthesis yan00541   O-Antigen nucleotide sugar biosynthesis yan00543   Exopolysaccharide biosynthesis yan00550   Peptidoglycan biosynthesis yan00552   Teichoic acid biosynthesis yan00561   Glycerolipid metabolism yan00562   Inositol phosphate metabolism yan00564   Glycerophospholipid metabolism yan00592   alpha-Linolenic acid metabolism yan00620   Pyruvate metabolism yan00622   Xylene degradation yan00625   Chloroalkane and chloroalkene degradation yan00626   Naphthalene degradation yan00627   Aminobenzoate degradation yan00630   Glyoxylate and dicarboxylate metabolism yan00633   Nitrotoluene degradation yan00640   Propanoate metabolism yan00643   Styrene degradation yan00650   Butanoate metabolism yan00660   C5-Branched dibasic acid metabolism yan00670   One carbon pool by folate yan00680   Methane metabolism yan00710   Carbon fixation by Calvin cycle yan00720   Other carbon fixation pathways yan00730   Thiamine metabolism yan00740   Riboflavin metabolism yan00750   Vitamin B6 metabolism yan00760   Nicotinate and nicotinamide metabolism yan00770   Pantothenate and CoA biosynthesis yan00780   Biotin metabolism yan00785   Lipoic acid metabolism yan00790   Folate biosynthesis yan00860   Porphyrin metabolism yan00900   Terpenoid backbone biosynthesis yan00903   Limonene degradation yan00906   Carotenoid biosynthesis yan00907   Pinene, camphor and geraniol degradation yan00910   Nitrogen metabolism yan00920   Sulfur metabolism yan00930   Caprolactam degradation yan00946   Degradation of flavonoids yan00999   Biosynthesis of various plant secondary metabolites yan01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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