PATHWAY: yhi01100 Help Entry yhi01100                    Pathway                                 Name Metabolic pathways - Yersinia hibernica Class BRITE hierarchy Pathway map yhi01100   Metabolic pathways Module yhi_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:yhi01100] yhi_M00002   Glycolysis, core module involving three-carbon compounds [PATH:yhi01100] yhi_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:yhi01100] yhi_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:yhi01100] yhi_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:yhi01100] yhi_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:yhi01100] yhi_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:yhi01100] yhi_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:yhi01100] yhi_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:yhi01100] yhi_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:yhi01100] yhi_M00012   Glyoxylate cycle [PATH:yhi01100] yhi_M00015   Proline biosynthesis, glutamate => proline [PATH:yhi01100] yhi_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:yhi01100] yhi_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:yhi01100] yhi_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:yhi01100] yhi_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:yhi01100] yhi_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:yhi01100] yhi_M00021   Cysteine biosynthesis, serine => cysteine [PATH:yhi01100] yhi_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:yhi01100] yhi_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:yhi01100] yhi_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:yhi01100] yhi_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:yhi01100] yhi_M00026   Histidine biosynthesis, PRPP => histidine [PATH:yhi01100] yhi_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:yhi01100] yhi_M00034   Methionine salvage pathway [PATH:yhi01100] yhi_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:yhi01100] yhi_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yhi01100] yhi_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yhi01100] yhi_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yhi01100] yhi_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:yhi01100] yhi_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yhi01100] yhi_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yhi01100] yhi_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:yhi01100] yhi_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:yhi01100] yhi_M00063   CMP-KDO biosynthesis [PATH:yhi01100] yhi_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:yhi01100] yhi_M00082   Fatty acid biosynthesis, initiation [PATH:yhi01100] yhi_M00083   Fatty acid biosynthesis, elongation [PATH:yhi01100] yhi_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:yhi01100] yhi_M00087   beta-Oxidation [PATH:yhi01100] yhi_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:yhi01100] yhi_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:yhi01100] yhi_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:yhi01100] yhi_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:yhi01100] yhi_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:yhi01100] yhi_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:yhi01100] yhi_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:yhi01100] yhi_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:yhi01100] yhi_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:yhi01100] yhi_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:yhi01100] yhi_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:yhi01100] yhi_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:yhi01100] yhi_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:yhi01100] yhi_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:yhi01100] yhi_M00140   C1-unit interconversion, prokaryotes [PATH:yhi01100] yhi_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:yhi01100] yhi_M00149   Succinate dehydrogenase, prokaryotes [PATH:yhi01100] yhi_M00150   Fumarate reductase, prokaryotes [PATH:yhi01100] yhi_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:yhi01100] yhi_M00168   CAM (Crassulacean acid metabolism), dark [PATH:yhi01100] yhi_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:yhi01100] yhi_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yhi01100] yhi_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:yhi01100] yhi_M00417   Cytochrome o ubiquinol oxidase [PATH:yhi01100] yhi_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:yhi01100] yhi_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:yhi01100] yhi_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:yhi01100] yhi_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:yhi01100] yhi_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:yhi01100] yhi_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:yhi01100] yhi_M00621   Glycine cleavage system [PATH:yhi01100] yhi_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:yhi01100] yhi_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:yhi01100] yhi_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:yhi01100] yhi_M00844   Arginine biosynthesis, ornithine => arginine [PATH:yhi01100] yhi_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:yhi01100] yhi_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:yhi01100] yhi_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:yhi01100] yhi_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:yhi01100] yhi_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:yhi01100] yhi_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:yhi01100] yhi_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:yhi01100] yhi_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:yhi01100] yhi_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:yhi01100] yhi_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yhi01100] yhi_M00970   Proline degradation, proline => glutamate [PATH:yhi01100] Organism Yersinia hibernica [GN:yhi] Related pathway yhi00010   Glycolysis / Gluconeogenesis yhi00020   Citrate cycle (TCA cycle) yhi00030   Pentose phosphate pathway yhi00040   Pentose and glucuronate interconversions yhi00051   Fructose and mannose metabolism yhi00052   Galactose metabolism yhi00053   Ascorbate and aldarate metabolism yhi00061   Fatty acid biosynthesis yhi00071   Fatty acid degradation yhi00130   Ubiquinone and other terpenoid-quinone biosynthesis yhi00190   Oxidative phosphorylation yhi00220   Arginine biosynthesis yhi00230   Purine metabolism yhi00240   Pyrimidine metabolism yhi00250   Alanine, aspartate and glutamate metabolism yhi00260   Glycine, serine and threonine metabolism yhi00261   Monobactam biosynthesis yhi00270   Cysteine and methionine metabolism yhi00280   Valine, leucine and isoleucine degradation yhi00290   Valine, leucine and isoleucine biosynthesis yhi00300   Lysine biosynthesis yhi00310   Lysine degradation yhi00311   Penicillin and cephalosporin biosynthesis yhi00330   Arginine and proline metabolism yhi00332   Carbapenem biosynthesis yhi00340   Histidine metabolism yhi00350   Tyrosine metabolism yhi00360   Phenylalanine metabolism yhi00361   Chlorocyclohexane and chlorobenzene degradation yhi00362   Benzoate degradation yhi00364   Fluorobenzoate degradation yhi00380   Tryptophan metabolism yhi00400   Phenylalanine, tyrosine and tryptophan biosynthesis yhi00401   Novobiocin biosynthesis yhi00410   beta-Alanine metabolism yhi00430   Taurine and hypotaurine metabolism yhi00440   Phosphonate and phosphinate metabolism yhi00450   Selenocompound metabolism yhi00460   Cyanoamino acid metabolism yhi00470   D-Amino acid metabolism yhi00480   Glutathione metabolism yhi00500   Starch and sucrose metabolism yhi00511   Other glycan degradation yhi00520   Amino sugar and nucleotide sugar metabolism yhi00521   Streptomycin biosynthesis yhi00523   Polyketide sugar unit biosynthesis yhi00525   Acarbose and validamycin biosynthesis yhi00540   Lipopolysaccharide biosynthesis yhi00541   O-Antigen nucleotide sugar biosynthesis yhi00542   O-Antigen repeat unit biosynthesis yhi00543   Exopolysaccharide biosynthesis yhi00550   Peptidoglycan biosynthesis yhi00552   Teichoic acid biosynthesis yhi00561   Glycerolipid metabolism yhi00562   Inositol phosphate metabolism yhi00564   Glycerophospholipid metabolism yhi00565   Ether lipid metabolism yhi00592   alpha-Linolenic acid metabolism yhi00600   Sphingolipid metabolism yhi00620   Pyruvate metabolism yhi00623   Toluene degradation yhi00625   Chloroalkane and chloroalkene degradation yhi00626   Naphthalene degradation yhi00627   Aminobenzoate degradation yhi00630   Glyoxylate and dicarboxylate metabolism yhi00633   Nitrotoluene degradation yhi00640   Propanoate metabolism yhi00643   Styrene degradation yhi00650   Butanoate metabolism yhi00660   C5-Branched dibasic acid metabolism yhi00670   One carbon pool by folate yhi00680   Methane metabolism yhi00710   Carbon fixation by Calvin cycle yhi00720   Other carbon fixation pathways yhi00730   Thiamine metabolism yhi00740   Riboflavin metabolism yhi00750   Vitamin B6 metabolism yhi00760   Nicotinate and nicotinamide metabolism yhi00770   Pantothenate and CoA biosynthesis yhi00780   Biotin metabolism yhi00785   Lipoic acid metabolism yhi00790   Folate biosynthesis yhi00860   Porphyrin metabolism yhi00900   Terpenoid backbone biosynthesis yhi00907   Pinene, camphor and geraniol degradation yhi00910   Nitrogen metabolism yhi00920   Sulfur metabolism yhi00930   Caprolactam degradation yhi00999   Biosynthesis of various plant secondary metabolites yhi01040   Biosynthesis of unsaturated fatty acids yhi01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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