PATHWAY: yim01100 Help Entry yim01100                    Pathway                                 Name Metabolic pathways - Yimella sp. cx-51 Class BRITE hierarchy Pathway map yim01100   Metabolic pathways Module yim_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:yim01100] yim_M00002   Glycolysis, core module involving three-carbon compounds [PATH:yim01100] yim_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:yim01100] yim_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:yim01100] yim_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:yim01100] yim_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:yim01100] yim_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:yim01100] yim_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:yim01100] yim_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:yim01100] yim_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:yim01100] yim_M00012   Glyoxylate cycle [PATH:yim01100] yim_M00015   Proline biosynthesis, glutamate => proline [PATH:yim01100] yim_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:yim01100] yim_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:yim01100] yim_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:yim01100] yim_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:yim01100] yim_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:yim01100] yim_M00021   Cysteine biosynthesis, serine => cysteine [PATH:yim01100] yim_M00026   Histidine biosynthesis, PRPP => histidine [PATH:yim01100] yim_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:yim01100] yim_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yim01100] yim_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yim01100] yim_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yim01100] yim_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yim01100] yim_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yim01100] yim_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:yim01100] yim_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:yim01100] yim_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:yim01100] yim_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:yim01100] yim_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:yim01100] yim_M00140   C1-unit interconversion, prokaryotes [PATH:yim01100] yim_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:yim01100] yim_M00151   Cytochrome bc1 complex respiratory unit [PATH:yim01100] yim_M00155   Cytochrome c oxidase, prokaryotes [PATH:yim01100] yim_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:yim01100] yim_M00168   CAM (Crassulacean acid metabolism), dark [PATH:yim01100] yim_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yim01100] yim_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:yim01100] yim_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:yim01100] yim_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:yim01100] yim_M00555   Betaine biosynthesis, choline => betaine [PATH:yim01100] yim_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:yim01100] yim_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:yim01100] yim_M00621   Glycine cleavage system [PATH:yim01100] yim_M00844   Arginine biosynthesis, ornithine => arginine [PATH:yim01100] yim_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:yim01100] yim_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:yim01100] yim_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:yim01100] yim_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:yim01100] yim_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:yim01100] yim_M00916   Pyridoxal-P biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P [PATH:yim01100] yim_M00926   Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme [PATH:yim01100] yim_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yim01100] yim_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:yim01100] yim_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:yim01100] yim_M00970   Proline degradation, proline => glutamate [PATH:yim01100] Organism Yimella sp. cx-51 [GN:yim] Related pathway yim00010   Glycolysis / Gluconeogenesis yim00020   Citrate cycle (TCA cycle) yim00030   Pentose phosphate pathway yim00040   Pentose and glucuronate interconversions yim00051   Fructose and mannose metabolism yim00052   Galactose metabolism yim00053   Ascorbate and aldarate metabolism yim00061   Fatty acid biosynthesis yim00071   Fatty acid degradation yim00130   Ubiquinone and other terpenoid-quinone biosynthesis yim00190   Oxidative phosphorylation yim00220   Arginine biosynthesis yim00230   Purine metabolism yim00240   Pyrimidine metabolism yim00250   Alanine, aspartate and glutamate metabolism yim00260   Glycine, serine and threonine metabolism yim00261   Monobactam biosynthesis yim00270   Cysteine and methionine metabolism yim00280   Valine, leucine and isoleucine degradation yim00290   Valine, leucine and isoleucine biosynthesis yim00300   Lysine biosynthesis yim00310   Lysine degradation yim00311   Penicillin and cephalosporin biosynthesis yim00330   Arginine and proline metabolism yim00332   Carbapenem biosynthesis yim00340   Histidine metabolism yim00350   Tyrosine metabolism yim00360   Phenylalanine metabolism yim00361   Chlorocyclohexane and chlorobenzene degradation yim00362   Benzoate degradation yim00364   Fluorobenzoate degradation yim00380   Tryptophan metabolism yim00400   Phenylalanine, tyrosine and tryptophan biosynthesis yim00401   Novobiocin biosynthesis yim00410   beta-Alanine metabolism yim00430   Taurine and hypotaurine metabolism yim00450   Selenocompound metabolism yim00460   Cyanoamino acid metabolism yim00470   D-Amino acid metabolism yim00480   Glutathione metabolism yim00500   Starch and sucrose metabolism yim00514   Other types of O-glycan biosynthesis yim00515   Mannose type O-glycan biosynthesis yim00520   Amino sugar and nucleotide sugar metabolism yim00521   Streptomycin biosynthesis yim00523   Polyketide sugar unit biosynthesis yim00525   Acarbose and validamycin biosynthesis yim00541   O-Antigen nucleotide sugar biosynthesis yim00542   O-Antigen repeat unit biosynthesis yim00543   Exopolysaccharide biosynthesis yim00550   Peptidoglycan biosynthesis yim00552   Teichoic acid biosynthesis yim00561   Glycerolipid metabolism yim00562   Inositol phosphate metabolism yim00564   Glycerophospholipid metabolism yim00592   alpha-Linolenic acid metabolism yim00600   Sphingolipid metabolism yim00620   Pyruvate metabolism yim00623   Toluene degradation yim00625   Chloroalkane and chloroalkene degradation yim00627   Aminobenzoate degradation yim00630   Glyoxylate and dicarboxylate metabolism yim00640   Propanoate metabolism yim00643   Styrene degradation yim00650   Butanoate metabolism yim00660   C5-Branched dibasic acid metabolism yim00670   One carbon pool by folate yim00680   Methane metabolism yim00710   Carbon fixation by Calvin cycle yim00720   Other carbon fixation pathways yim00730   Thiamine metabolism yim00740   Riboflavin metabolism yim00750   Vitamin B6 metabolism yim00760   Nicotinate and nicotinamide metabolism yim00770   Pantothenate and CoA biosynthesis yim00780   Biotin metabolism yim00785   Lipoic acid metabolism yim00790   Folate biosynthesis yim00860   Porphyrin metabolism yim00900   Terpenoid backbone biosynthesis yim00906   Carotenoid biosynthesis yim00907   Pinene, camphor and geraniol degradation yim00910   Nitrogen metabolism yim00920   Sulfur metabolism yim00946   Degradation of flavonoids yim00999   Biosynthesis of various plant secondary metabolites yim01040   Biosynthesis of unsaturated fatty acids yim01055   Biosynthesis of vancomycin group antibiotics KO pathway ko01100     LinkDB All DBs

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