PATHWAY: yin01100 Help Entry yin01100                    Pathway                                 Name Metabolic pathways - Yersinia intermedia Class BRITE hierarchy Pathway map yin01100   Metabolic pathways Module yin_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:yin01100] yin_M00002   Glycolysis, core module involving three-carbon compounds [PATH:yin01100] yin_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:yin01100] yin_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:yin01100] yin_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:yin01100] yin_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:yin01100] yin_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:yin01100] yin_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:yin01100] yin_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:yin01100] yin_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:yin01100] yin_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:yin01100] yin_M00012   Glyoxylate cycle [PATH:yin01100] yin_M00015   Proline biosynthesis, glutamate => proline [PATH:yin01100] yin_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:yin01100] yin_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:yin01100] yin_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:yin01100] yin_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:yin01100] yin_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:yin01100] yin_M00021   Cysteine biosynthesis, serine => cysteine [PATH:yin01100] yin_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:yin01100] yin_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:yin01100] yin_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:yin01100] yin_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:yin01100] yin_M00026   Histidine biosynthesis, PRPP => histidine [PATH:yin01100] yin_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:yin01100] yin_M00034   Methionine salvage pathway [PATH:yin01100] yin_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:yin01100] yin_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:yin01100] yin_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:yin01100] yin_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:yin01100] yin_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:yin01100] yin_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:yin01100] yin_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:yin01100] yin_M00060   KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:yin01100] yin_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:yin01100] yin_M00063   CMP-KDO biosynthesis [PATH:yin01100] yin_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:yin01100] yin_M00082   Fatty acid biosynthesis, initiation [PATH:yin01100] yin_M00083   Fatty acid biosynthesis, elongation [PATH:yin01100] yin_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:yin01100] yin_M00087   beta-Oxidation [PATH:yin01100] yin_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:yin01100] yin_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:yin01100] yin_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:yin01100] yin_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:yin01100] yin_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:yin01100] yin_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:yin01100] yin_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:yin01100] yin_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:yin01100] yin_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:yin01100] yin_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:yin01100] yin_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:yin01100] yin_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:yin01100] yin_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:yin01100] yin_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:yin01100] yin_M00140   C1-unit interconversion, prokaryotes [PATH:yin01100] yin_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:yin01100] yin_M00149   Succinate dehydrogenase, prokaryotes [PATH:yin01100] yin_M00150   Fumarate reductase, prokaryotes [PATH:yin01100] yin_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:yin01100] yin_M00168   CAM (Crassulacean acid metabolism), dark [PATH:yin01100] yin_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:yin01100] yin_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:yin01100] yin_M00338   Cysteine biosynthesis, homocysteine + serine => cysteine [PATH:yin01100] yin_M00417   Cytochrome o ubiquinol oxidase [PATH:yin01100] yin_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:yin01100] yin_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:yin01100] yin_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:yin01100] yin_M00552   D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P [PATH:yin01100] yin_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:yin01100] yin_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:yin01100] yin_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:yin01100] yin_M00621   Glycine cleavage system [PATH:yin01100] yin_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:yin01100] yin_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:yin01100] yin_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:yin01100] yin_M00844   Arginine biosynthesis, ornithine => arginine [PATH:yin01100] yin_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:yin01100] yin_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:yin01100] yin_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:yin01100] yin_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:yin01100] yin_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:yin01100] yin_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:yin01100] yin_M00899   Thiamine salvage pathway, HMP/HET => TMP [PATH:yin01100] yin_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:yin01100] yin_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:yin01100] yin_M00924   Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide [PATH:yin01100] yin_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:yin01100] yin_M00970   Proline degradation, proline => glutamate [PATH:yin01100] Organism Yersinia intermedia [GN:yin] Related pathway yin00010   Glycolysis / Gluconeogenesis yin00020   Citrate cycle (TCA cycle) yin00030   Pentose phosphate pathway yin00040   Pentose and glucuronate interconversions yin00051   Fructose and mannose metabolism yin00052   Galactose metabolism yin00053   Ascorbate and aldarate metabolism yin00061   Fatty acid biosynthesis yin00071   Fatty acid degradation yin00130   Ubiquinone and other terpenoid-quinone biosynthesis yin00190   Oxidative phosphorylation yin00220   Arginine biosynthesis yin00230   Purine metabolism yin00240   Pyrimidine metabolism yin00250   Alanine, aspartate and glutamate metabolism yin00260   Glycine, serine and threonine metabolism yin00261   Monobactam biosynthesis yin00270   Cysteine and methionine metabolism yin00280   Valine, leucine and isoleucine degradation yin00290   Valine, leucine and isoleucine biosynthesis yin00300   Lysine biosynthesis yin00310   Lysine degradation yin00330   Arginine and proline metabolism yin00332   Carbapenem biosynthesis yin00340   Histidine metabolism yin00350   Tyrosine metabolism yin00360   Phenylalanine metabolism yin00361   Chlorocyclohexane and chlorobenzene degradation yin00362   Benzoate degradation yin00364   Fluorobenzoate degradation yin00380   Tryptophan metabolism yin00400   Phenylalanine, tyrosine and tryptophan biosynthesis yin00401   Novobiocin biosynthesis yin00410   beta-Alanine metabolism yin00430   Taurine and hypotaurine metabolism yin00440   Phosphonate and phosphinate metabolism yin00450   Selenocompound metabolism yin00460   Cyanoamino acid metabolism yin00470   D-Amino acid metabolism yin00480   Glutathione metabolism yin00500   Starch and sucrose metabolism yin00511   Other glycan degradation yin00520   Amino sugar and nucleotide sugar metabolism yin00521   Streptomycin biosynthesis yin00523   Polyketide sugar unit biosynthesis yin00525   Acarbose and validamycin biosynthesis yin00540   Lipopolysaccharide biosynthesis yin00541   O-Antigen nucleotide sugar biosynthesis yin00542   O-Antigen repeat unit biosynthesis yin00543   Exopolysaccharide biosynthesis yin00550   Peptidoglycan biosynthesis yin00552   Teichoic acid biosynthesis yin00561   Glycerolipid metabolism yin00562   Inositol phosphate metabolism yin00564   Glycerophospholipid metabolism yin00565   Ether lipid metabolism yin00592   alpha-Linolenic acid metabolism yin00600   Sphingolipid metabolism yin00620   Pyruvate metabolism yin00623   Toluene degradation yin00625   Chloroalkane and chloroalkene degradation yin00626   Naphthalene degradation yin00627   Aminobenzoate degradation yin00630   Glyoxylate and dicarboxylate metabolism yin00633   Nitrotoluene degradation yin00640   Propanoate metabolism yin00643   Styrene degradation yin00650   Butanoate metabolism yin00660   C5-Branched dibasic acid metabolism yin00670   One carbon pool by folate yin00680   Methane metabolism yin00710   Carbon fixation by Calvin cycle yin00720   Other carbon fixation pathways yin00730   Thiamine metabolism yin00740   Riboflavin metabolism yin00750   Vitamin B6 metabolism yin00760   Nicotinate and nicotinamide metabolism yin00770   Pantothenate and CoA biosynthesis yin00780   Biotin metabolism yin00785   Lipoic acid metabolism yin00790   Folate biosynthesis yin00860   Porphyrin metabolism yin00900   Terpenoid backbone biosynthesis yin00907   Pinene, camphor and geraniol degradation yin00910   Nitrogen metabolism yin00920   Sulfur metabolism yin00930   Caprolactam degradation yin00997   Biosynthesis of various other secondary metabolites yin00999   Biosynthesis of various plant secondary metabolites yin01040   Biosynthesis of unsaturated fatty acids yin01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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