PATHWAY: ypac01100 Help Entry ypac01100                   Pathway                                 Name Metabolic pathways - Alloyangia pacifica Class BRITE hierarchy Pathway map ypac01100   Metabolic pathways Module ypac_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypac01100] ypac_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ypac01100] ypac_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypac01100] ypac_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypac01100] ypac_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ypac01100] ypac_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypac01100] ypac_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypac01100] ypac_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypac01100] ypac_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypac01100] ypac_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypac01100] ypac_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypac01100] ypac_M00015   Proline biosynthesis, glutamate => proline [PATH:ypac01100] ypac_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypac01100] ypac_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypac01100] ypac_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ypac01100] ypac_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ypac01100] ypac_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypac01100] ypac_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ypac01100] ypac_M00033   Ectoine biosynthesis, aspartate => ectoine [PATH:ypac01100] ypac_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypac01100] ypac_M00046   Pyrimidine degradation, uracil => beta-alanine, thymine => 3-aminoisobutanoate [PATH:ypac01100] ypac_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypac01100] ypac_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypac01100] ypac_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypac01100] ypac_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypac01100] ypac_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypac01100] ypac_M00082   Fatty acid biosynthesis, initiation [PATH:ypac01100] ypac_M00083   Fatty acid biosynthesis, elongation [PATH:ypac01100] ypac_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ypac01100] ypac_M00087   beta-Oxidation [PATH:ypac01100] ypac_M00091   Phosphatidylcholine (PC) biosynthesis, PE => PC [PATH:ypac01100] ypac_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypac01100] ypac_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway [PATH:ypac01100] ypac_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypac01100] ypac_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ypac01100] ypac_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypac01100] ypac_M00122   Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin [PATH:ypac01100] ypac_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypac01100] ypac_M00134   Polyamine biosynthesis, arginine => ornithine => putrescine [PATH:ypac01100] ypac_M00140   C1-unit interconversion, prokaryotes [PATH:ypac01100] ypac_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ypac01100] ypac_M00149   Succinate dehydrogenase, prokaryotes [PATH:ypac01100] ypac_M00151   Cytochrome bc1 complex respiratory unit [PATH:ypac01100] ypac_M00155   Cytochrome c oxidase, prokaryotes [PATH:ypac01100] ypac_M00156   Cytochrome c oxidase, cbb3-type [PATH:ypac01100] ypac_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ypac01100] ypac_M00169   CAM (Crassulacean acid metabolism), light [PATH:ypac01100] ypac_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypac01100] ypac_M00364   C10-C20 isoprenoid biosynthesis, bacteria [PATH:ypac01100] ypac_M00373   Ethylmalonyl pathway [PATH:ypac01100] ypac_M00417   Cytochrome o ubiquinol oxidase [PATH:ypac01100] ypac_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypac01100] ypac_M00531   Assimilatory nitrate reduction, nitrate => ammonia [PATH:ypac01100] ypac_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypac01100] ypac_M00555   Betaine biosynthesis, choline => betaine [PATH:ypac01100] ypac_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypac01100] ypac_M00595   Thiosulfate oxidation by SOX complex, thiosulfate => sulfate [PATH:ypac01100] ypac_M00621   Glycine cleavage system [PATH:ypac01100] ypac_M00741   Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA [PATH:ypac01100] ypac_M00793   dTDP-L-rhamnose biosynthesis [PATH:ypac01100] ypac_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ypac01100] ypac_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypac01100] ypac_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypac01100] ypac_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypac01100] ypac_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypac01100] ypac_M00925   Cobalamin biosynthesis, aerobic, uroporphyrinogen III => precorrin 2 => cobyrinate a,c-diamide [PATH:ypac01100] ypac_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypac01100] ypac_M00939   Pyrimidine degradation, uracil => 3-hydroxypropanoate [PATH:ypac01100] ypac_M00958   Adenine ribonucleotide degradation, AMP => Urate [PATH:ypac01100] ypac_M00959   Guanine ribonucleotide degradation, GMP => Urate [PATH:ypac01100] ypac_M00970   Proline degradation, proline => glutamate [PATH:ypac01100] Organism Alloyangia pacifica [GN:ypac] Related pathway ypac00010   Glycolysis / Gluconeogenesis ypac00020   Citrate cycle (TCA cycle) ypac00030   Pentose phosphate pathway ypac00040   Pentose and glucuronate interconversions ypac00051   Fructose and mannose metabolism ypac00052   Galactose metabolism ypac00053   Ascorbate and aldarate metabolism ypac00061   Fatty acid biosynthesis ypac00071   Fatty acid degradation ypac00121   Secondary bile acid biosynthesis ypac00130   Ubiquinone and other terpenoid-quinone biosynthesis ypac00190   Oxidative phosphorylation ypac00220   Arginine biosynthesis ypac00230   Purine metabolism ypac00240   Pyrimidine metabolism ypac00250   Alanine, aspartate and glutamate metabolism ypac00260   Glycine, serine and threonine metabolism ypac00261   Monobactam biosynthesis ypac00270   Cysteine and methionine metabolism ypac00280   Valine, leucine and isoleucine degradation ypac00290   Valine, leucine and isoleucine biosynthesis ypac00300   Lysine biosynthesis ypac00310   Lysine degradation ypac00311   Penicillin and cephalosporin biosynthesis ypac00330   Arginine and proline metabolism ypac00332   Carbapenem biosynthesis ypac00340   Histidine metabolism ypac00350   Tyrosine metabolism ypac00360   Phenylalanine metabolism ypac00361   Chlorocyclohexane and chlorobenzene degradation ypac00362   Benzoate degradation ypac00380   Tryptophan metabolism ypac00400   Phenylalanine, tyrosine and tryptophan biosynthesis ypac00401   Novobiocin biosynthesis ypac00410   beta-Alanine metabolism ypac00430   Taurine and hypotaurine metabolism ypac00440   Phosphonate and phosphinate metabolism ypac00450   Selenocompound metabolism ypac00460   Cyanoamino acid metabolism ypac00470   D-Amino acid metabolism ypac00480   Glutathione metabolism ypac00500   Starch and sucrose metabolism ypac00520   Amino sugar and nucleotide sugar metabolism ypac00521   Streptomycin biosynthesis ypac00523   Polyketide sugar unit biosynthesis ypac00525   Acarbose and validamycin biosynthesis ypac00540   Lipopolysaccharide biosynthesis ypac00541   O-Antigen nucleotide sugar biosynthesis ypac00543   Exopolysaccharide biosynthesis ypac00550   Peptidoglycan biosynthesis ypac00552   Teichoic acid biosynthesis ypac00561   Glycerolipid metabolism ypac00562   Inositol phosphate metabolism ypac00564   Glycerophospholipid metabolism ypac00592   alpha-Linolenic acid metabolism ypac00620   Pyruvate metabolism ypac00622   Xylene degradation ypac00623   Toluene degradation ypac00625   Chloroalkane and chloroalkene degradation ypac00626   Naphthalene degradation ypac00627   Aminobenzoate degradation ypac00630   Glyoxylate and dicarboxylate metabolism ypac00633   Nitrotoluene degradation ypac00640   Propanoate metabolism ypac00643   Styrene degradation ypac00650   Butanoate metabolism ypac00660   C5-Branched dibasic acid metabolism ypac00670   One carbon pool by folate ypac00680   Methane metabolism ypac00710   Carbon fixation by Calvin cycle ypac00720   Other carbon fixation pathways ypac00730   Thiamine metabolism ypac00740   Riboflavin metabolism ypac00750   Vitamin B6 metabolism ypac00760   Nicotinate and nicotinamide metabolism ypac00770   Pantothenate and CoA biosynthesis ypac00780   Biotin metabolism ypac00785   Lipoic acid metabolism ypac00790   Folate biosynthesis ypac00860   Porphyrin metabolism ypac00900   Terpenoid backbone biosynthesis ypac00903   Limonene degradation ypac00906   Carotenoid biosynthesis ypac00907   Pinene, camphor and geraniol degradation ypac00910   Nitrogen metabolism ypac00920   Sulfur metabolism ypac00930   Caprolactam degradation ypac00946   Degradation of flavonoids ypac00999   Biosynthesis of various plant secondary metabolites ypac01040   Biosynthesis of unsaturated fatty acids ypac01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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