KEGG   PATHWAY: ypb01100
Entry
ypb01100                    Pathway                                
Name
Metabolic pathways - Yersinia pseudotuberculosis PB1/+ (serotype 1B)
Class
Pathway map
ypb01100  Metabolic pathways
ypb01100

Module
ypb_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypb01100]
ypb_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypb01100]
ypb_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypb01100]
ypb_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypb01100]
ypb_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypb01100]
ypb_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypb01100]
ypb_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypb01100]
ypb_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypb01100]
ypb_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypb01100]
ypb_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypb01100]
ypb_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypb01100]
ypb_M00012  Glyoxylate cycle [PATH:ypb01100]
ypb_M00015  Proline biosynthesis, glutamate => proline [PATH:ypb01100]
ypb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypb01100]
ypb_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypb01100]
ypb_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypb01100]
ypb_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypb01100]
ypb_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypb01100]
ypb_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypb01100]
ypb_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypb01100]
ypb_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypb01100]
ypb_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypb01100]
ypb_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypb01100]
ypb_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypb01100]
ypb_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypb01100]
ypb_M00034  Methionine salvage pathway [PATH:ypb01100]
ypb_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypb01100]
ypb_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypb01100]
ypb_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypb01100]
ypb_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypb01100]
ypb_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypb01100]
ypb_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypb01100]
ypb_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypb01100]
ypb_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ypb01100]
ypb_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypb01100]
ypb_M00063  CMP-KDO biosynthesis [PATH:ypb01100]
ypb_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypb01100]
ypb_M00082  Fatty acid biosynthesis, initiation [PATH:ypb01100]
ypb_M00083  Fatty acid biosynthesis, elongation [PATH:ypb01100]
ypb_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypb01100]
ypb_M00087  beta-Oxidation [PATH:ypb01100]
ypb_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypb01100]
ypb_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypb01100]
ypb_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypb01100]
ypb_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypb01100]
ypb_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypb01100]
ypb_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypb01100]
ypb_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypb01100]
ypb_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypb01100]
ypb_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypb01100]
ypb_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypb01100]
ypb_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypb01100]
ypb_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypb01100]
ypb_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypb01100]
ypb_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypb01100]
ypb_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypb01100]
ypb_M00150  Fumarate reductase, prokaryotes [PATH:ypb01100]
ypb_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypb01100]
ypb_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypb01100]
ypb_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypb01100]
ypb_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypb01100]
ypb_M00417  Cytochrome o ubiquinol oxidase [PATH:ypb01100]
ypb_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypb01100]
ypb_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypb01100]
ypb_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypb01100]
ypb_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypb01100]
ypb_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypb01100]
ypb_M00555  Betaine biosynthesis, choline => betaine [PATH:ypb01100]
ypb_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypb01100]
ypb_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypb01100]
ypb_M00621  Glycine cleavage system [PATH:ypb01100]
ypb_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypb01100]
ypb_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypb01100]
ypb_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypb01100]
ypb_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypb01100]
ypb_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypb01100]
ypb_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypb01100]
ypb_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypb01100]
ypb_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypb01100]
ypb_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypb01100]
ypb_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypb01100]
ypb_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypb01100]
ypb_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypb01100]
ypb_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypb01100]
ypb_M00970  Proline degradation, proline => glutamate [PATH:ypb01100]
Organism
Yersinia pseudotuberculosis PB1/+ (serotype 1B) [GN:ypb]
Related
pathway
ypb00010  Glycolysis / Gluconeogenesis
ypb00020  Citrate cycle (TCA cycle)
ypb00030  Pentose phosphate pathway
ypb00040  Pentose and glucuronate interconversions
ypb00051  Fructose and mannose metabolism
ypb00052  Galactose metabolism
ypb00053  Ascorbate and aldarate metabolism
ypb00061  Fatty acid biosynthesis
ypb00071  Fatty acid degradation
ypb00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypb00190  Oxidative phosphorylation
ypb00220  Arginine biosynthesis
ypb00230  Purine metabolism
ypb00240  Pyrimidine metabolism
ypb00250  Alanine, aspartate and glutamate metabolism
ypb00260  Glycine, serine and threonine metabolism
ypb00261  Monobactam biosynthesis
ypb00270  Cysteine and methionine metabolism
ypb00280  Valine, leucine and isoleucine degradation
ypb00290  Valine, leucine and isoleucine biosynthesis
ypb00300  Lysine biosynthesis
ypb00310  Lysine degradation
ypb00330  Arginine and proline metabolism
ypb00332  Carbapenem biosynthesis
ypb00340  Histidine metabolism
ypb00350  Tyrosine metabolism
ypb00360  Phenylalanine metabolism
ypb00361  Chlorocyclohexane and chlorobenzene degradation
ypb00362  Benzoate degradation
ypb00364  Fluorobenzoate degradation
ypb00380  Tryptophan metabolism
ypb00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypb00401  Novobiocin biosynthesis
ypb00410  beta-Alanine metabolism
ypb00430  Taurine and hypotaurine metabolism
ypb00440  Phosphonate and phosphinate metabolism
ypb00450  Selenocompound metabolism
ypb00460  Cyanoamino acid metabolism
ypb00470  D-Amino acid metabolism
ypb00480  Glutathione metabolism
ypb00500  Starch and sucrose metabolism
ypb00511  Other glycan degradation
ypb00520  Amino sugar and nucleotide sugar metabolism
ypb00521  Streptomycin biosynthesis
ypb00523  Polyketide sugar unit biosynthesis
ypb00525  Acarbose and validamycin biosynthesis
ypb00540  Lipopolysaccharide biosynthesis
ypb00541  O-Antigen nucleotide sugar biosynthesis
ypb00542  O-Antigen repeat unit biosynthesis
ypb00543  Exopolysaccharide biosynthesis
ypb00550  Peptidoglycan biosynthesis
ypb00552  Teichoic acid biosynthesis
ypb00561  Glycerolipid metabolism
ypb00562  Inositol phosphate metabolism
ypb00564  Glycerophospholipid metabolism
ypb00565  Ether lipid metabolism
ypb00592  alpha-Linolenic acid metabolism
ypb00600  Sphingolipid metabolism
ypb00620  Pyruvate metabolism
ypb00623  Toluene degradation
ypb00625  Chloroalkane and chloroalkene degradation
ypb00626  Naphthalene degradation
ypb00627  Aminobenzoate degradation
ypb00630  Glyoxylate and dicarboxylate metabolism
ypb00633  Nitrotoluene degradation
ypb00640  Propanoate metabolism
ypb00650  Butanoate metabolism
ypb00660  C5-Branched dibasic acid metabolism
ypb00670  One carbon pool by folate
ypb00680  Methane metabolism
ypb00710  Carbon fixation by Calvin cycle
ypb00720  Other carbon fixation pathways
ypb00730  Thiamine metabolism
ypb00740  Riboflavin metabolism
ypb00750  Vitamin B6 metabolism
ypb00760  Nicotinate and nicotinamide metabolism
ypb00770  Pantothenate and CoA biosynthesis
ypb00780  Biotin metabolism
ypb00785  Lipoic acid metabolism
ypb00790  Folate biosynthesis
ypb00860  Porphyrin metabolism
ypb00900  Terpenoid backbone biosynthesis
ypb00907  Pinene, camphor and geraniol degradation
ypb00910  Nitrogen metabolism
ypb00920  Sulfur metabolism
ypb00930  Caprolactam degradation
ypb00946  Degradation of flavonoids
ypb00997  Biosynthesis of various other secondary metabolites
ypb00999  Biosynthesis of various plant secondary metabolites
ypb01040  Biosynthesis of unsaturated fatty acids
ypb01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

DBGET integrated database retrieval system