KEGG   PATHWAY: ypc01100
Entry
ypc01100                    Pathway                                
Name
Metabolic pathways - Yersinia pseudotuberculosis 1
Class
Pathway map
ypc01100  Metabolic pathways
ypc01100

Module
ypc_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypc01100]
ypc_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypc01100]
ypc_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypc01100]
ypc_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypc01100]
ypc_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypc01100]
ypc_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypc01100]
ypc_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypc01100]
ypc_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypc01100]
ypc_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypc01100]
ypc_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypc01100]
ypc_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypc01100]
ypc_M00012  Glyoxylate cycle [PATH:ypc01100]
ypc_M00015  Proline biosynthesis, glutamate => proline [PATH:ypc01100]
ypc_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypc01100]
ypc_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypc01100]
ypc_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypc01100]
ypc_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypc01100]
ypc_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypc01100]
ypc_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypc01100]
ypc_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypc01100]
ypc_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypc01100]
ypc_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypc01100]
ypc_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypc01100]
ypc_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypc01100]
ypc_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypc01100]
ypc_M00034  Methionine salvage pathway [PATH:ypc01100]
ypc_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypc01100]
ypc_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypc01100]
ypc_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypc01100]
ypc_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypc01100]
ypc_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypc01100]
ypc_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypc01100]
ypc_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypc01100]
ypc_M00060  KDO2-lipid A biosynthesis, Raetz pathway, LpxL-LpxM type [PATH:ypc01100]
ypc_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypc01100]
ypc_M00063  CMP-KDO biosynthesis [PATH:ypc01100]
ypc_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypc01100]
ypc_M00082  Fatty acid biosynthesis, initiation [PATH:ypc01100]
ypc_M00083  Fatty acid biosynthesis, elongation [PATH:ypc01100]
ypc_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypc01100]
ypc_M00087  beta-Oxidation [PATH:ypc01100]
ypc_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypc01100]
ypc_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypc01100]
ypc_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypc01100]
ypc_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypc01100]
ypc_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypc01100]
ypc_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypc01100]
ypc_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypc01100]
ypc_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypc01100]
ypc_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypc01100]
ypc_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypc01100]
ypc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypc01100]
ypc_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypc01100]
ypc_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypc01100]
ypc_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypc01100]
ypc_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypc01100]
ypc_M00150  Fumarate reductase, prokaryotes [PATH:ypc01100]
ypc_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypc01100]
ypc_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypc01100]
ypc_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypc01100]
ypc_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypc01100]
ypc_M00417  Cytochrome o ubiquinol oxidase [PATH:ypc01100]
ypc_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypc01100]
ypc_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypc01100]
ypc_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypc01100]
ypc_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypc01100]
ypc_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypc01100]
ypc_M00555  Betaine biosynthesis, choline => betaine [PATH:ypc01100]
ypc_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypc01100]
ypc_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypc01100]
ypc_M00621  Glycine cleavage system [PATH:ypc01100]
ypc_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypc01100]
ypc_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypc01100]
ypc_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypc01100]
ypc_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypc01100]
ypc_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypc01100]
ypc_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypc01100]
ypc_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypc01100]
ypc_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypc01100]
ypc_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypc01100]
ypc_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypc01100]
ypc_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypc01100]
ypc_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypc01100]
ypc_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypc01100]
ypc_M00970  Proline degradation, proline => glutamate [PATH:ypc01100]
Organism
Yersinia pseudotuberculosis 1 [GN:ypc]
Related
pathway
ypc00010  Glycolysis / Gluconeogenesis
ypc00020  Citrate cycle (TCA cycle)
ypc00030  Pentose phosphate pathway
ypc00040  Pentose and glucuronate interconversions
ypc00051  Fructose and mannose metabolism
ypc00052  Galactose metabolism
ypc00053  Ascorbate and aldarate metabolism
ypc00061  Fatty acid biosynthesis
ypc00071  Fatty acid degradation
ypc00074  Mycolic acid biosynthesis
ypc00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypc00190  Oxidative phosphorylation
ypc00220  Arginine biosynthesis
ypc00230  Purine metabolism
ypc00240  Pyrimidine metabolism
ypc00250  Alanine, aspartate and glutamate metabolism
ypc00260  Glycine, serine and threonine metabolism
ypc00261  Monobactam biosynthesis
ypc00270  Cysteine and methionine metabolism
ypc00280  Valine, leucine and isoleucine degradation
ypc00290  Valine, leucine and isoleucine biosynthesis
ypc00300  Lysine biosynthesis
ypc00310  Lysine degradation
ypc00330  Arginine and proline metabolism
ypc00332  Carbapenem biosynthesis
ypc00340  Histidine metabolism
ypc00350  Tyrosine metabolism
ypc00360  Phenylalanine metabolism
ypc00361  Chlorocyclohexane and chlorobenzene degradation
ypc00362  Benzoate degradation
ypc00364  Fluorobenzoate degradation
ypc00380  Tryptophan metabolism
ypc00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypc00401  Novobiocin biosynthesis
ypc00410  beta-Alanine metabolism
ypc00430  Taurine and hypotaurine metabolism
ypc00440  Phosphonate and phosphinate metabolism
ypc00450  Selenocompound metabolism
ypc00460  Cyanoamino acid metabolism
ypc00470  D-Amino acid metabolism
ypc00480  Glutathione metabolism
ypc00500  Starch and sucrose metabolism
ypc00511  Other glycan degradation
ypc00520  Amino sugar and nucleotide sugar metabolism
ypc00521  Streptomycin biosynthesis
ypc00523  Polyketide sugar unit biosynthesis
ypc00525  Acarbose and validamycin biosynthesis
ypc00540  Lipopolysaccharide biosynthesis
ypc00541  O-Antigen nucleotide sugar biosynthesis
ypc00542  O-Antigen repeat unit biosynthesis
ypc00543  Exopolysaccharide biosynthesis
ypc00550  Peptidoglycan biosynthesis
ypc00552  Teichoic acid biosynthesis
ypc00561  Glycerolipid metabolism
ypc00562  Inositol phosphate metabolism
ypc00564  Glycerophospholipid metabolism
ypc00565  Ether lipid metabolism
ypc00592  alpha-Linolenic acid metabolism
ypc00600  Sphingolipid metabolism
ypc00620  Pyruvate metabolism
ypc00623  Toluene degradation
ypc00625  Chloroalkane and chloroalkene degradation
ypc00626  Naphthalene degradation
ypc00627  Aminobenzoate degradation
ypc00630  Glyoxylate and dicarboxylate metabolism
ypc00633  Nitrotoluene degradation
ypc00640  Propanoate metabolism
ypc00650  Butanoate metabolism
ypc00660  C5-Branched dibasic acid metabolism
ypc00670  One carbon pool by folate
ypc00680  Methane metabolism
ypc00710  Carbon fixation by Calvin cycle
ypc00720  Other carbon fixation pathways
ypc00730  Thiamine metabolism
ypc00740  Riboflavin metabolism
ypc00750  Vitamin B6 metabolism
ypc00760  Nicotinate and nicotinamide metabolism
ypc00770  Pantothenate and CoA biosynthesis
ypc00780  Biotin metabolism
ypc00785  Lipoic acid metabolism
ypc00790  Folate biosynthesis
ypc00860  Porphyrin metabolism
ypc00900  Terpenoid backbone biosynthesis
ypc00907  Pinene, camphor and geraniol degradation
ypc00910  Nitrogen metabolism
ypc00920  Sulfur metabolism
ypc00930  Caprolactam degradation
ypc00946  Degradation of flavonoids
ypc00997  Biosynthesis of various other secondary metabolites
ypc00999  Biosynthesis of various plant secondary metabolites
ypc01040  Biosynthesis of unsaturated fatty acids
ypc01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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