KEGG   PATHWAY: ypl01100
Entry
ypl01100                    Pathway                                
Name
Metabolic pathways - Yersinia pestis El Dorado
Class
Pathway map
ypl01100  Metabolic pathways
ypl01100

Module
ypl_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypl01100]
ypl_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypl01100]
ypl_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypl01100]
ypl_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypl01100]
ypl_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypl01100]
ypl_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypl01100]
ypl_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypl01100]
ypl_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypl01100]
ypl_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypl01100]
ypl_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypl01100]
ypl_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypl01100]
ypl_M00012  Glyoxylate cycle [PATH:ypl01100]
ypl_M00015  Proline biosynthesis, glutamate => proline [PATH:ypl01100]
ypl_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypl01100]
ypl_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypl01100]
ypl_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypl01100]
ypl_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypl01100]
ypl_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypl01100]
ypl_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypl01100]
ypl_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypl01100]
ypl_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypl01100]
ypl_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypl01100]
ypl_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypl01100]
ypl_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypl01100]
ypl_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypl01100]
ypl_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypl01100]
ypl_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypl01100]
ypl_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypl01100]
ypl_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypl01100]
ypl_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypl01100]
ypl_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypl01100]
ypl_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypl01100]
ypl_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypl01100]
ypl_M00063  CMP-KDO biosynthesis [PATH:ypl01100]
ypl_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypl01100]
ypl_M00082  Fatty acid biosynthesis, initiation [PATH:ypl01100]
ypl_M00083  Fatty acid biosynthesis, elongation [PATH:ypl01100]
ypl_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypl01100]
ypl_M00087  beta-Oxidation [PATH:ypl01100]
ypl_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypl01100]
ypl_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypl01100]
ypl_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypl01100]
ypl_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypl01100]
ypl_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypl01100]
ypl_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypl01100]
ypl_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypl01100]
ypl_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypl01100]
ypl_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypl01100]
ypl_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypl01100]
ypl_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypl01100]
ypl_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypl01100]
ypl_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypl01100]
ypl_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypl01100]
ypl_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypl01100]
ypl_M00150  Fumarate reductase, prokaryotes [PATH:ypl01100]
ypl_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypl01100]
ypl_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypl01100]
ypl_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypl01100]
ypl_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypl01100]
ypl_M00417  Cytochrome o ubiquinol oxidase [PATH:ypl01100]
ypl_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypl01100]
ypl_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypl01100]
ypl_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypl01100]
ypl_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypl01100]
ypl_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypl01100]
ypl_M00555  Betaine biosynthesis, choline => betaine [PATH:ypl01100]
ypl_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypl01100]
ypl_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypl01100]
ypl_M00621  Glycine cleavage system [PATH:ypl01100]
ypl_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypl01100]
ypl_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypl01100]
ypl_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypl01100]
ypl_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypl01100]
ypl_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypl01100]
ypl_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypl01100]
ypl_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypl01100]
ypl_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypl01100]
ypl_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypl01100]
ypl_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypl01100]
ypl_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypl01100]
ypl_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypl01100]
ypl_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypl01100]
ypl_M00970  Proline degradation, proline => glutamate [PATH:ypl01100]
Organism
Yersinia pestis El Dorado [GN:ypl]
Related
pathway
ypl00010  Glycolysis / Gluconeogenesis
ypl00020  Citrate cycle (TCA cycle)
ypl00030  Pentose phosphate pathway
ypl00040  Pentose and glucuronate interconversions
ypl00051  Fructose and mannose metabolism
ypl00052  Galactose metabolism
ypl00053  Ascorbate and aldarate metabolism
ypl00061  Fatty acid biosynthesis
ypl00071  Fatty acid degradation
ypl00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypl00190  Oxidative phosphorylation
ypl00220  Arginine biosynthesis
ypl00230  Purine metabolism
ypl00240  Pyrimidine metabolism
ypl00250  Alanine, aspartate and glutamate metabolism
ypl00260  Glycine, serine and threonine metabolism
ypl00261  Monobactam biosynthesis
ypl00270  Cysteine and methionine metabolism
ypl00280  Valine, leucine and isoleucine degradation
ypl00290  Valine, leucine and isoleucine biosynthesis
ypl00300  Lysine biosynthesis
ypl00310  Lysine degradation
ypl00330  Arginine and proline metabolism
ypl00332  Carbapenem biosynthesis
ypl00340  Histidine metabolism
ypl00350  Tyrosine metabolism
ypl00360  Phenylalanine metabolism
ypl00361  Chlorocyclohexane and chlorobenzene degradation
ypl00362  Benzoate degradation
ypl00364  Fluorobenzoate degradation
ypl00380  Tryptophan metabolism
ypl00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypl00401  Novobiocin biosynthesis
ypl00410  beta-Alanine metabolism
ypl00430  Taurine and hypotaurine metabolism
ypl00440  Phosphonate and phosphinate metabolism
ypl00450  Selenocompound metabolism
ypl00460  Cyanoamino acid metabolism
ypl00470  D-Amino acid metabolism
ypl00480  Glutathione metabolism
ypl00500  Starch and sucrose metabolism
ypl00511  Other glycan degradation
ypl00520  Amino sugar and nucleotide sugar metabolism
ypl00521  Streptomycin biosynthesis
ypl00523  Polyketide sugar unit biosynthesis
ypl00525  Acarbose and validamycin biosynthesis
ypl00540  Lipopolysaccharide biosynthesis
ypl00541  O-Antigen nucleotide sugar biosynthesis
ypl00542  O-Antigen repeat unit biosynthesis
ypl00543  Exopolysaccharide biosynthesis
ypl00550  Peptidoglycan biosynthesis
ypl00552  Teichoic acid biosynthesis
ypl00561  Glycerolipid metabolism
ypl00562  Inositol phosphate metabolism
ypl00564  Glycerophospholipid metabolism
ypl00565  Ether lipid metabolism
ypl00592  alpha-Linolenic acid metabolism
ypl00600  Sphingolipid metabolism
ypl00620  Pyruvate metabolism
ypl00623  Toluene degradation
ypl00625  Chloroalkane and chloroalkene degradation
ypl00626  Naphthalene degradation
ypl00627  Aminobenzoate degradation
ypl00630  Glyoxylate and dicarboxylate metabolism
ypl00633  Nitrotoluene degradation
ypl00640  Propanoate metabolism
ypl00650  Butanoate metabolism
ypl00660  C5-Branched dibasic acid metabolism
ypl00670  One carbon pool by folate
ypl00680  Methane metabolism
ypl00710  Carbon fixation by Calvin cycle
ypl00720  Other carbon fixation pathways
ypl00730  Thiamine metabolism
ypl00740  Riboflavin metabolism
ypl00750  Vitamin B6 metabolism
ypl00760  Nicotinate and nicotinamide metabolism
ypl00770  Pantothenate and CoA biosynthesis
ypl00780  Biotin metabolism
ypl00785  Lipoic acid metabolism
ypl00790  Folate biosynthesis
ypl00860  Porphyrin metabolism
ypl00900  Terpenoid backbone biosynthesis
ypl00907  Pinene, camphor and geraniol degradation
ypl00910  Nitrogen metabolism
ypl00920  Sulfur metabolism
ypl00930  Caprolactam degradation
ypl00946  Degradation of flavonoids
ypl00997  Biosynthesis of various other secondary metabolites
ypl00999  Biosynthesis of various plant secondary metabolites
ypl01040  Biosynthesis of unsaturated fatty acids
ypl01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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