KEGG   PATHWAY: ypm01100
Entry
ypm01100                    Pathway                                
Name
Metabolic pathways - Yersinia pestis 91001 (biovar Microtus)
Class
Pathway map
ypm01100  Metabolic pathways
ypm01100

Module
ypm_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypm01100]
ypm_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypm01100]
ypm_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypm01100]
ypm_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypm01100]
ypm_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypm01100]
ypm_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypm01100]
ypm_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypm01100]
ypm_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypm01100]
ypm_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypm01100]
ypm_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypm01100]
ypm_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypm01100]
ypm_M00012  Glyoxylate cycle [PATH:ypm01100]
ypm_M00015  Proline biosynthesis, glutamate => proline [PATH:ypm01100]
ypm_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypm01100]
ypm_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypm01100]
ypm_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypm01100]
ypm_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypm01100]
ypm_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypm01100]
ypm_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypm01100]
ypm_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypm01100]
ypm_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypm01100]
ypm_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypm01100]
ypm_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypm01100]
ypm_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypm01100]
ypm_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypm01100]
ypm_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypm01100]
ypm_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypm01100]
ypm_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypm01100]
ypm_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypm01100]
ypm_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypm01100]
ypm_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypm01100]
ypm_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypm01100]
ypm_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypm01100]
ypm_M00063  CMP-KDO biosynthesis [PATH:ypm01100]
ypm_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypm01100]
ypm_M00082  Fatty acid biosynthesis, initiation [PATH:ypm01100]
ypm_M00083  Fatty acid biosynthesis, elongation [PATH:ypm01100]
ypm_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypm01100]
ypm_M00087  beta-Oxidation [PATH:ypm01100]
ypm_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypm01100]
ypm_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypm01100]
ypm_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypm01100]
ypm_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypm01100]
ypm_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypm01100]
ypm_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypm01100]
ypm_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypm01100]
ypm_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypm01100]
ypm_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypm01100]
ypm_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypm01100]
ypm_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypm01100]
ypm_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypm01100]
ypm_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypm01100]
ypm_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypm01100]
ypm_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypm01100]
ypm_M00150  Fumarate reductase, prokaryotes [PATH:ypm01100]
ypm_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypm01100]
ypm_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypm01100]
ypm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypm01100]
ypm_M00417  Cytochrome o ubiquinol oxidase [PATH:ypm01100]
ypm_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypm01100]
ypm_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypm01100]
ypm_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypm01100]
ypm_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypm01100]
ypm_M00555  Betaine biosynthesis, choline => betaine [PATH:ypm01100]
ypm_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypm01100]
ypm_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypm01100]
ypm_M00621  Glycine cleavage system [PATH:ypm01100]
ypm_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypm01100]
ypm_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypm01100]
ypm_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypm01100]
ypm_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypm01100]
ypm_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypm01100]
ypm_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypm01100]
ypm_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypm01100]
ypm_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypm01100]
ypm_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypm01100]
ypm_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypm01100]
ypm_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypm01100]
ypm_M00970  Proline degradation, proline => glutamate [PATH:ypm01100]
Organism
Yersinia pestis 91001 (biovar Microtus) [GN:ypm]
Related
pathway
ypm00010  Glycolysis / Gluconeogenesis
ypm00020  Citrate cycle (TCA cycle)
ypm00030  Pentose phosphate pathway
ypm00040  Pentose and glucuronate interconversions
ypm00051  Fructose and mannose metabolism
ypm00052  Galactose metabolism
ypm00053  Ascorbate and aldarate metabolism
ypm00061  Fatty acid biosynthesis
ypm00071  Fatty acid degradation
ypm00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypm00190  Oxidative phosphorylation
ypm00220  Arginine biosynthesis
ypm00230  Purine metabolism
ypm00240  Pyrimidine metabolism
ypm00250  Alanine, aspartate and glutamate metabolism
ypm00260  Glycine, serine and threonine metabolism
ypm00261  Monobactam biosynthesis
ypm00270  Cysteine and methionine metabolism
ypm00280  Valine, leucine and isoleucine degradation
ypm00290  Valine, leucine and isoleucine biosynthesis
ypm00300  Lysine biosynthesis
ypm00310  Lysine degradation
ypm00330  Arginine and proline metabolism
ypm00332  Carbapenem biosynthesis
ypm00340  Histidine metabolism
ypm00350  Tyrosine metabolism
ypm00360  Phenylalanine metabolism
ypm00361  Chlorocyclohexane and chlorobenzene degradation
ypm00362  Benzoate degradation
ypm00364  Fluorobenzoate degradation
ypm00380  Tryptophan metabolism
ypm00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypm00401  Novobiocin biosynthesis
ypm00410  beta-Alanine metabolism
ypm00430  Taurine and hypotaurine metabolism
ypm00440  Phosphonate and phosphinate metabolism
ypm00450  Selenocompound metabolism
ypm00460  Cyanoamino acid metabolism
ypm00470  D-Amino acid metabolism
ypm00480  Glutathione metabolism
ypm00500  Starch and sucrose metabolism
ypm00511  Other glycan degradation
ypm00520  Amino sugar and nucleotide sugar metabolism
ypm00521  Streptomycin biosynthesis
ypm00523  Polyketide sugar unit biosynthesis
ypm00525  Acarbose and validamycin biosynthesis
ypm00540  Lipopolysaccharide biosynthesis
ypm00541  O-Antigen nucleotide sugar biosynthesis
ypm00542  O-Antigen repeat unit biosynthesis
ypm00543  Exopolysaccharide biosynthesis
ypm00550  Peptidoglycan biosynthesis
ypm00552  Teichoic acid biosynthesis
ypm00561  Glycerolipid metabolism
ypm00562  Inositol phosphate metabolism
ypm00564  Glycerophospholipid metabolism
ypm00565  Ether lipid metabolism
ypm00592  alpha-Linolenic acid metabolism
ypm00600  Sphingolipid metabolism
ypm00620  Pyruvate metabolism
ypm00623  Toluene degradation
ypm00625  Chloroalkane and chloroalkene degradation
ypm00626  Naphthalene degradation
ypm00627  Aminobenzoate degradation
ypm00630  Glyoxylate and dicarboxylate metabolism
ypm00633  Nitrotoluene degradation
ypm00640  Propanoate metabolism
ypm00650  Butanoate metabolism
ypm00660  C5-Branched dibasic acid metabolism
ypm00670  One carbon pool by folate
ypm00680  Methane metabolism
ypm00710  Carbon fixation by Calvin cycle
ypm00720  Other carbon fixation pathways
ypm00730  Thiamine metabolism
ypm00740  Riboflavin metabolism
ypm00750  Vitamin B6 metabolism
ypm00760  Nicotinate and nicotinamide metabolism
ypm00770  Pantothenate and CoA biosynthesis
ypm00780  Biotin metabolism
ypm00785  Lipoic acid metabolism
ypm00790  Folate biosynthesis
ypm00860  Porphyrin metabolism
ypm00900  Terpenoid backbone biosynthesis
ypm00907  Pinene, camphor and geraniol degradation
ypm00910  Nitrogen metabolism
ypm00920  Sulfur metabolism
ypm00930  Caprolactam degradation
ypm00946  Degradation of flavonoids
ypm00997  Biosynthesis of various other secondary metabolites
ypm00999  Biosynthesis of various plant secondary metabolites
ypm01040  Biosynthesis of unsaturated fatty acids
ypm01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
LinkDB

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