PATHWAY: ypt01100 Help Entry ypt01100                    Pathway                                 Name Metabolic pathways - Yersinia pestis A1122 Class BRITE hierarchy Pathway map ypt01100   Metabolic pathways Module ypt_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypt01100] ypt_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ypt01100] ypt_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypt01100] ypt_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypt01100] ypt_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ypt01100] ypt_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypt01100] ypt_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypt01100] ypt_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypt01100] ypt_M00009   Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypt01100] ypt_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypt01100] ypt_M00011   Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypt01100] ypt_M00012   Glyoxylate cycle [PATH:ypt01100] ypt_M00015   Proline biosynthesis, glutamate => proline [PATH:ypt01100] ypt_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypt01100] ypt_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypt01100] ypt_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypt01100] ypt_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ypt01100] ypt_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ypt01100] ypt_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypt01100] ypt_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypt01100] ypt_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypt01100] ypt_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypt01100] ypt_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ypt01100] ypt_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ypt01100] ypt_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypt01100] ypt_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypt01100] ypt_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypt01100] ypt_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypt01100] ypt_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypt01100] ypt_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypt01100] ypt_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypt01100] ypt_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypt01100] ypt_M00063   CMP-KDO biosynthesis [PATH:ypt01100] ypt_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypt01100] ypt_M00082   Fatty acid biosynthesis, initiation [PATH:ypt01100] ypt_M00083   Fatty acid biosynthesis, elongation [PATH:ypt01100] ypt_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ypt01100] ypt_M00087   beta-Oxidation [PATH:ypt01100] ypt_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypt01100] ypt_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypt01100] ypt_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypt01100] ypt_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypt01100] ypt_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ypt01100] ypt_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypt01100] ypt_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypt01100] ypt_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypt01100] ypt_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypt01100] ypt_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypt01100] ypt_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypt01100] ypt_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypt01100] ypt_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypt01100] ypt_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ypt01100] ypt_M00149   Succinate dehydrogenase, prokaryotes [PATH:ypt01100] ypt_M00150   Fumarate reductase, prokaryotes [PATH:ypt01100] ypt_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ypt01100] ypt_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ypt01100] ypt_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ypt01100] ypt_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypt01100] ypt_M00417   Cytochrome o ubiquinol oxidase [PATH:ypt01100] ypt_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypt01100] ypt_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypt01100] ypt_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypt01100] ypt_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypt01100] ypt_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypt01100] ypt_M00555   Betaine biosynthesis, choline => betaine [PATH:ypt01100] ypt_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypt01100] ypt_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypt01100] ypt_M00621   Glycine cleavage system [PATH:ypt01100] ypt_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypt01100] ypt_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypt01100] ypt_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypt01100] ypt_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ypt01100] ypt_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypt01100] ypt_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypt01100] ypt_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:ypt01100] ypt_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypt01100] ypt_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypt01100] ypt_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypt01100] ypt_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:ypt01100] ypt_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypt01100] ypt_M00970   Proline degradation, proline => glutamate [PATH:ypt01100] Organism Yersinia pestis A1122 [GN:ypt] Related pathway ypt00010   Glycolysis / Gluconeogenesis ypt00020   Citrate cycle (TCA cycle) ypt00030   Pentose phosphate pathway ypt00040   Pentose and glucuronate interconversions ypt00051   Fructose and mannose metabolism ypt00052   Galactose metabolism ypt00053   Ascorbate and aldarate metabolism ypt00061   Fatty acid biosynthesis ypt00071   Fatty acid degradation ypt00074   Mycolic acid biosynthesis ypt00130   Ubiquinone and other terpenoid-quinone biosynthesis ypt00190   Oxidative phosphorylation ypt00220   Arginine biosynthesis ypt00230   Purine metabolism ypt00240   Pyrimidine metabolism ypt00250   Alanine, aspartate and glutamate metabolism ypt00260   Glycine, serine and threonine metabolism ypt00261   Monobactam biosynthesis ypt00270   Cysteine and methionine metabolism ypt00280   Valine, leucine and isoleucine degradation ypt00290   Valine, leucine and isoleucine biosynthesis ypt00300   Lysine biosynthesis ypt00310   Lysine degradation ypt00330   Arginine and proline metabolism ypt00332   Carbapenem biosynthesis ypt00340   Histidine metabolism ypt00350   Tyrosine metabolism ypt00360   Phenylalanine metabolism ypt00361   Chlorocyclohexane and chlorobenzene degradation ypt00362   Benzoate degradation ypt00364   Fluorobenzoate degradation ypt00380   Tryptophan metabolism ypt00400   Phenylalanine, tyrosine and tryptophan biosynthesis ypt00401   Novobiocin biosynthesis ypt00410   beta-Alanine metabolism ypt00430   Taurine and hypotaurine metabolism ypt00440   Phosphonate and phosphinate metabolism ypt00450   Selenocompound metabolism ypt00460   Cyanoamino acid metabolism ypt00470   D-Amino acid metabolism ypt00480   Glutathione metabolism ypt00500   Starch and sucrose metabolism ypt00511   Other glycan degradation ypt00520   Amino sugar and nucleotide sugar metabolism ypt00521   Streptomycin biosynthesis ypt00523   Polyketide sugar unit biosynthesis ypt00525   Acarbose and validamycin biosynthesis ypt00540   Lipopolysaccharide biosynthesis ypt00541   O-Antigen nucleotide sugar biosynthesis ypt00542   O-Antigen repeat unit biosynthesis ypt00543   Exopolysaccharide biosynthesis ypt00550   Peptidoglycan biosynthesis ypt00552   Teichoic acid biosynthesis ypt00561   Glycerolipid metabolism ypt00562   Inositol phosphate metabolism ypt00564   Glycerophospholipid metabolism ypt00565   Ether lipid metabolism ypt00592   alpha-Linolenic acid metabolism ypt00600   Sphingolipid metabolism ypt00620   Pyruvate metabolism ypt00623   Toluene degradation ypt00625   Chloroalkane and chloroalkene degradation ypt00626   Naphthalene degradation ypt00627   Aminobenzoate degradation ypt00630   Glyoxylate and dicarboxylate metabolism ypt00633   Nitrotoluene degradation ypt00640   Propanoate metabolism ypt00650   Butanoate metabolism ypt00660   C5-Branched dibasic acid metabolism ypt00670   One carbon pool by folate ypt00680   Methane metabolism ypt00710   Carbon fixation by Calvin cycle ypt00720   Other carbon fixation pathways ypt00730   Thiamine metabolism ypt00740   Riboflavin metabolism ypt00750   Vitamin B6 metabolism ypt00760   Nicotinate and nicotinamide metabolism ypt00770   Pantothenate and CoA biosynthesis ypt00780   Biotin metabolism ypt00785   Lipoic acid metabolism ypt00790   Folate biosynthesis ypt00860   Porphyrin metabolism ypt00900   Terpenoid backbone biosynthesis ypt00907   Pinene, camphor and geraniol degradation ypt00910   Nitrogen metabolism ypt00920   Sulfur metabolism ypt00930   Caprolactam degradation ypt00946   Degradation of flavonoids ypt00997   Biosynthesis of various other secondary metabolites ypt00999   Biosynthesis of various plant secondary metabolites ypt01040   Biosynthesis of unsaturated fatty acids ypt01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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