KEGG   PATHWAY: ypv01100
Entry
ypv01100                    Pathway                                
Name
Metabolic pathways - Yersinia pestis Shasta
Class
Pathway map
ypv01100  Metabolic pathways
ypv01100

Module
ypv_M00001  Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypv01100]
ypv_M00002  Glycolysis, core module involving three-carbon compounds [PATH:ypv01100]
ypv_M00003  Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypv01100]
ypv_M00004  Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypv01100]
ypv_M00005  PRPP biosynthesis, ribose 5P => PRPP [PATH:ypv01100]
ypv_M00006  Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypv01100]
ypv_M00007  Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypv01100]
ypv_M00008  Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypv01100]
ypv_M00009  Citrate cycle (TCA cycle, Krebs cycle) [PATH:ypv01100]
ypv_M00010  Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypv01100]
ypv_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate [PATH:ypv01100]
ypv_M00012  Glyoxylate cycle [PATH:ypv01100]
ypv_M00015  Proline biosynthesis, glutamate => proline [PATH:ypv01100]
ypv_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypv01100]
ypv_M00017  Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypv01100]
ypv_M00018  Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypv01100]
ypv_M00019  Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypv01100]
ypv_M00020  Serine biosynthesis, glycerate-3P => serine [PATH:ypv01100]
ypv_M00021  Cysteine biosynthesis, serine => cysteine [PATH:ypv01100]
ypv_M00022  Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypv01100]
ypv_M00023  Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypv01100]
ypv_M00024  Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypv01100]
ypv_M00025  Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypv01100]
ypv_M00026  Histidine biosynthesis, PRPP => histidine [PATH:ypv01100]
ypv_M00028  Ornithine biosynthesis, glutamate => ornithine [PATH:ypv01100]
ypv_M00045  Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypv01100]
ypv_M00048  De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypv01100]
ypv_M00049  Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypv01100]
ypv_M00050  Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypv01100]
ypv_M00051  De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypv01100]
ypv_M00052  Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypv01100]
ypv_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypv01100]
ypv_M00061  D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypv01100]
ypv_M00063  CMP-KDO biosynthesis [PATH:ypv01100]
ypv_M00064  ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypv01100]
ypv_M00082  Fatty acid biosynthesis, initiation [PATH:ypv01100]
ypv_M00083  Fatty acid biosynthesis, elongation [PATH:ypv01100]
ypv_M00086  beta-Oxidation, acyl-CoA synthesis [PATH:ypv01100]
ypv_M00087  beta-Oxidation [PATH:ypv01100]
ypv_M00093  Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypv01100]
ypv_M00115  NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypv01100]
ypv_M00116  Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypv01100]
ypv_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypv01100]
ypv_M00118  Glutathione biosynthesis, glutamate => glutathione [PATH:ypv01100]
ypv_M00119  Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypv01100]
ypv_M00120  Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypv01100]
ypv_M00121  Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypv01100]
ypv_M00123  Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypv01100]
ypv_M00124  Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypv01100]
ypv_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypv01100]
ypv_M00126  Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypv01100]
ypv_M00127  Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypv01100]
ypv_M00144  NADH:quinone oxidoreductase, prokaryotes [PATH:ypv01100]
ypv_M00149  Succinate dehydrogenase, prokaryotes [PATH:ypv01100]
ypv_M00150  Fumarate reductase, prokaryotes [PATH:ypv01100]
ypv_M00157  F-type ATPase, prokaryotes and chloroplasts [PATH:ypv01100]
ypv_M00168  CAM (Crassulacean acid metabolism), dark [PATH:ypv01100]
ypv_M00176  Assimilatory sulfate reduction, sulfate => H2S [PATH:ypv01100]
ypv_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypv01100]
ypv_M00417  Cytochrome o ubiquinol oxidase [PATH:ypv01100]
ypv_M00432  Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypv01100]
ypv_M00530  Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypv01100]
ypv_M00533  Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypv01100]
ypv_M00549  Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypv01100]
ypv_M00554  Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypv01100]
ypv_M00555  Betaine biosynthesis, choline => betaine [PATH:ypv01100]
ypv_M00570  Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypv01100]
ypv_M00579  Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypv01100]
ypv_M00621  Glycine cleavage system [PATH:ypv01100]
ypv_M00631  D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypv01100]
ypv_M00632  Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypv01100]
ypv_M00761  Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypv01100]
ypv_M00844  Arginine biosynthesis, ornithine => arginine [PATH:ypv01100]
ypv_M00846  Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypv01100]
ypv_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypv01100]
ypv_M00855  Glycogen degradation, glycogen => glucose-6P [PATH:ypv01100]
ypv_M00879  Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypv01100]
ypv_M00880  Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypv01100]
ypv_M00881  Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypv01100]
ypv_M00909  UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypv01100]
ypv_M00918  Aerobactin biosynthesis, lysine => aerobactin [PATH:ypv01100]
ypv_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypv01100]
ypv_M00970  Proline degradation, proline => glutamate [PATH:ypv01100]
Organism
Yersinia pestis Shasta [GN:ypv]
Related
pathway
ypv00010  Glycolysis / Gluconeogenesis
ypv00020  Citrate cycle (TCA cycle)
ypv00030  Pentose phosphate pathway
ypv00040  Pentose and glucuronate interconversions
ypv00051  Fructose and mannose metabolism
ypv00052  Galactose metabolism
ypv00053  Ascorbate and aldarate metabolism
ypv00061  Fatty acid biosynthesis
ypv00071  Fatty acid degradation
ypv00130  Ubiquinone and other terpenoid-quinone biosynthesis
ypv00190  Oxidative phosphorylation
ypv00220  Arginine biosynthesis
ypv00230  Purine metabolism
ypv00240  Pyrimidine metabolism
ypv00250  Alanine, aspartate and glutamate metabolism
ypv00260  Glycine, serine and threonine metabolism
ypv00261  Monobactam biosynthesis
ypv00270  Cysteine and methionine metabolism
ypv00280  Valine, leucine and isoleucine degradation
ypv00290  Valine, leucine and isoleucine biosynthesis
ypv00300  Lysine biosynthesis
ypv00310  Lysine degradation
ypv00330  Arginine and proline metabolism
ypv00332  Carbapenem biosynthesis
ypv00340  Histidine metabolism
ypv00350  Tyrosine metabolism
ypv00360  Phenylalanine metabolism
ypv00361  Chlorocyclohexane and chlorobenzene degradation
ypv00362  Benzoate degradation
ypv00364  Fluorobenzoate degradation
ypv00380  Tryptophan metabolism
ypv00400  Phenylalanine, tyrosine and tryptophan biosynthesis
ypv00401  Novobiocin biosynthesis
ypv00410  beta-Alanine metabolism
ypv00430  Taurine and hypotaurine metabolism
ypv00440  Phosphonate and phosphinate metabolism
ypv00450  Selenocompound metabolism
ypv00460  Cyanoamino acid metabolism
ypv00470  D-Amino acid metabolism
ypv00480  Glutathione metabolism
ypv00500  Starch and sucrose metabolism
ypv00511  Other glycan degradation
ypv00520  Amino sugar and nucleotide sugar metabolism
ypv00521  Streptomycin biosynthesis
ypv00523  Polyketide sugar unit biosynthesis
ypv00525  Acarbose and validamycin biosynthesis
ypv00540  Lipopolysaccharide biosynthesis
ypv00541  O-Antigen nucleotide sugar biosynthesis
ypv00542  O-Antigen repeat unit biosynthesis
ypv00543  Exopolysaccharide biosynthesis
ypv00550  Peptidoglycan biosynthesis
ypv00552  Teichoic acid biosynthesis
ypv00561  Glycerolipid metabolism
ypv00562  Inositol phosphate metabolism
ypv00564  Glycerophospholipid metabolism
ypv00565  Ether lipid metabolism
ypv00592  alpha-Linolenic acid metabolism
ypv00600  Sphingolipid metabolism
ypv00620  Pyruvate metabolism
ypv00623  Toluene degradation
ypv00625  Chloroalkane and chloroalkene degradation
ypv00626  Naphthalene degradation
ypv00627  Aminobenzoate degradation
ypv00630  Glyoxylate and dicarboxylate metabolism
ypv00633  Nitrotoluene degradation
ypv00640  Propanoate metabolism
ypv00650  Butanoate metabolism
ypv00660  C5-Branched dibasic acid metabolism
ypv00670  One carbon pool by folate
ypv00680  Methane metabolism
ypv00710  Carbon fixation by Calvin cycle
ypv00720  Other carbon fixation pathways
ypv00730  Thiamine metabolism
ypv00740  Riboflavin metabolism
ypv00750  Vitamin B6 metabolism
ypv00760  Nicotinate and nicotinamide metabolism
ypv00770  Pantothenate and CoA biosynthesis
ypv00780  Biotin metabolism
ypv00785  Lipoic acid metabolism
ypv00790  Folate biosynthesis
ypv00860  Porphyrin metabolism
ypv00900  Terpenoid backbone biosynthesis
ypv00907  Pinene, camphor and geraniol degradation
ypv00910  Nitrogen metabolism
ypv00920  Sulfur metabolism
ypv00930  Caprolactam degradation
ypv00946  Degradation of flavonoids
ypv00997  Biosynthesis of various other secondary metabolites
ypv00999  Biosynthesis of various plant secondary metabolites
ypv01040  Biosynthesis of unsaturated fatty acids
ypv01053  Biosynthesis of siderophore group nonribosomal peptides
KO pathway
ko01100   
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