PATHWAY: ypw01100 Help Entry ypw01100                    Pathway                                 Name Metabolic pathways - Yersinia pestis PBM19 Class BRITE hierarchy Pathway map ypw01100   Metabolic pathways Module ypw_M00001   Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate [PATH:ypw01100] ypw_M00002   Glycolysis, core module involving three-carbon compounds [PATH:ypw01100] ypw_M00003   Gluconeogenesis, oxaloacetate => fructose-6P [PATH:ypw01100] ypw_M00004   Pentose phosphate pathway (Pentose phosphate cycle) [PATH:ypw01100] ypw_M00005   PRPP biosynthesis, ribose 5P => PRPP [PATH:ypw01100] ypw_M00006   Pentose phosphate pathway, oxidative phase, glucose 6P => ribulose 5P [PATH:ypw01100] ypw_M00007   Pentose phosphate pathway, non-oxidative phase, fructose 6P => ribose 5P [PATH:ypw01100] ypw_M00008   Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate [PATH:ypw01100] ypw_M00010   Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate [PATH:ypw01100] ypw_M00012   Glyoxylate cycle [PATH:ypw01100] ypw_M00015   Proline biosynthesis, glutamate => proline [PATH:ypw01100] ypw_M00016   Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine [PATH:ypw01100] ypw_M00017   Methionine biosynthesis, aspartate => homoserine => methionine [PATH:ypw01100] ypw_M00018   Threonine biosynthesis, aspartate => homoserine => threonine [PATH:ypw01100] ypw_M00019   Valine/isoleucine biosynthesis, pyruvate => valine / 2-oxobutanoate => isoleucine [PATH:ypw01100] ypw_M00020   Serine biosynthesis, glycerate-3P => serine [PATH:ypw01100] ypw_M00021   Cysteine biosynthesis, serine => cysteine [PATH:ypw01100] ypw_M00022   Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate [PATH:ypw01100] ypw_M00023   Tryptophan biosynthesis, chorismate => tryptophan [PATH:ypw01100] ypw_M00024   Phenylalanine biosynthesis, chorismate => phenylpyruvate => phenylalanine [PATH:ypw01100] ypw_M00025   Tyrosine biosynthesis, chorismate => HPP => tyrosine [PATH:ypw01100] ypw_M00026   Histidine biosynthesis, PRPP => histidine [PATH:ypw01100] ypw_M00028   Ornithine biosynthesis, glutamate => ornithine [PATH:ypw01100] ypw_M00045   Histidine degradation, histidine => N-formiminoglutamate => glutamate [PATH:ypw01100] ypw_M00048   De novo purine biosynthesis, PRPP + glutamine => IMP [PATH:ypw01100] ypw_M00049   Adenine ribonucleotide biosynthesis, IMP => ADP,ATP [PATH:ypw01100] ypw_M00050   Guanine ribonucleotide biosynthesis, IMP => GDP,GTP [PATH:ypw01100] ypw_M00051   De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP [PATH:ypw01100] ypw_M00052   Pyrimidine ribonucleotide biosynthesis, UMP => UDP/UTP,CDP/CTP [PATH:ypw01100] ypw_M00053   Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP [PATH:ypw01100] ypw_M00061   D-Glucuronate degradation, D-glucuronate => pyruvate + D-glyceraldehyde 3P [PATH:ypw01100] ypw_M00063   CMP-KDO biosynthesis [PATH:ypw01100] ypw_M00064   ADP-L-glycero-D-manno-heptose biosynthesis [PATH:ypw01100] ypw_M00082   Fatty acid biosynthesis, initiation [PATH:ypw01100] ypw_M00083   Fatty acid biosynthesis, elongation [PATH:ypw01100] ypw_M00086   beta-Oxidation, acyl-CoA synthesis [PATH:ypw01100] ypw_M00087   beta-Oxidation [PATH:ypw01100] ypw_M00093   Phosphatidylethanolamine (PE) biosynthesis, PA => PS => PE [PATH:ypw01100] ypw_M00115   NAD biosynthesis, aspartate => quinolinate => NAD [PATH:ypw01100] ypw_M00116   Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol [PATH:ypw01100] ypw_M00117   Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol [PATH:ypw01100] ypw_M00118   Glutathione biosynthesis, glutamate => glutathione [PATH:ypw01100] ypw_M00119   Pantothenate biosynthesis, valine/L-aspartate => pantothenate [PATH:ypw01100] ypw_M00120   Coenzyme A biosynthesis, pantothenate => CoA [PATH:ypw01100] ypw_M00121   Heme biosynthesis, plants and bacteria, glutamate => heme [PATH:ypw01100] ypw_M00123   Biotin biosynthesis, pimeloyl-ACP/CoA => biotin [PATH:ypw01100] ypw_M00124   Pyridoxal-P biosynthesis, erythrose-4P => pyridoxal-P [PATH:ypw01100] ypw_M00125   Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD [PATH:ypw01100] ypw_M00126   Tetrahydrofolate biosynthesis, GTP => THF [PATH:ypw01100] ypw_M00127   Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP [PATH:ypw01100] ypw_M00144   NADH:quinone oxidoreductase, prokaryotes [PATH:ypw01100] ypw_M00149   Succinate dehydrogenase, prokaryotes [PATH:ypw01100] ypw_M00150   Fumarate reductase, prokaryotes [PATH:ypw01100] ypw_M00157   F-type ATPase, prokaryotes and chloroplasts [PATH:ypw01100] ypw_M00168   CAM (Crassulacean acid metabolism), dark [PATH:ypw01100] ypw_M00176   Assimilatory sulfate reduction, sulfate => H2S [PATH:ypw01100] ypw_M00307   Pyruvate oxidation, pyruvate => acetyl-CoA [PATH:ypw01100] ypw_M00417   Cytochrome o ubiquinol oxidase [PATH:ypw01100] ypw_M00432   Leucine biosynthesis, 2-oxoisovalerate => 2-oxoisocaproate [PATH:ypw01100] ypw_M00530   Dissimilatory nitrate reduction, nitrate => ammonia [PATH:ypw01100] ypw_M00533   Homoprotocatechuate degradation, homoprotocatechuate => 2-oxohept-3-enedioate [PATH:ypw01100] ypw_M00549   Nucleotide sugar biosynthesis, glucose => UDP-glucose [PATH:ypw01100] ypw_M00554   Nucleotide sugar biosynthesis, galactose => UDP-galactose [PATH:ypw01100] ypw_M00555   Betaine biosynthesis, choline => betaine [PATH:ypw01100] ypw_M00570   Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine [PATH:ypw01100] ypw_M00579   Phosphate acetyltransferase-acetate kinase pathway, acetyl-CoA => acetate [PATH:ypw01100] ypw_M00621   Glycine cleavage system [PATH:ypw01100] ypw_M00631   D-Galacturonate degradation (bacteria), D-galacturonate => pyruvate + D-glyceraldehyde 3P [PATH:ypw01100] ypw_M00632   Galactose degradation, Leloir pathway, galactose => alpha-D-glucose-1P [PATH:ypw01100] ypw_M00761   Undecaprenylphosphate alpha-L-Ara4N biosynthesis, UDP-GlcA => undecaprenyl phosphate alpha-L-Ara4N [PATH:ypw01100] ypw_M00844   Arginine biosynthesis, ornithine => arginine [PATH:ypw01100] ypw_M00846   Siroheme biosynthesis, glutamyl-tRNA => siroheme [PATH:ypw01100] ypw_M00854   Glycogen biosynthesis, glucose-1P => glycogen/starch [PATH:ypw01100] ypw_M00855   Glycogen degradation, glycogen => glucose-6P [PATH:ypw01100] ypw_M00879   Arginine succinyltransferase pathway, arginine => glutamate [PATH:ypw01100] ypw_M00880   Molybdenum cofactor biosynthesis, GTP => molybdenum cofactor [PATH:ypw01100] ypw_M00881   Lipoic acid biosynthesis, plants and bacteria, octanoyl-ACP => dihydrolipoyl-E2/H [PATH:ypw01100] ypw_M00909   UDP-N-acetyl-D-glucosamine biosynthesis, prokaryotes, glucose => UDP-GlcNAc [PATH:ypw01100] ypw_M00918   Aerobactin biosynthesis, lysine => aerobactin [PATH:ypw01100] ypw_M00938   Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP [PATH:ypw01100] ypw_M00970   Proline degradation, proline => glutamate [PATH:ypw01100] Organism Yersinia pestis PBM19 [GN:ypw] Related pathway ypw00010   Glycolysis / Gluconeogenesis ypw00020   Citrate cycle (TCA cycle) ypw00030   Pentose phosphate pathway ypw00040   Pentose and glucuronate interconversions ypw00051   Fructose and mannose metabolism ypw00052   Galactose metabolism ypw00053   Ascorbate and aldarate metabolism ypw00061   Fatty acid biosynthesis ypw00071   Fatty acid degradation ypw00130   Ubiquinone and other terpenoid-quinone biosynthesis ypw00190   Oxidative phosphorylation ypw00220   Arginine biosynthesis ypw00230   Purine metabolism ypw00240   Pyrimidine metabolism ypw00250   Alanine, aspartate and glutamate metabolism ypw00260   Glycine, serine and threonine metabolism ypw00261   Monobactam biosynthesis ypw00270   Cysteine and methionine metabolism ypw00280   Valine, leucine and isoleucine degradation ypw00290   Valine, leucine and isoleucine biosynthesis ypw00300   Lysine biosynthesis ypw00310   Lysine degradation ypw00330   Arginine and proline metabolism ypw00332   Carbapenem biosynthesis ypw00340   Histidine metabolism ypw00350   Tyrosine metabolism ypw00360   Phenylalanine metabolism ypw00361   Chlorocyclohexane and chlorobenzene degradation ypw00362   Benzoate degradation ypw00364   Fluorobenzoate degradation ypw00380   Tryptophan metabolism ypw00400   Phenylalanine, tyrosine and tryptophan biosynthesis ypw00401   Novobiocin biosynthesis ypw00410   beta-Alanine metabolism ypw00430   Taurine and hypotaurine metabolism ypw00440   Phosphonate and phosphinate metabolism ypw00450   Selenocompound metabolism ypw00460   Cyanoamino acid metabolism ypw00470   D-Amino acid metabolism ypw00480   Glutathione metabolism ypw00500   Starch and sucrose metabolism ypw00511   Other glycan degradation ypw00520   Amino sugar and nucleotide sugar metabolism ypw00521   Streptomycin biosynthesis ypw00523   Polyketide sugar unit biosynthesis ypw00525   Acarbose and validamycin biosynthesis ypw00540   Lipopolysaccharide biosynthesis ypw00541   O-Antigen nucleotide sugar biosynthesis ypw00542   O-Antigen repeat unit biosynthesis ypw00543   Exopolysaccharide biosynthesis ypw00550   Peptidoglycan biosynthesis ypw00552   Teichoic acid biosynthesis ypw00561   Glycerolipid metabolism ypw00562   Inositol phosphate metabolism ypw00564   Glycerophospholipid metabolism ypw00565   Ether lipid metabolism ypw00592   alpha-Linolenic acid metabolism ypw00600   Sphingolipid metabolism ypw00620   Pyruvate metabolism ypw00623   Toluene degradation ypw00625   Chloroalkane and chloroalkene degradation ypw00626   Naphthalene degradation ypw00627   Aminobenzoate degradation ypw00630   Glyoxylate and dicarboxylate metabolism ypw00633   Nitrotoluene degradation ypw00640   Propanoate metabolism ypw00650   Butanoate metabolism ypw00660   C5-Branched dibasic acid metabolism ypw00670   One carbon pool by folate ypw00680   Methane metabolism ypw00710   Carbon fixation by Calvin cycle ypw00720   Other carbon fixation pathways ypw00730   Thiamine metabolism ypw00740   Riboflavin metabolism ypw00750   Vitamin B6 metabolism ypw00760   Nicotinate and nicotinamide metabolism ypw00770   Pantothenate and CoA biosynthesis ypw00780   Biotin metabolism ypw00785   Lipoic acid metabolism ypw00790   Folate biosynthesis ypw00860   Porphyrin metabolism ypw00900   Terpenoid backbone biosynthesis ypw00907   Pinene, camphor and geraniol degradation ypw00910   Nitrogen metabolism ypw00920   Sulfur metabolism ypw00930   Caprolactam degradation ypw00946   Degradation of flavonoids ypw00997   Biosynthesis of various other secondary metabolites ypw00999   Biosynthesis of various plant secondary metabolites ypw01040   Biosynthesis of unsaturated fatty acids ypw01053   Biosynthesis of siderophore group nonribosomal peptides KO pathway ko01100     LinkDB All DBs

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