Patiriisocius sp. Uisw_017: ABXT67_09800
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Entry
ABXT67_09800 CDS
T11559
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pati Patiriisocius sp. Uisw_017
Pathway
pati03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pati00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABXT67_09800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pati03021
]
ABXT67_09800
03400 DNA repair and recombination proteins [BR:
pati03400
]
ABXT67_09800
Enzymes [BR:
pati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABXT67_09800
Transcription machinery [BR:
pati03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABXT67_09800
DNA repair and recombination proteins [BR:
pati03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABXT67_09800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XOK05750
LinkDB
All DBs
Position
2135634..2136626
Genome browser
AA seq
330 aa
AA seq
DB search
MAVFNFQKPDKVIMINSTDFEGKFEFRPLEPGYGLTIGNALRRVLLSSLEGFAITSIRVE
GVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIDEIDNETVTIAVNGSDTLTAGDFQKYIS
GFQVLNPDLVICNMDAKVTMNMELTIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENFRVEQKTDYEKLVFEIQTDGSIHPKEALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELEELVNVKSLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatttaattttcagaagcctgataaagttatcatgatcaattcaactgatttt
gaggggaaatttgaatttcgtcctttagagccggggtatggattgacgataggtaacgca
ttaagaagagtactactttcttcattagagggatttgcaattacttcaataagagttgaa
ggtgttgatcatgagttttcaacaatcgcaggtgtcgtagaagatgttaccgaaattata
ttaaacctgaagcaagtgcgttttaagcgtcaaatcgatgagattgataatgaaacggta
acaattgctgttaatggtagtgatactttaactgcgggagattttcaaaaatacatctcg
gggtttcaagtattgaatccagatttagttatctgtaatatggatgctaaagtaacgatg
aatatggagctcactatcgaaaaaggtagaggttatgtcccagctgaagagaacaaaaaa
gcaaatgcacctttaggaactatttttacagattctatttacacaccaatcaaaaatgtt
aagtatagcattgaaaattttcgtgtggagcagaagactgattatgagaagctagttttt
gaaatccagacggatggttcaattcatcctaaggaggctttaacggaagctgcaaaaaca
ttaattcatcactttatgttatttagtgatgagcgcattacattagaagctgatgaaatt
gctcaaactgaaacgtatgatgaggaatcattacatatgcgtcagttattgaaaactaag
ttagtagatatggacctttcagtgcgtgctttaaattgtttaaaagctgctgaagtagat
actctaggggatttagtttcgtttaataagaatgatttaatgaagtttagaaacttcggt
aaaaaatcattaacagagttggaagagctcgtaaatgttaagagtcttaacttcggtatg
gacctttcaaaatataaattagataaagattaa
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